Protein–RNA interactions for Protein: Q6X4T0

C12orf54, Uncharacterized protein C12orf54, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf54Q6X4T0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
C12orf54Q6X4T0 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
C12orf54Q6X4T0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
C12orf54Q6X4T0 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
C12orf54Q6X4T0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.85■■□□□ 1.09
C12orf54Q6X4T0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
C12orf54Q6X4T0 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC21.83■■□□□ 1.08
C12orf54Q6X4T0 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.08
C12orf54Q6X4T0 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
C12orf54Q6X4T0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
C12orf54Q6X4T0 MIR4449-201ENST00000578365 66 ntBASIC21.82■■□□□ 1.08
C12orf54Q6X4T0 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
C12orf54Q6X4T0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
C12orf54Q6X4T0 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.81■■□□□ 1.08
C12orf54Q6X4T0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.81■■□□□ 1.08
C12orf54Q6X4T0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
C12orf54Q6X4T0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
C12orf54Q6X4T0 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
C12orf54Q6X4T0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
C12orf54Q6X4T0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
C12orf54Q6X4T0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
C12orf54Q6X4T0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.77■■□□□ 1.08
C12orf54Q6X4T0 DUX4L29-201ENST00000425409 679 ntBASIC21.77■■□□□ 1.08
C12orf54Q6X4T0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
C12orf54Q6X4T0 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
C12orf54Q6X4T0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
C12orf54Q6X4T0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC21.76■■□□□ 1.07
C12orf54Q6X4T0 ST7-205ENST00000393446 2114 ntTSL 5 BASIC21.76■■□□□ 1.07
C12orf54Q6X4T0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC21.76■■□□□ 1.07
C12orf54Q6X4T0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
C12orf54Q6X4T0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
C12orf54Q6X4T0 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
C12orf54Q6X4T0 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
C12orf54Q6X4T0 MIR639-201ENST00000384974 98 ntBASIC21.74■■□□□ 1.07
C12orf54Q6X4T0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.73■■□□□ 1.07
C12orf54Q6X4T0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
C12orf54Q6X4T0 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
C12orf54Q6X4T0 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.72■■□□□ 1.07
C12orf54Q6X4T0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.72■■□□□ 1.07
C12orf54Q6X4T0 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
C12orf54Q6X4T0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
C12orf54Q6X4T0 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
C12orf54Q6X4T0 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
C12orf54Q6X4T0 HSD17B1P1-201ENST00000590052 955 ntBASIC21.67■■□□□ 1.06
C12orf54Q6X4T0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
C12orf54Q6X4T0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.66■■□□□ 1.06
C12orf54Q6X4T0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.65■■□□□ 1.06
C12orf54Q6X4T0 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
C12orf54Q6X4T0 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
C12orf54Q6X4T0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
C12orf54Q6X4T0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
C12orf54Q6X4T0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.63■■□□□ 1.05
C12orf54Q6X4T0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.63■■□□□ 1.05
C12orf54Q6X4T0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.62■■□□□ 1.05
C12orf54Q6X4T0 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
C12orf54Q6X4T0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
C12orf54Q6X4T0 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
C12orf54Q6X4T0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.59■■□□□ 1.05
C12orf54Q6X4T0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
C12orf54Q6X4T0 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
C12orf54Q6X4T0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
C12orf54Q6X4T0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.58■■□□□ 1.05
C12orf54Q6X4T0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
C12orf54Q6X4T0 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
C12orf54Q6X4T0 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
C12orf54Q6X4T0 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.56■■□□□ 1.04
C12orf54Q6X4T0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.56■■□□□ 1.04
C12orf54Q6X4T0 AC016575.1-201ENST00000607026 382 ntBASIC21.56■■□□□ 1.04
C12orf54Q6X4T0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.55■■□□□ 1.04
C12orf54Q6X4T0 AC021231.2-201ENST00000594613 730 ntBASIC21.55■■□□□ 1.04
C12orf54Q6X4T0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.55■■□□□ 1.04
C12orf54Q6X4T0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
C12orf54Q6X4T0 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
C12orf54Q6X4T0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
C12orf54Q6X4T0 MIR3648-2-201ENST00000581792 180 ntBASIC21.53■■□□□ 1.04
C12orf54Q6X4T0 MIR3648-1-201ENST00000615959 180 ntBASIC21.53■■□□□ 1.04
C12orf54Q6X4T0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.53■■□□□ 1.04
C12orf54Q6X4T0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
C12orf54Q6X4T0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.52■■□□□ 1.04
C12orf54Q6X4T0 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
C12orf54Q6X4T0 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
C12orf54Q6X4T0 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
C12orf54Q6X4T0 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
C12orf54Q6X4T0 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC21.5■■□□□ 1.03
C12orf54Q6X4T0 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.5■■□□□ 1.03
C12orf54Q6X4T0 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
C12orf54Q6X4T0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.5■■□□□ 1.03
C12orf54Q6X4T0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.5■■□□□ 1.03
C12orf54Q6X4T0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.5■■□□□ 1.03
C12orf54Q6X4T0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
C12orf54Q6X4T0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.49■■□□□ 1.03
C12orf54Q6X4T0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.49■■□□□ 1.03
C12orf54Q6X4T0 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.49■■□□□ 1.03
C12orf54Q6X4T0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
C12orf54Q6X4T0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
C12orf54Q6X4T0 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
C12orf54Q6X4T0 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
C12orf54Q6X4T0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
C12orf54Q6X4T0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.47■■□□□ 1.03
C12orf54Q6X4T0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms