Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
LDB1Q86U70 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC27.15■■□□□ 1.94
LDB1Q86U70 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.15■■□□□ 1.94
LDB1Q86U70 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
LDB1Q86U70 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
LDB1Q86U70 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
LDB1Q86U70 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
LDB1Q86U70 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
LDB1Q86U70 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.11■■□□□ 1.93
LDB1Q86U70 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
LDB1Q86U70 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.09■■□□□ 1.93
LDB1Q86U70 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC27.09■■□□□ 1.93
LDB1Q86U70 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
LDB1Q86U70 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
LDB1Q86U70 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.02■■□□□ 1.92
LDB1Q86U70 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.02■■□□□ 1.92
LDB1Q86U70 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
LDB1Q86U70 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
LDB1Q86U70 AL133380.1-201ENST00000506013 324 ntBASIC26.99■■□□□ 1.91
LDB1Q86U70 RARRES2P7-201ENST00000567349 469 ntBASIC26.99■■□□□ 1.91
LDB1Q86U70 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
LDB1Q86U70 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
LDB1Q86U70 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.97■■□□□ 1.91
LDB1Q86U70 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.95■■□□□ 1.9
LDB1Q86U70 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
LDB1Q86U70 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
LDB1Q86U70 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.93■■□□□ 1.9
LDB1Q86U70 AL161658.1-201ENST00000623641 1967 ntBASIC26.92■■□□□ 1.9
LDB1Q86U70 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.91■■□□□ 1.9
LDB1Q86U70 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
LDB1Q86U70 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
LDB1Q86U70 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
LDB1Q86U70 SETD8P1-201ENST00000623146 1180 ntBASIC26.9■■□□□ 1.9
LDB1Q86U70 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.9■■□□□ 1.9
LDB1Q86U70 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
LDB1Q86U70 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
LDB1Q86U70 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
LDB1Q86U70 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.88■■□□□ 1.89
LDB1Q86U70 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.88■■□□□ 1.89
LDB1Q86U70 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
LDB1Q86U70 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
LDB1Q86U70 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.87■■□□□ 1.89
LDB1Q86U70 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
LDB1Q86U70 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
LDB1Q86U70 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
LDB1Q86U70 WASH5P-204ENST00000632292 975 ntBASIC26.84■■□□□ 1.89
LDB1Q86U70 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
LDB1Q86U70 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
LDB1Q86U70 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.89
LDB1Q86U70 ABCB10P1-201ENST00000614297 2181 ntBASIC26.83■■□□□ 1.89
LDB1Q86U70 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
LDB1Q86U70 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
LDB1Q86U70 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
LDB1Q86U70 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.8■■□□□ 1.88
LDB1Q86U70 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
LDB1Q86U70 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.79■■□□□ 1.88
LDB1Q86U70 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
LDB1Q86U70 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.78■■□□□ 1.88
LDB1Q86U70 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.78■■□□□ 1.88
LDB1Q86U70 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
LDB1Q86U70 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
LDB1Q86U70 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
LDB1Q86U70 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
LDB1Q86U70 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.74■■□□□ 1.87
LDB1Q86U70 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.73■■□□□ 1.87
LDB1Q86U70 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
LDB1Q86U70 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
LDB1Q86U70 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
LDB1Q86U70 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
LDB1Q86U70 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.71■■□□□ 1.87
LDB1Q86U70 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
LDB1Q86U70 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
LDB1Q86U70 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
LDB1Q86U70 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
LDB1Q86U70 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
LDB1Q86U70 AC136428.2-201ENST00000563187 214 ntBASIC26.69■■□□□ 1.86
LDB1Q86U70 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
LDB1Q86U70 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
LDB1Q86U70 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
LDB1Q86U70 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
LDB1Q86U70 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.67■■□□□ 1.86
LDB1Q86U70 AC097358.2-201ENST00000607541 1159 ntBASIC26.67■■□□□ 1.86
LDB1Q86U70 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
LDB1Q86U70 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
LDB1Q86U70 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
LDB1Q86U70 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.65■■□□□ 1.86
LDB1Q86U70 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
LDB1Q86U70 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
LDB1Q86U70 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
LDB1Q86U70 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.85
LDB1Q86U70 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.64■■□□□ 1.85
LDB1Q86U70 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
LDB1Q86U70 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
LDB1Q86U70 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.63■■□□□ 1.85
LDB1Q86U70 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
LDB1Q86U70 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
LDB1Q86U70 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
LDB1Q86U70 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
LDB1Q86U70 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.62■■□□□ 1.85
LDB1Q86U70 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.61■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms