Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
PPP4R3AQ6IN85 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
PPP4R3AQ6IN85 WASH5P-204ENST00000632292 975 ntBASIC30.89■■■□□ 2.54
PPP4R3AQ6IN85 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
PPP4R3AQ6IN85 CAHM-201ENST00000604200 896 ntBASIC30.87■■■□□ 2.53
PPP4R3AQ6IN85 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.86■■■□□ 2.53
PPP4R3AQ6IN85 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.86■■■□□ 2.53
PPP4R3AQ6IN85 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
PPP4R3AQ6IN85 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PPP4R3AQ6IN85 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PPP4R3AQ6IN85 AL391121.1-201ENST00000607967 1349 ntBASIC30.83■■■□□ 2.53
PPP4R3AQ6IN85 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
PPP4R3AQ6IN85 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
PPP4R3AQ6IN85 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.81■■■□□ 2.52
PPP4R3AQ6IN85 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.81■■■□□ 2.52
PPP4R3AQ6IN85 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PPP4R3AQ6IN85 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PPP4R3AQ6IN85 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
PPP4R3AQ6IN85 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
PPP4R3AQ6IN85 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
PPP4R3AQ6IN85 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PPP4R3AQ6IN85 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PPP4R3AQ6IN85 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
PPP4R3AQ6IN85 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.76■■■□□ 2.51
PPP4R3AQ6IN85 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
PPP4R3AQ6IN85 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
PPP4R3AQ6IN85 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
PPP4R3AQ6IN85 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.73■■■□□ 2.51
PPP4R3AQ6IN85 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PPP4R3AQ6IN85 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PPP4R3AQ6IN85 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
PPP4R3AQ6IN85 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.72■■■□□ 2.51
PPP4R3AQ6IN85 SUZ12P1-203ENST00000578195 985 ntBASIC30.72■■■□□ 2.51
PPP4R3AQ6IN85 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
PPP4R3AQ6IN85 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.69■■■□□ 2.5
PPP4R3AQ6IN85 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
PPP4R3AQ6IN85 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PPP4R3AQ6IN85 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PPP4R3AQ6IN85 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
PPP4R3AQ6IN85 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.67■■■□□ 2.5
PPP4R3AQ6IN85 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
PPP4R3AQ6IN85 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PPP4R3AQ6IN85 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
PPP4R3AQ6IN85 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.64■■■□□ 2.5
PPP4R3AQ6IN85 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
PPP4R3AQ6IN85 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
PPP4R3AQ6IN85 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PPP4R3AQ6IN85 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
PPP4R3AQ6IN85 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.6■■■□□ 2.49
PPP4R3AQ6IN85 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.58■■■□□ 2.49
PPP4R3AQ6IN85 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.55■■■□□ 2.48
PPP4R3AQ6IN85 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
PPP4R3AQ6IN85 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.54■■■□□ 2.48
PPP4R3AQ6IN85 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PPP4R3AQ6IN85 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.54■■■□□ 2.48
PPP4R3AQ6IN85 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
PPP4R3AQ6IN85 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
PPP4R3AQ6IN85 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
PPP4R3AQ6IN85 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
PPP4R3AQ6IN85 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.49■■■□□ 2.47
PPP4R3AQ6IN85 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.49■■■□□ 2.47
PPP4R3AQ6IN85 AL161658.1-201ENST00000623641 1967 ntBASIC30.48■■■□□ 2.47
PPP4R3AQ6IN85 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PPP4R3AQ6IN85 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
PPP4R3AQ6IN85 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
PPP4R3AQ6IN85 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
PPP4R3AQ6IN85 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
PPP4R3AQ6IN85 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.45■■■□□ 2.47
PPP4R3AQ6IN85 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PPP4R3AQ6IN85 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
PPP4R3AQ6IN85 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.43■■■□□ 2.46
PPP4R3AQ6IN85 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.43■■■□□ 2.46
PPP4R3AQ6IN85 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PPP4R3AQ6IN85 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
PPP4R3AQ6IN85 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.43■■■□□ 2.46
PPP4R3AQ6IN85 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
PPP4R3AQ6IN85 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.42■■■□□ 2.46
PPP4R3AQ6IN85 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
PPP4R3AQ6IN85 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
PPP4R3AQ6IN85 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
PPP4R3AQ6IN85 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.41■■■□□ 2.46
PPP4R3AQ6IN85 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
PPP4R3AQ6IN85 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
PPP4R3AQ6IN85 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
PPP4R3AQ6IN85 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
PPP4R3AQ6IN85 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
PPP4R3AQ6IN85 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
PPP4R3AQ6IN85 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.39■■■□□ 2.46
PPP4R3AQ6IN85 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.38■■■□□ 2.45
PPP4R3AQ6IN85 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
PPP4R3AQ6IN85 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
PPP4R3AQ6IN85 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
PPP4R3AQ6IN85 MIR762-201ENST00000390236 83 ntBASIC30.37■■■□□ 2.45
PPP4R3AQ6IN85 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
PPP4R3AQ6IN85 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.37■■■□□ 2.45
PPP4R3AQ6IN85 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
PPP4R3AQ6IN85 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
PPP4R3AQ6IN85 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
PPP4R3AQ6IN85 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.36■■■□□ 2.45
PPP4R3AQ6IN85 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms