Protein–RNA interactions for Protein: Q6V1P9

DCHS2, Protocadherin-23, humanhuman

Predictions only

Length 2,916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCHS2Q6V1P9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.92■■□□□ 1.42
DCHS2Q6V1P9 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.92■■□□□ 1.42
DCHS2Q6V1P9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
DCHS2Q6V1P9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
DCHS2Q6V1P9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
DCHS2Q6V1P9 MIR639-201ENST00000384974 98 ntBASIC23.87■■□□□ 1.41
DCHS2Q6V1P9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
DCHS2Q6V1P9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.86■■□□□ 1.41
DCHS2Q6V1P9 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC23.85■■□□□ 1.41
DCHS2Q6V1P9 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
DCHS2Q6V1P9 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
DCHS2Q6V1P9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
DCHS2Q6V1P9 HSD17B1P1-201ENST00000590052 955 ntBASIC23.84■■□□□ 1.41
DCHS2Q6V1P9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
DCHS2Q6V1P9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
DCHS2Q6V1P9 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
DCHS2Q6V1P9 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DCHS2Q6V1P9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DCHS2Q6V1P9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.81■■□□□ 1.4
DCHS2Q6V1P9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DCHS2Q6V1P9 MIR3648-2-201ENST00000581792 180 ntBASIC23.81■■□□□ 1.4
DCHS2Q6V1P9 MIR3648-1-201ENST00000615959 180 ntBASIC23.81■■□□□ 1.4
DCHS2Q6V1P9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.8■■□□□ 1.4
DCHS2Q6V1P9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
DCHS2Q6V1P9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.79■■□□□ 1.4
DCHS2Q6V1P9 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DCHS2Q6V1P9 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
DCHS2Q6V1P9 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
DCHS2Q6V1P9 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
DCHS2Q6V1P9 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DCHS2Q6V1P9 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC23.75■■□□□ 1.39
DCHS2Q6V1P9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.75■■□□□ 1.39
DCHS2Q6V1P9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.75■■□□□ 1.39
DCHS2Q6V1P9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DCHS2Q6V1P9 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DCHS2Q6V1P9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
DCHS2Q6V1P9 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC23.72■■□□□ 1.39
DCHS2Q6V1P9 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
DCHS2Q6V1P9 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
DCHS2Q6V1P9 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
DCHS2Q6V1P9 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
DCHS2Q6V1P9 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.7■■□□□ 1.39
DCHS2Q6V1P9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.7■■□□□ 1.39
DCHS2Q6V1P9 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
DCHS2Q6V1P9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
DCHS2Q6V1P9 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
DCHS2Q6V1P9 AC016575.1-201ENST00000607026 382 ntBASIC23.69■■□□□ 1.38
DCHS2Q6V1P9 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
DCHS2Q6V1P9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
DCHS2Q6V1P9 DUX4L29-201ENST00000425409 679 ntBASIC23.67■■□□□ 1.38
DCHS2Q6V1P9 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
DCHS2Q6V1P9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DCHS2Q6V1P9 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.66■■□□□ 1.38
DCHS2Q6V1P9 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.66■■□□□ 1.38
DCHS2Q6V1P9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.66■■□□□ 1.38
DCHS2Q6V1P9 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.66■■□□□ 1.38
DCHS2Q6V1P9 CR559946.2-201ENST00000623684 991 ntBASIC23.65■■□□□ 1.38
DCHS2Q6V1P9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
DCHS2Q6V1P9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
DCHS2Q6V1P9 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC23.63■■□□□ 1.37
DCHS2Q6V1P9 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
DCHS2Q6V1P9 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DCHS2Q6V1P9 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
DCHS2Q6V1P9 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC23.62■■□□□ 1.37
DCHS2Q6V1P9 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
DCHS2Q6V1P9 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
DCHS2Q6V1P9 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC23.59■■□□□ 1.37
DCHS2Q6V1P9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
DCHS2Q6V1P9 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DCHS2Q6V1P9 AC021231.2-201ENST00000594613 730 ntBASIC23.58■■□□□ 1.37
DCHS2Q6V1P9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
DCHS2Q6V1P9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
DCHS2Q6V1P9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DCHS2Q6V1P9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.57■■□□□ 1.36
DCHS2Q6V1P9 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.56■■□□□ 1.36
DCHS2Q6V1P9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.56■■□□□ 1.36
DCHS2Q6V1P9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DCHS2Q6V1P9 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
DCHS2Q6V1P9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.55■■□□□ 1.36
DCHS2Q6V1P9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.54■■□□□ 1.36
DCHS2Q6V1P9 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DCHS2Q6V1P9 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
DCHS2Q6V1P9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.53■■□□□ 1.36
DCHS2Q6V1P9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.53■■□□□ 1.36
DCHS2Q6V1P9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.53■■□□□ 1.36
DCHS2Q6V1P9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
DCHS2Q6V1P9 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
DCHS2Q6V1P9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
DCHS2Q6V1P9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.51■■□□□ 1.35
DCHS2Q6V1P9 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
DCHS2Q6V1P9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.5■■□□□ 1.35
DCHS2Q6V1P9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
DCHS2Q6V1P9 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
DCHS2Q6V1P9 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
DCHS2Q6V1P9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
DCHS2Q6V1P9 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
DCHS2Q6V1P9 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
DCHS2Q6V1P9 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
DCHS2Q6V1P9 WASH5P-204ENST00000632292 975 ntBASIC23.46■■□□□ 1.35
DCHS2Q6V1P9 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms