Protein–RNA interactions for Protein: Q8NC56

LEMD2, LEM domain-containing protein 2, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2Q8NC56 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC28.6■■■□□ 2.17
LEMD2Q8NC56 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
LEMD2Q8NC56 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
LEMD2Q8NC56 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
LEMD2Q8NC56 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
LEMD2Q8NC56 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
LEMD2Q8NC56 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
LEMD2Q8NC56 ABHD17AP4-201ENST00000411545 909 ntBASIC28.56■■■□□ 2.16
LEMD2Q8NC56 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
LEMD2Q8NC56 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
LEMD2Q8NC56 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
LEMD2Q8NC56 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
LEMD2Q8NC56 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC28.53■■■□□ 2.16
LEMD2Q8NC56 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
LEMD2Q8NC56 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
LEMD2Q8NC56 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
LEMD2Q8NC56 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC28.51■■■□□ 2.15
LEMD2Q8NC56 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.5■■■□□ 2.15
LEMD2Q8NC56 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
LEMD2Q8NC56 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
LEMD2Q8NC56 RPS2-209ENST00000529806 993 ntTSL 3 BASIC28.47■■■□□ 2.15
LEMD2Q8NC56 MIR7108-201ENST00000614319 87 ntBASIC28.47■■■□□ 2.15
LEMD2Q8NC56 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
LEMD2Q8NC56 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
LEMD2Q8NC56 BOD1-206ENST00000480951 814 ntTSL 2 BASIC28.46■■■□□ 2.15
LEMD2Q8NC56 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC28.45■■■□□ 2.15
LEMD2Q8NC56 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC28.45■■■□□ 2.14
LEMD2Q8NC56 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
LEMD2Q8NC56 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
LEMD2Q8NC56 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
LEMD2Q8NC56 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
LEMD2Q8NC56 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
LEMD2Q8NC56 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC28.43■■■□□ 2.14
LEMD2Q8NC56 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
LEMD2Q8NC56 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
LEMD2Q8NC56 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
LEMD2Q8NC56 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
LEMD2Q8NC56 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
LEMD2Q8NC56 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
LEMD2Q8NC56 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
LEMD2Q8NC56 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.41■■■□□ 2.14
LEMD2Q8NC56 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
LEMD2Q8NC56 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
LEMD2Q8NC56 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
LEMD2Q8NC56 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC28.38■■■□□ 2.13
LEMD2Q8NC56 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.38■■■□□ 2.13
LEMD2Q8NC56 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
LEMD2Q8NC56 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.37■■■□□ 2.13
LEMD2Q8NC56 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.37■■■□□ 2.13
LEMD2Q8NC56 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.36■■■□□ 2.13
LEMD2Q8NC56 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC28.35■■■□□ 2.13
LEMD2Q8NC56 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
LEMD2Q8NC56 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC28.33■■■□□ 2.13
LEMD2Q8NC56 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
LEMD2Q8NC56 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
LEMD2Q8NC56 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.29■■■□□ 2.12
LEMD2Q8NC56 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
LEMD2Q8NC56 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.28■■■□□ 2.12
LEMD2Q8NC56 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
LEMD2Q8NC56 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
LEMD2Q8NC56 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.27■■■□□ 2.12
LEMD2Q8NC56 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
LEMD2Q8NC56 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
LEMD2Q8NC56 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
LEMD2Q8NC56 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC28.26■■■□□ 2.11
LEMD2Q8NC56 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
LEMD2Q8NC56 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
LEMD2Q8NC56 ZNRF2P2-203ENST00000454624 420 ntBASIC28.25■■■□□ 2.11
LEMD2Q8NC56 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
LEMD2Q8NC56 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
LEMD2Q8NC56 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
LEMD2Q8NC56 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC28.23■■■□□ 2.11
LEMD2Q8NC56 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.23■■■□□ 2.11
LEMD2Q8NC56 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
LEMD2Q8NC56 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
LEMD2Q8NC56 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC28.21■■■□□ 2.11
LEMD2Q8NC56 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC28.21■■■□□ 2.11
LEMD2Q8NC56 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.21■■■□□ 2.11
LEMD2Q8NC56 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
LEMD2Q8NC56 DUX4L29-201ENST00000425409 679 ntBASIC28.2■■■□□ 2.1
LEMD2Q8NC56 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC28.2■■■□□ 2.1
LEMD2Q8NC56 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC28.19■■■□□ 2.1
LEMD2Q8NC56 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
LEMD2Q8NC56 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
LEMD2Q8NC56 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC28.19■■■□□ 2.1
LEMD2Q8NC56 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.18■■■□□ 2.1
LEMD2Q8NC56 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.17■■■□□ 2.1
LEMD2Q8NC56 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
LEMD2Q8NC56 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
LEMD2Q8NC56 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
LEMD2Q8NC56 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
LEMD2Q8NC56 AC108673.1-201ENST00000510422 1159 ntBASIC28.15■■■□□ 2.1
LEMD2Q8NC56 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
LEMD2Q8NC56 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.14■■■□□ 2.1
LEMD2Q8NC56 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
LEMD2Q8NC56 HLA-V-202ENST00000446817 847 ntBASIC28.14■■■□□ 2.1
LEMD2Q8NC56 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC28.14■■■□□ 2.09
LEMD2Q8NC56 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
LEMD2Q8NC56 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC28.13■■■□□ 2.09
LEMD2Q8NC56 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms