Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
VMA21Q3ZAQ7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.85■■□□□ 1.09
VMA21Q3ZAQ7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.85■■□□□ 1.09
VMA21Q3ZAQ7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VMA21Q3ZAQ7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VMA21Q3ZAQ7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VMA21Q3ZAQ7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VMA21Q3ZAQ7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
VMA21Q3ZAQ7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.84■■□□□ 1.09
VMA21Q3ZAQ7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC21.83■■□□□ 1.09
VMA21Q3ZAQ7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.83■■□□□ 1.08
VMA21Q3ZAQ7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.81■■□□□ 1.08
VMA21Q3ZAQ7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.81■■□□□ 1.08
VMA21Q3ZAQ7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VMA21Q3ZAQ7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VMA21Q3ZAQ7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.8■■□□□ 1.08
VMA21Q3ZAQ7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VMA21Q3ZAQ7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
VMA21Q3ZAQ7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
VMA21Q3ZAQ7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VMA21Q3ZAQ7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
VMA21Q3ZAQ7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
VMA21Q3ZAQ7 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VMA21Q3ZAQ7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
VMA21Q3ZAQ7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.73■■□□□ 1.07
VMA21Q3ZAQ7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.73■■□□□ 1.07
VMA21Q3ZAQ7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VMA21Q3ZAQ7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VMA21Q3ZAQ7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
VMA21Q3ZAQ7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.7■■□□□ 1.06
VMA21Q3ZAQ7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VMA21Q3ZAQ7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
VMA21Q3ZAQ7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VMA21Q3ZAQ7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
VMA21Q3ZAQ7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VMA21Q3ZAQ7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VMA21Q3ZAQ7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
VMA21Q3ZAQ7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VMA21Q3ZAQ7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.67■■□□□ 1.06
VMA21Q3ZAQ7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
VMA21Q3ZAQ7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.65■■□□□ 1.06
VMA21Q3ZAQ7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
VMA21Q3ZAQ7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
VMA21Q3ZAQ7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VMA21Q3ZAQ7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.62■■□□□ 1.05
VMA21Q3ZAQ7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
VMA21Q3ZAQ7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.61■■□□□ 1.05
VMA21Q3ZAQ7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VMA21Q3ZAQ7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.6■■□□□ 1.05
VMA21Q3ZAQ7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VMA21Q3ZAQ7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VMA21Q3ZAQ7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
VMA21Q3ZAQ7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
VMA21Q3ZAQ7 AL161658.1-201ENST00000623641 1967 ntBASIC21.57■■□□□ 1.04
VMA21Q3ZAQ7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VMA21Q3ZAQ7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VMA21Q3ZAQ7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
VMA21Q3ZAQ7 AL133380.1-201ENST00000506013 324 ntBASIC21.55■■□□□ 1.04
VMA21Q3ZAQ7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VMA21Q3ZAQ7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VMA21Q3ZAQ7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
VMA21Q3ZAQ7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VMA21Q3ZAQ7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VMA21Q3ZAQ7 RARRES2P7-201ENST00000567349 469 ntBASIC21.53■■□□□ 1.04
VMA21Q3ZAQ7 WASH5P-204ENST00000632292 975 ntBASIC21.53■■□□□ 1.04
VMA21Q3ZAQ7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VMA21Q3ZAQ7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
VMA21Q3ZAQ7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
VMA21Q3ZAQ7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.52■■□□□ 1.04
VMA21Q3ZAQ7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
VMA21Q3ZAQ7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.52■■□□□ 1.04
VMA21Q3ZAQ7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.52■■□□□ 1.03
VMA21Q3ZAQ7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
VMA21Q3ZAQ7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
VMA21Q3ZAQ7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VMA21Q3ZAQ7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.5■■□□□ 1.03
VMA21Q3ZAQ7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
VMA21Q3ZAQ7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VMA21Q3ZAQ7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
VMA21Q3ZAQ7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.49■■□□□ 1.03
VMA21Q3ZAQ7 ABCB10P1-201ENST00000614297 2181 ntBASIC21.48■■□□□ 1.03
VMA21Q3ZAQ7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
VMA21Q3ZAQ7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
VMA21Q3ZAQ7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VMA21Q3ZAQ7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
VMA21Q3ZAQ7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VMA21Q3ZAQ7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
VMA21Q3ZAQ7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
VMA21Q3ZAQ7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
VMA21Q3ZAQ7 SETD8P1-201ENST00000623146 1180 ntBASIC21.44■■□□□ 1.02
VMA21Q3ZAQ7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.44■■□□□ 1.02
VMA21Q3ZAQ7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
VMA21Q3ZAQ7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VMA21Q3ZAQ7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VMA21Q3ZAQ7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VMA21Q3ZAQ7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
VMA21Q3ZAQ7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
VMA21Q3ZAQ7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
VMA21Q3ZAQ7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VMA21Q3ZAQ7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms