Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM238LA0A1B0GVL6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM238LA0A1B0GVL6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM238LA0A1B0GVL6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM238LA0A1B0GVL6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM238LA0A1B0GVL6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM238LA0A1B0GVL6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM238LA0A1B0GVL6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM238LA0A1B0GVL6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM238LA0A1B0GVL6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM238LA0A1B0GVL6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM238LA0A1B0GVL6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TMEM238LA0A1B0GVL6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM238LA0A1B0GVL6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
TMEM238LA0A1B0GVL6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC15.09■□□□□ 0.01
TMEM238LA0A1B0GVL6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
TMEM238LA0A1B0GVL6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM238LA0A1B0GVL6 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM238LA0A1B0GVL6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM238LA0A1B0GVL6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
TMEM238LA0A1B0GVL6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM238LA0A1B0GVL6 AL359504.2-201ENST00000605506 1601 ntBASIC15.09■□□□□ 0.01
TMEM238LA0A1B0GVL6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM238LA0A1B0GVL6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC15.09■□□□□ 0.01
TMEM238LA0A1B0GVL6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TMEM238LA0A1B0GVL6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM238LA0A1B0GVL6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TMEM238LA0A1B0GVL6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM238LA0A1B0GVL6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TMEM238LA0A1B0GVL6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
TMEM238LA0A1B0GVL6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TMEM238LA0A1B0GVL6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.08■□□□□ 0.01
TMEM238LA0A1B0GVL6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC15.08■□□□□ 0.01
TMEM238LA0A1B0GVL6 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM238LA0A1B0GVL6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC15.08■□□□□ 0
TMEM238LA0A1B0GVL6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC15.08■□□□□ 0
TMEM238LA0A1B0GVL6 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM238LA0A1B0GVL6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM238LA0A1B0GVL6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TMEM238LA0A1B0GVL6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM238LA0A1B0GVL6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TMEM238LA0A1B0GVL6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM238LA0A1B0GVL6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.08■□□□□ 0
TMEM238LA0A1B0GVL6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM238LA0A1B0GVL6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM238LA0A1B0GVL6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TMEM238LA0A1B0GVL6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.08■□□□□ 0
TMEM238LA0A1B0GVL6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM238LA0A1B0GVL6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.07■□□□□ 0
TMEM238LA0A1B0GVL6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM238LA0A1B0GVL6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM238LA0A1B0GVL6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.07■□□□□ 0
TMEM238LA0A1B0GVL6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC15.07■□□□□ 0
TMEM238LA0A1B0GVL6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC15.07■□□□□ 0
TMEM238LA0A1B0GVL6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC15.07■□□□□ 0
TMEM238LA0A1B0GVL6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM238LA0A1B0GVL6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC15.07■□□□□ 0
TMEM238LA0A1B0GVL6 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC15.07■□□□□ 0
TMEM238LA0A1B0GVL6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM238LA0A1B0GVL6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.07■□□□□ 0
TMEM238LA0A1B0GVL6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM238LA0A1B0GVL6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC15.07■□□□□ 0
TMEM238LA0A1B0GVL6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM238LA0A1B0GVL6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC15.07■□□□□ 0
TMEM238LA0A1B0GVL6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM238LA0A1B0GVL6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC15.07■□□□□ 0
TMEM238LA0A1B0GVL6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
TMEM238LA0A1B0GVL6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM238LA0A1B0GVL6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC15.06■□□□□ 0
TMEM238LA0A1B0GVL6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM238LA0A1B0GVL6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM238LA0A1B0GVL6 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM238LA0A1B0GVL6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM238LA0A1B0GVL6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.06■□□□□ 0
TMEM238LA0A1B0GVL6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC15.06■□□□□ 0
TMEM238LA0A1B0GVL6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM238LA0A1B0GVL6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM238LA0A1B0GVL6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TMEM238LA0A1B0GVL6 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
TMEM238LA0A1B0GVL6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.06■□□□□ 0
TMEM238LA0A1B0GVL6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.06■□□□□ 0
TMEM238LA0A1B0GVL6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC15.06■□□□□ 0
TMEM238LA0A1B0GVL6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM238LA0A1B0GVL6 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM238LA0A1B0GVL6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM238LA0A1B0GVL6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC15.06■□□□□ 0
TMEM238LA0A1B0GVL6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM238LA0A1B0GVL6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TMEM238LA0A1B0GVL6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC15.06■□□□□ 0
TMEM238LA0A1B0GVL6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM238LA0A1B0GVL6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM238LA0A1B0GVL6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC15.06■□□□□ 0
TMEM238LA0A1B0GVL6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC15.05■□□□□ 0
TMEM238LA0A1B0GVL6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC15.05■□□□□ 0
TMEM238LA0A1B0GVL6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.05■□□□□ 0
TMEM238LA0A1B0GVL6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
TMEM238LA0A1B0GVL6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TMEM238LA0A1B0GVL6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TMEM238LA0A1B0GVL6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TMEM238LA0A1B0GVL6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms