Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
GABREP78334 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.27■■□□□ 1.8
GABREP78334 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
GABREP78334 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
GABREP78334 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
GABREP78334 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.22■■□□□ 1.79
GABREP78334 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
GABREP78334 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
GABREP78334 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.18■■□□□ 1.78
GABREP78334 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.18■■□□□ 1.78
GABREP78334 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
GABREP78334 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.18■■□□□ 1.78
GABREP78334 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
GABREP78334 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
GABREP78334 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
GABREP78334 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.14■■□□□ 1.78
GABREP78334 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
GABREP78334 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.13■■□□□ 1.77
GABREP78334 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
GABREP78334 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.13■■□□□ 1.77
GABREP78334 WASH5P-204ENST00000632292 975 ntBASIC26.13■■□□□ 1.77
GABREP78334 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
GABREP78334 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
GABREP78334 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
GABREP78334 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
GABREP78334 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
GABREP78334 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
GABREP78334 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
GABREP78334 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
GABREP78334 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.08■■□□□ 1.77
GABREP78334 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
GABREP78334 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.07■■□□□ 1.76
GABREP78334 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
GABREP78334 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
GABREP78334 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.05■■□□□ 1.76
GABREP78334 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
GABREP78334 DUX4L29-201ENST00000425409 679 ntBASIC26.04■■□□□ 1.76
GABREP78334 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
GABREP78334 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
GABREP78334 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
GABREP78334 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.01■■□□□ 1.75
GABREP78334 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
GABREP78334 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
GABREP78334 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26■■□□□ 1.75
GABREP78334 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26■■□□□ 1.75
GABREP78334 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26■■□□□ 1.75
GABREP78334 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
GABREP78334 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
GABREP78334 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
GABREP78334 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.97■■□□□ 1.75
GABREP78334 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
GABREP78334 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.95■■□□□ 1.74
GABREP78334 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
GABREP78334 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
GABREP78334 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
GABREP78334 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
GABREP78334 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
GABREP78334 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
GABREP78334 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
GABREP78334 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
GABREP78334 MIR4449-201ENST00000578365 66 ntBASIC25.9■■□□□ 1.74
GABREP78334 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.89■■□□□ 1.74
GABREP78334 AC021231.2-201ENST00000594613 730 ntBASIC25.89■■□□□ 1.74
GABREP78334 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.87■■□□□ 1.73
GABREP78334 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.87■■□□□ 1.73
GABREP78334 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
GABREP78334 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
GABREP78334 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
GABREP78334 MIR639-201ENST00000384974 98 ntBASIC25.85■■□□□ 1.73
GABREP78334 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
GABREP78334 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
GABREP78334 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.84■■□□□ 1.73
GABREP78334 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
GABREP78334 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
GABREP78334 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
GABREP78334 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.79■■□□□ 1.72
GABREP78334 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.79■■□□□ 1.72
GABREP78334 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
GABREP78334 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.78■■□□□ 1.72
GABREP78334 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.78■■□□□ 1.72
GABREP78334 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.77■■□□□ 1.72
GABREP78334 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
GABREP78334 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.76■■□□□ 1.71
GABREP78334 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
GABREP78334 AC108673.1-201ENST00000510422 1159 ntBASIC25.75■■□□□ 1.71
GABREP78334 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.75■■□□□ 1.71
GABREP78334 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
GABREP78334 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
GABREP78334 MIR3648-2-201ENST00000581792 180 ntBASIC25.73■■□□□ 1.71
GABREP78334 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.73■■□□□ 1.71
GABREP78334 AC016575.1-201ENST00000607026 382 ntBASIC25.73■■□□□ 1.71
GABREP78334 MIR3648-1-201ENST00000615959 180 ntBASIC25.73■■□□□ 1.71
GABREP78334 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.72■■□□□ 1.71
GABREP78334 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
GABREP78334 MIR6090-201ENST00000622481 60 ntBASIC25.71■■□□□ 1.71
GABREP78334 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
GABREP78334 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
GABREP78334 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
GABREP78334 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
GABREP78334 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms