Protein–RNA interactions for Protein: Q8TBB1

LNX1, E3 ubiquitin-protein ligase LNX, humanhuman

Predicted RBP Predictions only

Length 728 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNX1Q8TBB1 AL391121.1-201ENST00000607967 1349 ntBASIC29.73■■■□□ 2.35
LNX1Q8TBB1 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
LNX1Q8TBB1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC29.72■■■□□ 2.35
LNX1Q8TBB1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC29.71■■■□□ 2.35
LNX1Q8TBB1 RPS2P35-201ENST00000443417 897 ntBASIC29.7■■■□□ 2.35
LNX1Q8TBB1 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
LNX1Q8TBB1 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
LNX1Q8TBB1 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
LNX1Q8TBB1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC29.65■■■□□ 2.34
LNX1Q8TBB1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
LNX1Q8TBB1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
LNX1Q8TBB1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
LNX1Q8TBB1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
LNX1Q8TBB1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.63■■■□□ 2.33
LNX1Q8TBB1 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
LNX1Q8TBB1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
LNX1Q8TBB1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
LNX1Q8TBB1 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
LNX1Q8TBB1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.61■■■□□ 2.33
LNX1Q8TBB1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
LNX1Q8TBB1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
LNX1Q8TBB1 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
LNX1Q8TBB1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC29.58■■■□□ 2.33
LNX1Q8TBB1 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC29.57■■■□□ 2.32
LNX1Q8TBB1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC29.57■■■□□ 2.32
LNX1Q8TBB1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.57■■■□□ 2.32
LNX1Q8TBB1 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
LNX1Q8TBB1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.56■■■□□ 2.32
LNX1Q8TBB1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
LNX1Q8TBB1 AC120057.4-201ENST00000624722 1615 ntBASIC29.53■■■□□ 2.32
LNX1Q8TBB1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
LNX1Q8TBB1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC29.53■■■□□ 2.32
LNX1Q8TBB1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
LNX1Q8TBB1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
LNX1Q8TBB1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
LNX1Q8TBB1 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
LNX1Q8TBB1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.52■■■□□ 2.32
LNX1Q8TBB1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
LNX1Q8TBB1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC29.52■■■□□ 2.32
LNX1Q8TBB1 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
LNX1Q8TBB1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
LNX1Q8TBB1 AL162393.1-201ENST00000437852 946 ntBASIC29.51■■■□□ 2.31
LNX1Q8TBB1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.51■■■□□ 2.31
LNX1Q8TBB1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
LNX1Q8TBB1 AP006261.1-201ENST00000584783 668 ntBASIC29.48■■■□□ 2.31
LNX1Q8TBB1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.47■■■□□ 2.31
LNX1Q8TBB1 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC29.46■■■□□ 2.31
LNX1Q8TBB1 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
LNX1Q8TBB1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
LNX1Q8TBB1 HNRNPLP2-201ENST00000568980 1570 ntBASIC29.44■■■□□ 2.3
LNX1Q8TBB1 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
LNX1Q8TBB1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC29.43■■■□□ 2.3
LNX1Q8TBB1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
LNX1Q8TBB1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
LNX1Q8TBB1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC29.41■■■□□ 2.3
LNX1Q8TBB1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
LNX1Q8TBB1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
LNX1Q8TBB1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
LNX1Q8TBB1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
LNX1Q8TBB1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.39■■■□□ 2.3
LNX1Q8TBB1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
LNX1Q8TBB1 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
LNX1Q8TBB1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC29.38■■■□□ 2.29
LNX1Q8TBB1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
LNX1Q8TBB1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
LNX1Q8TBB1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
LNX1Q8TBB1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC29.35■■■□□ 2.29
LNX1Q8TBB1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
LNX1Q8TBB1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
LNX1Q8TBB1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.32■■■□□ 2.28
LNX1Q8TBB1 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
LNX1Q8TBB1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
LNX1Q8TBB1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
LNX1Q8TBB1 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
LNX1Q8TBB1 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
LNX1Q8TBB1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC29.31■■■□□ 2.28
LNX1Q8TBB1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC29.3■■■□□ 2.28
LNX1Q8TBB1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.28■■■□□ 2.28
LNX1Q8TBB1 MIR3665-201ENST00000578708 105 ntBASIC29.28■■■□□ 2.28
LNX1Q8TBB1 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
LNX1Q8TBB1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
LNX1Q8TBB1 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
LNX1Q8TBB1 MIR762-201ENST00000390236 83 ntBASIC29.26■■■□□ 2.27
LNX1Q8TBB1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
LNX1Q8TBB1 CHML-205ENST00000638160 705 ntTSL 3 BASIC29.25■■■□□ 2.27
LNX1Q8TBB1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
LNX1Q8TBB1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
LNX1Q8TBB1 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC29.24■■■□□ 2.27
LNX1Q8TBB1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
LNX1Q8TBB1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
LNX1Q8TBB1 DUX4L28-201ENST00000623687 678 ntBASIC29.22■■■□□ 2.27
LNX1Q8TBB1 WASH5P-204ENST00000632292 975 ntBASIC29.21■■■□□ 2.27
LNX1Q8TBB1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
LNX1Q8TBB1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
LNX1Q8TBB1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
LNX1Q8TBB1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
LNX1Q8TBB1 AC087741.3-201ENST00000624270 1347 ntBASIC29.18■■■□□ 2.26
LNX1Q8TBB1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
LNX1Q8TBB1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
LNX1Q8TBB1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.16■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms