Protein–RNA interactions for Protein: Q4G0N8

SLC9C1, Sodium/hydrogen exchanger 10, humanhuman

Predictions only

Length 1,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9C1Q4G0N8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.76■■■□□ 2.67
SLC9C1Q4G0N8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.75■■■□□ 2.67
SLC9C1Q4G0N8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SLC9C1Q4G0N8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.74■■■□□ 2.67
SLC9C1Q4G0N8 MIR4449-201ENST00000578365 66 ntBASIC31.73■■■□□ 2.67
SLC9C1Q4G0N8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
SLC9C1Q4G0N8 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.67
SLC9C1Q4G0N8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
SLC9C1Q4G0N8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
SLC9C1Q4G0N8 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SLC9C1Q4G0N8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.68■■■□□ 2.66
SLC9C1Q4G0N8 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SLC9C1Q4G0N8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.67■■■□□ 2.66
SLC9C1Q4G0N8 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.64■■■□□ 2.66
SLC9C1Q4G0N8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
SLC9C1Q4G0N8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.63■■■□□ 2.65
SLC9C1Q4G0N8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
SLC9C1Q4G0N8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
SLC9C1Q4G0N8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.61■■■□□ 2.65
SLC9C1Q4G0N8 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
SLC9C1Q4G0N8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.6■■■□□ 2.65
SLC9C1Q4G0N8 MIR639-201ENST00000384974 98 ntBASIC31.58■■■□□ 2.65
SLC9C1Q4G0N8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SLC9C1Q4G0N8 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.57■■■□□ 2.65
SLC9C1Q4G0N8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SLC9C1Q4G0N8 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SLC9C1Q4G0N8 DUX4L29-201ENST00000425409 679 ntBASIC31.55■■■□□ 2.64
SLC9C1Q4G0N8 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SLC9C1Q4G0N8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.51■■■□□ 2.63
SLC9C1Q4G0N8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SLC9C1Q4G0N8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.48■■■□□ 2.63
SLC9C1Q4G0N8 HSD17B1P1-201ENST00000590052 955 ntBASIC31.47■■■□□ 2.63
SLC9C1Q4G0N8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.46■■■□□ 2.63
SLC9C1Q4G0N8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.46■■■□□ 2.63
SLC9C1Q4G0N8 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.45■■■□□ 2.63
SLC9C1Q4G0N8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.45■■■□□ 2.63
SLC9C1Q4G0N8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
SLC9C1Q4G0N8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SLC9C1Q4G0N8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SLC9C1Q4G0N8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
SLC9C1Q4G0N8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SLC9C1Q4G0N8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.43■■■□□ 2.62
SLC9C1Q4G0N8 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.41■■■□□ 2.62
SLC9C1Q4G0N8 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
SLC9C1Q4G0N8 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
SLC9C1Q4G0N8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC31.39■■■□□ 2.62
SLC9C1Q4G0N8 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
SLC9C1Q4G0N8 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SLC9C1Q4G0N8 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SLC9C1Q4G0N8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
SLC9C1Q4G0N8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.35■■■□□ 2.61
SLC9C1Q4G0N8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
SLC9C1Q4G0N8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.34■■■□□ 2.61
SLC9C1Q4G0N8 AC021231.2-201ENST00000594613 730 ntBASIC31.33■■■□□ 2.61
SLC9C1Q4G0N8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.33■■■□□ 2.61
SLC9C1Q4G0N8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SLC9C1Q4G0N8 AC016575.1-201ENST00000607026 382 ntBASIC31.32■■■□□ 2.6
SLC9C1Q4G0N8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.31■■■□□ 2.6
SLC9C1Q4G0N8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.31■■■□□ 2.6
SLC9C1Q4G0N8 MIR3648-2-201ENST00000581792 180 ntBASIC31.3■■■□□ 2.6
SLC9C1Q4G0N8 MIR3648-1-201ENST00000615959 180 ntBASIC31.3■■■□□ 2.6
SLC9C1Q4G0N8 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.29■■■□□ 2.6
SLC9C1Q4G0N8 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SLC9C1Q4G0N8 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SLC9C1Q4G0N8 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SLC9C1Q4G0N8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
SLC9C1Q4G0N8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.28■■■□□ 2.6
SLC9C1Q4G0N8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SLC9C1Q4G0N8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.27■■■□□ 2.6
SLC9C1Q4G0N8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.26■■■□□ 2.59
SLC9C1Q4G0N8 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.26■■■□□ 2.59
SLC9C1Q4G0N8 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.25■■■□□ 2.59
SLC9C1Q4G0N8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SLC9C1Q4G0N8 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
SLC9C1Q4G0N8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
SLC9C1Q4G0N8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
SLC9C1Q4G0N8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SLC9C1Q4G0N8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.21■■■□□ 2.59
SLC9C1Q4G0N8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
SLC9C1Q4G0N8 WASH5P-204ENST00000632292 975 ntBASIC31.21■■■□□ 2.59
SLC9C1Q4G0N8 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.2■■■□□ 2.59
SLC9C1Q4G0N8 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
SLC9C1Q4G0N8 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.19■■■□□ 2.58
SLC9C1Q4G0N8 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SLC9C1Q4G0N8 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
SLC9C1Q4G0N8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SLC9C1Q4G0N8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.18■■■□□ 2.58
SLC9C1Q4G0N8 ABHD17AP3-201ENST00000503096 1137 ntBASIC31.17■■■□□ 2.58
SLC9C1Q4G0N8 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SLC9C1Q4G0N8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.14■■■□□ 2.58
SLC9C1Q4G0N8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.13■■■□□ 2.57
SLC9C1Q4G0N8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.13■■■□□ 2.57
SLC9C1Q4G0N8 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SLC9C1Q4G0N8 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SLC9C1Q4G0N8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SLC9C1Q4G0N8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.11■■■□□ 2.57
SLC9C1Q4G0N8 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
SLC9C1Q4G0N8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
SLC9C1Q4G0N8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SLC9C1Q4G0N8 CR559946.2-201ENST00000623684 991 ntBASIC31.09■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 185.2 ms