Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC32.84■■■□□ 2.85
CDCA5Q96FF9 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC32.83■■■□□ 2.85
CDCA5Q96FF9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC32.82■■■□□ 2.84
CDCA5Q96FF9 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC32.82■■■□□ 2.84
CDCA5Q96FF9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
CDCA5Q96FF9 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC32.81■■■□□ 2.84
CDCA5Q96FF9 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC32.8■■■□□ 2.84
CDCA5Q96FF9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC32.8■■■□□ 2.84
CDCA5Q96FF9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC32.8■■■□□ 2.84
CDCA5Q96FF9 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
CDCA5Q96FF9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC32.79■■■□□ 2.84
CDCA5Q96FF9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC32.78■■■□□ 2.84
CDCA5Q96FF9 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC32.77■■■□□ 2.84
CDCA5Q96FF9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
CDCA5Q96FF9 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC32.77■■■□□ 2.84
CDCA5Q96FF9 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
CDCA5Q96FF9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
CDCA5Q96FF9 WASH5P-204ENST00000632292 975 ntBASIC32.73■■■□□ 2.83
CDCA5Q96FF9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC32.73■■■□□ 2.83
CDCA5Q96FF9 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CDCA5Q96FF9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
CDCA5Q96FF9 RPS2-209ENST00000529806 993 ntTSL 3 BASIC32.71■■■□□ 2.83
CDCA5Q96FF9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
CDCA5Q96FF9 DUX4L29-201ENST00000425409 679 ntBASIC32.69■■■□□ 2.82
CDCA5Q96FF9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CDCA5Q96FF9 MIR4449-201ENST00000578365 66 ntBASIC32.68■■■□□ 2.82
CDCA5Q96FF9 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC32.66■■■□□ 2.82
CDCA5Q96FF9 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
CDCA5Q96FF9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CDCA5Q96FF9 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
CDCA5Q96FF9 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC32.62■■■□□ 2.81
CDCA5Q96FF9 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
CDCA5Q96FF9 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CDCA5Q96FF9 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
CDCA5Q96FF9 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
CDCA5Q96FF9 MIR639-201ENST00000384974 98 ntBASIC32.59■■■□□ 2.81
CDCA5Q96FF9 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC32.59■■■□□ 2.81
CDCA5Q96FF9 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CDCA5Q96FF9 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC32.57■■■□□ 2.8
CDCA5Q96FF9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC32.57■■■□□ 2.8
CDCA5Q96FF9 AC021231.2-201ENST00000594613 730 ntBASIC32.56■■■□□ 2.8
CDCA5Q96FF9 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC32.56■■■□□ 2.8
CDCA5Q96FF9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
CDCA5Q96FF9 MACF1-219ENST00000484793 834 ntTSL 2 BASIC32.55■■■□□ 2.8
CDCA5Q96FF9 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
CDCA5Q96FF9 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
CDCA5Q96FF9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC32.52■■■□□ 2.8
CDCA5Q96FF9 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC32.51■■■□□ 2.79
CDCA5Q96FF9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
CDCA5Q96FF9 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CDCA5Q96FF9 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CDCA5Q96FF9 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC32.48■■■□□ 2.79
CDCA5Q96FF9 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
CDCA5Q96FF9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC32.44■■■□□ 2.78
CDCA5Q96FF9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC32.43■■■□□ 2.78
CDCA5Q96FF9 CIB2-204ENST00000557846 934 ntTSL 3 BASIC32.43■■■□□ 2.78
CDCA5Q96FF9 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC32.43■■■□□ 2.78
CDCA5Q96FF9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC32.42■■■□□ 2.78
CDCA5Q96FF9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
CDCA5Q96FF9 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC32.41■■■□□ 2.78
CDCA5Q96FF9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
CDCA5Q96FF9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CDCA5Q96FF9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CDCA5Q96FF9 MIR3648-2-201ENST00000581792 180 ntBASIC32.4■■■□□ 2.78
CDCA5Q96FF9 AC016575.1-201ENST00000607026 382 ntBASIC32.4■■■□□ 2.78
CDCA5Q96FF9 MIR3648-1-201ENST00000615959 180 ntBASIC32.4■■■□□ 2.78
CDCA5Q96FF9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CDCA5Q96FF9 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CDCA5Q96FF9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC32.39■■■□□ 2.78
CDCA5Q96FF9 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
CDCA5Q96FF9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC32.38■■■□□ 2.77
CDCA5Q96FF9 HSD17B1P1-201ENST00000590052 955 ntBASIC32.38■■■□□ 2.77
CDCA5Q96FF9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC32.37■■■□□ 2.77
CDCA5Q96FF9 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
CDCA5Q96FF9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
CDCA5Q96FF9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC32.34■■■□□ 2.77
CDCA5Q96FF9 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC32.34■■■□□ 2.77
CDCA5Q96FF9 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.34■■■□□ 2.77
CDCA5Q96FF9 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.77
CDCA5Q96FF9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CDCA5Q96FF9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC32.3■■■□□ 2.76
CDCA5Q96FF9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC32.29■■■□□ 2.76
CDCA5Q96FF9 MIR6090-201ENST00000622481 60 ntBASIC32.29■■■□□ 2.76
CDCA5Q96FF9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC32.27■■■□□ 2.76
CDCA5Q96FF9 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
CDCA5Q96FF9 AC108673.1-201ENST00000510422 1159 ntBASIC32.26■■■□□ 2.75
CDCA5Q96FF9 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC32.26■■■□□ 2.75
CDCA5Q96FF9 CR559946.2-201ENST00000623684 991 ntBASIC32.25■■■□□ 2.75
CDCA5Q96FF9 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
CDCA5Q96FF9 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC32.25■■■□□ 2.75
CDCA5Q96FF9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC32.24■■■□□ 2.75
CDCA5Q96FF9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC32.24■■■□□ 2.75
CDCA5Q96FF9 DUX4L11-201ENST00000611504 1267 ntBASIC32.24■■■□□ 2.75
CDCA5Q96FF9 DUX4L12-201ENST00000614593 1267 ntBASIC32.24■■■□□ 2.75
CDCA5Q96FF9 DUX4L14-201ENST00000621227 1267 ntBASIC32.24■■■□□ 2.75
CDCA5Q96FF9 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CDCA5Q96FF9 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
CDCA5Q96FF9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC32.22■■■□□ 2.75
CDCA5Q96FF9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC32.21■■■□□ 2.75
CDCA5Q96FF9 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC32.2■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms