Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC40.08■■■■■ 4.01
UBR1Q8IWV7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC40.08■■■■■ 4.01
UBR1Q8IWV7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC40.08■■■■■ 4.01
UBR1Q8IWV7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC40.07■■■■■ 4.01
UBR1Q8IWV7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC40.06■■■■■ 4
UBR1Q8IWV7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC40.03■■■■■ 4
UBR1Q8IWV7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC40.03■■■■■ 4
UBR1Q8IWV7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC40.02■■■■■ 4
UBR1Q8IWV7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC40.02■■■■■ 4
UBR1Q8IWV7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC40.02■■■■■ 4
UBR1Q8IWV7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC40.01■■■■■ 4
UBR1Q8IWV7 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC40.01■■■■□ 3.99
UBR1Q8IWV7 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC39.99■■■■□ 3.99
UBR1Q8IWV7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC39.98■■■■□ 3.99
UBR1Q8IWV7 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC39.97■■■■□ 3.99
UBR1Q8IWV7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC39.96■■■■□ 3.99
UBR1Q8IWV7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC39.94■■■■□ 3.98
UBR1Q8IWV7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC39.94■■■■□ 3.98
UBR1Q8IWV7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC39.94■■■■□ 3.98
UBR1Q8IWV7 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
UBR1Q8IWV7 MIR4449-201ENST00000578365 66 ntBASIC39.94■■■■□ 3.98
UBR1Q8IWV7 WASH5P-204ENST00000632292 975 ntBASIC39.94■■■■□ 3.98
UBR1Q8IWV7 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC39.92■■■■□ 3.98
UBR1Q8IWV7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC39.9■■■■□ 3.98
UBR1Q8IWV7 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC39.89■■■■□ 3.98
UBR1Q8IWV7 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC39.87■■■■□ 3.97
UBR1Q8IWV7 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC39.87■■■■□ 3.97
UBR1Q8IWV7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC39.87■■■■□ 3.97
UBR1Q8IWV7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC39.86■■■■□ 3.97
UBR1Q8IWV7 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC39.85■■■■□ 3.97
UBR1Q8IWV7 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC39.85■■■■□ 3.97
UBR1Q8IWV7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC39.83■■■■□ 3.97
UBR1Q8IWV7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC39.82■■■■□ 3.96
UBR1Q8IWV7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC39.81■■■■□ 3.96
UBR1Q8IWV7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC39.81■■■■□ 3.96
UBR1Q8IWV7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC39.8■■■■□ 3.96
UBR1Q8IWV7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC39.79■■■■□ 3.96
UBR1Q8IWV7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC39.79■■■■□ 3.96
UBR1Q8IWV7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC39.78■■■■□ 3.96
UBR1Q8IWV7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC39.78■■■■□ 3.96
UBR1Q8IWV7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC39.76■■■■□ 3.96
UBR1Q8IWV7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC39.74■■■■□ 3.95
UBR1Q8IWV7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC39.74■■■■□ 3.95
UBR1Q8IWV7 DUX4L29-201ENST00000425409 679 ntBASIC39.74■■■■□ 3.95
UBR1Q8IWV7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC39.71■■■■□ 3.95
UBR1Q8IWV7 MIR639-201ENST00000384974 98 ntBASIC39.71■■■■□ 3.95
UBR1Q8IWV7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC39.7■■■■□ 3.95
UBR1Q8IWV7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC39.7■■■■□ 3.95
UBR1Q8IWV7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
UBR1Q8IWV7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
UBR1Q8IWV7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC39.63■■■■□ 3.93
UBR1Q8IWV7 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC39.63■■■■□ 3.93
UBR1Q8IWV7 AC021231.2-201ENST00000594613 730 ntBASIC39.62■■■■□ 3.93
UBR1Q8IWV7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC39.59■■■■□ 3.93
UBR1Q8IWV7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC39.59■■■■□ 3.93
UBR1Q8IWV7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC39.59■■■■□ 3.93
UBR1Q8IWV7 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC39.58■■■■□ 3.93
UBR1Q8IWV7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC39.57■■■■□ 3.93
UBR1Q8IWV7 HSD17B1P1-201ENST00000590052 955 ntBASIC39.57■■■■□ 3.93
UBR1Q8IWV7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC39.57■■■■□ 3.92
UBR1Q8IWV7 AC016575.1-201ENST00000607026 382 ntBASIC39.56■■■■□ 3.92
UBR1Q8IWV7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC39.56■■■■□ 3.92
UBR1Q8IWV7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC39.55■■■■□ 3.92
UBR1Q8IWV7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC39.55■■■■□ 3.92
UBR1Q8IWV7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC39.55■■■■□ 3.92
UBR1Q8IWV7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC39.54■■■■□ 3.92
UBR1Q8IWV7 MIR3648-2-201ENST00000581792 180 ntBASIC39.54■■■■□ 3.92
UBR1Q8IWV7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC39.54■■■■□ 3.92
UBR1Q8IWV7 MIR3648-1-201ENST00000615959 180 ntBASIC39.54■■■■□ 3.92
UBR1Q8IWV7 CR559946.2-201ENST00000623684 991 ntBASIC39.54■■■■□ 3.92
UBR1Q8IWV7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC39.53■■■■□ 3.92
UBR1Q8IWV7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC39.53■■■■□ 3.92
UBR1Q8IWV7 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC39.52■■■■□ 3.92
UBR1Q8IWV7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC39.5■■■■□ 3.91
UBR1Q8IWV7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC39.47■■■■□ 3.91
UBR1Q8IWV7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC39.47■■■■□ 3.91
UBR1Q8IWV7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC39.45■■■■□ 3.91
UBR1Q8IWV7 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC39.45■■■■□ 3.91
UBR1Q8IWV7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC39.45■■■■□ 3.91
UBR1Q8IWV7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC39.43■■■■□ 3.9
UBR1Q8IWV7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC39.42■■■■□ 3.9
UBR1Q8IWV7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC39.41■■■■□ 3.9
UBR1Q8IWV7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC39.41■■■■□ 3.9
UBR1Q8IWV7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC39.4■■■■□ 3.9
UBR1Q8IWV7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC39.4■■■■□ 3.9
UBR1Q8IWV7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC39.39■■■■□ 3.9
UBR1Q8IWV7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC39.38■■■■□ 3.89
UBR1Q8IWV7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC39.37■■■■□ 3.89
UBR1Q8IWV7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC39.37■■■■□ 3.89
UBR1Q8IWV7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC39.36■■■■□ 3.89
UBR1Q8IWV7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC39.36■■■■□ 3.89
UBR1Q8IWV7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC39.35■■■■□ 3.89
UBR1Q8IWV7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC39.34■■■■□ 3.89
UBR1Q8IWV7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC39.33■■■■□ 3.89
UBR1Q8IWV7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC39.33■■■■□ 3.89
UBR1Q8IWV7 MIR6090-201ENST00000622481 60 ntBASIC39.33■■■■□ 3.89
UBR1Q8IWV7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.89
UBR1Q8IWV7 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.88
UBR1Q8IWV7 AC108673.1-201ENST00000510422 1159 ntBASIC39.31■■■■□ 3.88
UBR1Q8IWV7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC39.3■■■■□ 3.88
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms