Protein–RNA interactions for Protein: Q99848

EBNA1BP2, Probable rRNA-processing protein EBP2, humanhuman

Known RBP Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBNA1BP2Q99848 ABCB10P1-201ENST00000614297 2181 ntBASIC27.52■■■□□ 2
EBNA1BP2Q99848 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC27.51■■□□□ 1.99
EBNA1BP2Q99848 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.49■■□□□ 1.99
EBNA1BP2Q99848 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
EBNA1BP2Q99848 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC27.48■■□□□ 1.99
EBNA1BP2Q99848 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.48■■□□□ 1.99
EBNA1BP2Q99848 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC27.47■■□□□ 1.99
EBNA1BP2Q99848 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
EBNA1BP2Q99848 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
EBNA1BP2Q99848 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC27.42■■□□□ 1.98
EBNA1BP2Q99848 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
EBNA1BP2Q99848 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
EBNA1BP2Q99848 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.38■■□□□ 1.97
EBNA1BP2Q99848 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
EBNA1BP2Q99848 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
EBNA1BP2Q99848 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
EBNA1BP2Q99848 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.37■■□□□ 1.97
EBNA1BP2Q99848 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
EBNA1BP2Q99848 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
EBNA1BP2Q99848 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
EBNA1BP2Q99848 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC27.35■■□□□ 1.97
EBNA1BP2Q99848 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
EBNA1BP2Q99848 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
EBNA1BP2Q99848 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
EBNA1BP2Q99848 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
EBNA1BP2Q99848 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.31■■□□□ 1.96
EBNA1BP2Q99848 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
EBNA1BP2Q99848 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
EBNA1BP2Q99848 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.29■■□□□ 1.96
EBNA1BP2Q99848 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
EBNA1BP2Q99848 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.28■■□□□ 1.96
EBNA1BP2Q99848 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
EBNA1BP2Q99848 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC27.28■■□□□ 1.96
EBNA1BP2Q99848 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
EBNA1BP2Q99848 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
EBNA1BP2Q99848 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
EBNA1BP2Q99848 AL161658.1-201ENST00000623641 1967 ntBASIC27.27■■□□□ 1.96
EBNA1BP2Q99848 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.27■■□□□ 1.96
EBNA1BP2Q99848 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
EBNA1BP2Q99848 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
EBNA1BP2Q99848 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
EBNA1BP2Q99848 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.26■■□□□ 1.95
EBNA1BP2Q99848 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
EBNA1BP2Q99848 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC27.25■■□□□ 1.95
EBNA1BP2Q99848 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
EBNA1BP2Q99848 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
EBNA1BP2Q99848 ABCB10P3-201ENST00000561950 2166 ntBASIC27.24■■□□□ 1.95
EBNA1BP2Q99848 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
EBNA1BP2Q99848 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC27.24■■□□□ 1.95
EBNA1BP2Q99848 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
EBNA1BP2Q99848 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
EBNA1BP2Q99848 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
EBNA1BP2Q99848 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC27.22■■□□□ 1.95
EBNA1BP2Q99848 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
EBNA1BP2Q99848 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.22■■□□□ 1.95
EBNA1BP2Q99848 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
EBNA1BP2Q99848 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
EBNA1BP2Q99848 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.94
EBNA1BP2Q99848 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
EBNA1BP2Q99848 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
EBNA1BP2Q99848 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
EBNA1BP2Q99848 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
EBNA1BP2Q99848 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
EBNA1BP2Q99848 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
EBNA1BP2Q99848 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
EBNA1BP2Q99848 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
EBNA1BP2Q99848 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
EBNA1BP2Q99848 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
EBNA1BP2Q99848 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC27.17■■□□□ 1.94
EBNA1BP2Q99848 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
EBNA1BP2Q99848 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
EBNA1BP2Q99848 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC27.16■■□□□ 1.94
EBNA1BP2Q99848 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC27.16■■□□□ 1.94
EBNA1BP2Q99848 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
EBNA1BP2Q99848 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.15■■□□□ 1.94
EBNA1BP2Q99848 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
EBNA1BP2Q99848 ST7-AS1-201ENST00000456775 1889 ntBASIC27.15■■□□□ 1.94
EBNA1BP2Q99848 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
EBNA1BP2Q99848 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
EBNA1BP2Q99848 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
EBNA1BP2Q99848 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
EBNA1BP2Q99848 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
EBNA1BP2Q99848 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
EBNA1BP2Q99848 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
EBNA1BP2Q99848 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
EBNA1BP2Q99848 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
EBNA1BP2Q99848 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
EBNA1BP2Q99848 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
EBNA1BP2Q99848 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
EBNA1BP2Q99848 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
EBNA1BP2Q99848 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
EBNA1BP2Q99848 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
EBNA1BP2Q99848 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
EBNA1BP2Q99848 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
EBNA1BP2Q99848 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
EBNA1BP2Q99848 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
EBNA1BP2Q99848 AC139426.1-201ENST00000568218 2529 ntBASIC27.03■■□□□ 1.92
EBNA1BP2Q99848 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
EBNA1BP2Q99848 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
EBNA1BP2Q99848 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms