Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
EXD3Q8N9H8 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
EXD3Q8N9H8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.73■■□□□ 1.71
EXD3Q8N9H8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
EXD3Q8N9H8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.72■■□□□ 1.71
EXD3Q8N9H8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
EXD3Q8N9H8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
EXD3Q8N9H8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
EXD3Q8N9H8 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
EXD3Q8N9H8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.68■■□□□ 1.7
EXD3Q8N9H8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.68■■□□□ 1.7
EXD3Q8N9H8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
EXD3Q8N9H8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.67■■□□□ 1.7
EXD3Q8N9H8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.67■■□□□ 1.7
EXD3Q8N9H8 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
EXD3Q8N9H8 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
EXD3Q8N9H8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
EXD3Q8N9H8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
EXD3Q8N9H8 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
EXD3Q8N9H8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
EXD3Q8N9H8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
EXD3Q8N9H8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
EXD3Q8N9H8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
EXD3Q8N9H8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.6■■□□□ 1.69
EXD3Q8N9H8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.6■■□□□ 1.69
EXD3Q8N9H8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.59■■□□□ 1.69
EXD3Q8N9H8 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
EXD3Q8N9H8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
EXD3Q8N9H8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.57■■□□□ 1.68
EXD3Q8N9H8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
EXD3Q8N9H8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
EXD3Q8N9H8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
EXD3Q8N9H8 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
EXD3Q8N9H8 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.52■■□□□ 1.68
EXD3Q8N9H8 MIR4449-201ENST00000578365 66 ntBASIC25.52■■□□□ 1.68
EXD3Q8N9H8 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
EXD3Q8N9H8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
EXD3Q8N9H8 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
EXD3Q8N9H8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.5■■□□□ 1.67
EXD3Q8N9H8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.5■■□□□ 1.67
EXD3Q8N9H8 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC25.49■■□□□ 1.67
EXD3Q8N9H8 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
EXD3Q8N9H8 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC25.49■■□□□ 1.67
EXD3Q8N9H8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
EXD3Q8N9H8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
EXD3Q8N9H8 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
EXD3Q8N9H8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.47■■□□□ 1.67
EXD3Q8N9H8 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
EXD3Q8N9H8 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.46■■□□□ 1.67
EXD3Q8N9H8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
EXD3Q8N9H8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
EXD3Q8N9H8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.44■■□□□ 1.66
EXD3Q8N9H8 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
EXD3Q8N9H8 MIR639-201ENST00000384974 98 ntBASIC25.41■■□□□ 1.66
EXD3Q8N9H8 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
EXD3Q8N9H8 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
EXD3Q8N9H8 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.41■■□□□ 1.66
EXD3Q8N9H8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.4■■□□□ 1.66
EXD3Q8N9H8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
EXD3Q8N9H8 DUX4L29-201ENST00000425409 679 ntBASIC25.4■■□□□ 1.66
EXD3Q8N9H8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
EXD3Q8N9H8 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
EXD3Q8N9H8 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
EXD3Q8N9H8 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
EXD3Q8N9H8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.37■■□□□ 1.65
EXD3Q8N9H8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
EXD3Q8N9H8 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
EXD3Q8N9H8 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
EXD3Q8N9H8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
EXD3Q8N9H8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
EXD3Q8N9H8 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
EXD3Q8N9H8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.34■■□□□ 1.65
EXD3Q8N9H8 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
EXD3Q8N9H8 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
EXD3Q8N9H8 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC25.33■■□□□ 1.65
EXD3Q8N9H8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.32■■□□□ 1.64
EXD3Q8N9H8 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC25.32■■□□□ 1.64
EXD3Q8N9H8 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
EXD3Q8N9H8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
EXD3Q8N9H8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.3■■□□□ 1.64
EXD3Q8N9H8 HSD17B1P1-201ENST00000590052 955 ntBASIC25.3■■□□□ 1.64
EXD3Q8N9H8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.29■■□□□ 1.64
EXD3Q8N9H8 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.29■■□□□ 1.64
EXD3Q8N9H8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
EXD3Q8N9H8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
EXD3Q8N9H8 AC021231.2-201ENST00000594613 730 ntBASIC25.28■■□□□ 1.64
EXD3Q8N9H8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.27■■□□□ 1.64
EXD3Q8N9H8 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.26■■□□□ 1.63
EXD3Q8N9H8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
EXD3Q8N9H8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.26■■□□□ 1.63
EXD3Q8N9H8 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.25■■□□□ 1.63
EXD3Q8N9H8 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
EXD3Q8N9H8 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
EXD3Q8N9H8 WASH5P-204ENST00000632292 975 ntBASIC25.24■■□□□ 1.63
EXD3Q8N9H8 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
EXD3Q8N9H8 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
EXD3Q8N9H8 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
EXD3Q8N9H8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
EXD3Q8N9H8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.23■■□□□ 1.63
EXD3Q8N9H8 AC016575.1-201ENST00000607026 382 ntBASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms