Protein–RNA interactions for Protein: Q6DRA6

HIST2H2BD, Putative histone H2B type 2-D, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BDQ6DRA6 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC21.32■■□□□ 1
HIST2H2BDQ6DRA6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
HIST2H2BDQ6DRA6 HLA-V-202ENST00000446817 847 ntBASIC21.32■■□□□ 1
HIST2H2BDQ6DRA6 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.32■■□□□ 1
HIST2H2BDQ6DRA6 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC21.31■■□□□ 1
HIST2H2BDQ6DRA6 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HIST2H2BDQ6DRA6 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC21.3■■□□□ 1
HIST2H2BDQ6DRA6 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.3■■□□□ 1
HIST2H2BDQ6DRA6 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HIST2H2BDQ6DRA6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.29■■□□□ 1
HIST2H2BDQ6DRA6 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HIST2H2BDQ6DRA6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HIST2H2BDQ6DRA6 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
HIST2H2BDQ6DRA6 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
HIST2H2BDQ6DRA6 WASH5P-204ENST00000632292 975 ntBASIC21.27■■□□□ 1
HIST2H2BDQ6DRA6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.26■□□□□ 0.99
HIST2H2BDQ6DRA6 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIST2H2BDQ6DRA6 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIST2H2BDQ6DRA6 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST2H2BDQ6DRA6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
HIST2H2BDQ6DRA6 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST2H2BDQ6DRA6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
HIST2H2BDQ6DRA6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
HIST2H2BDQ6DRA6 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
HIST2H2BDQ6DRA6 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIST2H2BDQ6DRA6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HIST2H2BDQ6DRA6 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.21■□□□□ 0.99
HIST2H2BDQ6DRA6 AC044849.2-201ENST00000606596 710 ntBASIC21.21■□□□□ 0.99
HIST2H2BDQ6DRA6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
HIST2H2BDQ6DRA6 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HIST2H2BDQ6DRA6 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIST2H2BDQ6DRA6 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIST2H2BDQ6DRA6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.17■□□□□ 0.98
HIST2H2BDQ6DRA6 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HIST2H2BDQ6DRA6 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIST2H2BDQ6DRA6 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HIST2H2BDQ6DRA6 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST2H2BDQ6DRA6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.16■□□□□ 0.98
HIST2H2BDQ6DRA6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.16■□□□□ 0.98
HIST2H2BDQ6DRA6 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST2H2BDQ6DRA6 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
HIST2H2BDQ6DRA6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HIST2H2BDQ6DRA6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HIST2H2BDQ6DRA6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HIST2H2BDQ6DRA6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.14■□□□□ 0.97
HIST2H2BDQ6DRA6 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HIST2H2BDQ6DRA6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.13■□□□□ 0.97
HIST2H2BDQ6DRA6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.12■□□□□ 0.97
HIST2H2BDQ6DRA6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HIST2H2BDQ6DRA6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.12■□□□□ 0.97
HIST2H2BDQ6DRA6 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
HIST2H2BDQ6DRA6 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.12■□□□□ 0.97
HIST2H2BDQ6DRA6 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIST2H2BDQ6DRA6 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIST2H2BDQ6DRA6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.11■□□□□ 0.97
HIST2H2BDQ6DRA6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.11■□□□□ 0.97
HIST2H2BDQ6DRA6 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HIST2H2BDQ6DRA6 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HIST2H2BDQ6DRA6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.1■□□□□ 0.97
HIST2H2BDQ6DRA6 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HIST2H2BDQ6DRA6 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIST2H2BDQ6DRA6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HIST2H2BDQ6DRA6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HIST2H2BDQ6DRA6 ZNRF2P2-203ENST00000454624 420 ntBASIC21.09■□□□□ 0.97
HIST2H2BDQ6DRA6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.09■□□□□ 0.97
HIST2H2BDQ6DRA6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.09■□□□□ 0.97
HIST2H2BDQ6DRA6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HIST2H2BDQ6DRA6 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
HIST2H2BDQ6DRA6 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HIST2H2BDQ6DRA6 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HIST2H2BDQ6DRA6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HIST2H2BDQ6DRA6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.08■□□□□ 0.97
HIST2H2BDQ6DRA6 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIST2H2BDQ6DRA6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.07■□□□□ 0.96
HIST2H2BDQ6DRA6 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HIST2H2BDQ6DRA6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIST2H2BDQ6DRA6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.06■□□□□ 0.96
HIST2H2BDQ6DRA6 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIST2H2BDQ6DRA6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
HIST2H2BDQ6DRA6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HIST2H2BDQ6DRA6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HIST2H2BDQ6DRA6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.05■□□□□ 0.96
HIST2H2BDQ6DRA6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIST2H2BDQ6DRA6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HIST2H2BDQ6DRA6 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIST2H2BDQ6DRA6 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HIST2H2BDQ6DRA6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.03■□□□□ 0.96
HIST2H2BDQ6DRA6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HIST2H2BDQ6DRA6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.01■□□□□ 0.95
HIST2H2BDQ6DRA6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21■□□□□ 0.95
HIST2H2BDQ6DRA6 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HIST2H2BDQ6DRA6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.99■□□□□ 0.95
HIST2H2BDQ6DRA6 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC20.98■□□□□ 0.95
HIST2H2BDQ6DRA6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.96■□□□□ 0.95
HIST2H2BDQ6DRA6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.96■□□□□ 0.95
HIST2H2BDQ6DRA6 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HIST2H2BDQ6DRA6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HIST2H2BDQ6DRA6 AC021231.2-201ENST00000594613 730 ntBASIC20.95■□□□□ 0.94
HIST2H2BDQ6DRA6 MIR6090-201ENST00000622481 60 ntBASIC20.95■□□□□ 0.94
HIST2H2BDQ6DRA6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms