Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.52■■■□□ 2
PCDHGC4Q9Y5F7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC27.52■■■□□ 2
PCDHGC4Q9Y5F7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
PCDHGC4Q9Y5F7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
PCDHGC4Q9Y5F7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
PCDHGC4Q9Y5F7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
PCDHGC4Q9Y5F7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.49■■□□□ 1.99
PCDHGC4Q9Y5F7 WASH5P-204ENST00000632292 975 ntBASIC27.47■■□□□ 1.99
PCDHGC4Q9Y5F7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
PCDHGC4Q9Y5F7 AL391121.1-201ENST00000607967 1349 ntBASIC27.46■■□□□ 1.99
PCDHGC4Q9Y5F7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
PCDHGC4Q9Y5F7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
PCDHGC4Q9Y5F7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDHGC4Q9Y5F7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
PCDHGC4Q9Y5F7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PCDHGC4Q9Y5F7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
PCDHGC4Q9Y5F7 SUZ12P1-203ENST00000578195 985 ntBASIC27.41■■□□□ 1.98
PCDHGC4Q9Y5F7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PCDHGC4Q9Y5F7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC27.4■■□□□ 1.98
PCDHGC4Q9Y5F7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PCDHGC4Q9Y5F7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PCDHGC4Q9Y5F7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC27.38■■□□□ 1.97
PCDHGC4Q9Y5F7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
PCDHGC4Q9Y5F7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCDHGC4Q9Y5F7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
PCDHGC4Q9Y5F7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHGC4Q9Y5F7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHGC4Q9Y5F7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHGC4Q9Y5F7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC27.35■■□□□ 1.97
PCDHGC4Q9Y5F7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHGC4Q9Y5F7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHGC4Q9Y5F7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC27.34■■□□□ 1.97
PCDHGC4Q9Y5F7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
PCDHGC4Q9Y5F7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHGC4Q9Y5F7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHGC4Q9Y5F7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHGC4Q9Y5F7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC27.29■■□□□ 1.96
PCDHGC4Q9Y5F7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHGC4Q9Y5F7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC27.28■■□□□ 1.96
PCDHGC4Q9Y5F7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.28■■□□□ 1.96
PCDHGC4Q9Y5F7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.26■■□□□ 1.95
PCDHGC4Q9Y5F7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
PCDHGC4Q9Y5F7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.25■■□□□ 1.95
PCDHGC4Q9Y5F7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHGC4Q9Y5F7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHGC4Q9Y5F7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
PCDHGC4Q9Y5F7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHGC4Q9Y5F7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHGC4Q9Y5F7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHGC4Q9Y5F7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHGC4Q9Y5F7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHGC4Q9Y5F7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHGC4Q9Y5F7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
PCDHGC4Q9Y5F7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
PCDHGC4Q9Y5F7 AL161658.1-201ENST00000623641 1967 ntBASIC27.17■■□□□ 1.94
PCDHGC4Q9Y5F7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
PCDHGC4Q9Y5F7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.17■■□□□ 1.94
PCDHGC4Q9Y5F7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
PCDHGC4Q9Y5F7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHGC4Q9Y5F7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHGC4Q9Y5F7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
PCDHGC4Q9Y5F7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.15■■□□□ 1.94
PCDHGC4Q9Y5F7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHGC4Q9Y5F7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
PCDHGC4Q9Y5F7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHGC4Q9Y5F7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHGC4Q9Y5F7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHGC4Q9Y5F7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.13■■□□□ 1.93
PCDHGC4Q9Y5F7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
PCDHGC4Q9Y5F7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHGC4Q9Y5F7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PCDHGC4Q9Y5F7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PCDHGC4Q9Y5F7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.09■■□□□ 1.93
PCDHGC4Q9Y5F7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.09■■□□□ 1.93
PCDHGC4Q9Y5F7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.09■■□□□ 1.93
PCDHGC4Q9Y5F7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHGC4Q9Y5F7 MIR762-201ENST00000390236 83 ntBASIC27.08■■□□□ 1.93
PCDHGC4Q9Y5F7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHGC4Q9Y5F7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
PCDHGC4Q9Y5F7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHGC4Q9Y5F7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC27.07■■□□□ 1.92
PCDHGC4Q9Y5F7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC27.07■■□□□ 1.92
PCDHGC4Q9Y5F7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHGC4Q9Y5F7 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.06■■□□□ 1.92
PCDHGC4Q9Y5F7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHGC4Q9Y5F7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHGC4Q9Y5F7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.05■■□□□ 1.92
PCDHGC4Q9Y5F7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.05■■□□□ 1.92
PCDHGC4Q9Y5F7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PCDHGC4Q9Y5F7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
PCDHGC4Q9Y5F7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PCDHGC4Q9Y5F7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PCDHGC4Q9Y5F7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHGC4Q9Y5F7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHGC4Q9Y5F7 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.04■■□□□ 1.92
PCDHGC4Q9Y5F7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.03■■□□□ 1.92
PCDHGC4Q9Y5F7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.03■■□□□ 1.92
PCDHGC4Q9Y5F7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.03■■□□□ 1.92
PCDHGC4Q9Y5F7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
PCDHGC4Q9Y5F7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms