Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
APOC4P55056 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
APOC4P55056 RPS2P35-201ENST00000443417 897 ntBASIC19.93■□□□□ 0.78
APOC4P55056 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.93■□□□□ 0.78
APOC4P55056 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
APOC4P55056 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.92■□□□□ 0.78
APOC4P55056 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
APOC4P55056 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.91■□□□□ 0.78
APOC4P55056 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19.9■□□□□ 0.78
APOC4P55056 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
APOC4P55056 AL162393.1-201ENST00000437852 946 ntBASIC19.9■□□□□ 0.78
APOC4P55056 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APOC4P55056 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
APOC4P55056 MIR762-201ENST00000390236 83 ntBASIC19.89■□□□□ 0.77
APOC4P55056 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC19.89■□□□□ 0.77
APOC4P55056 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
APOC4P55056 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
APOC4P55056 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
APOC4P55056 AC005559.1-201ENST00000589661 871 ntBASIC19.87■□□□□ 0.77
APOC4P55056 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
APOC4P55056 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
APOC4P55056 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
APOC4P55056 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
APOC4P55056 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
APOC4P55056 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
APOC4P55056 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.85■□□□□ 0.77
APOC4P55056 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.85■□□□□ 0.77
APOC4P55056 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.85■□□□□ 0.77
APOC4P55056 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
APOC4P55056 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
APOC4P55056 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.84■□□□□ 0.77
APOC4P55056 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
APOC4P55056 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
APOC4P55056 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.81■□□□□ 0.76
APOC4P55056 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
APOC4P55056 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
APOC4P55056 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
APOC4P55056 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
APOC4P55056 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.79■□□□□ 0.76
APOC4P55056 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.79■□□□□ 0.76
APOC4P55056 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
APOC4P55056 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
APOC4P55056 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
APOC4P55056 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
APOC4P55056 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
APOC4P55056 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.78■□□□□ 0.76
APOC4P55056 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.78■□□□□ 0.76
APOC4P55056 DUX4L28-201ENST00000623687 678 ntBASIC19.78■□□□□ 0.76
APOC4P55056 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
APOC4P55056 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
APOC4P55056 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
APOC4P55056 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
APOC4P55056 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.77■□□□□ 0.76
APOC4P55056 AC044849.2-201ENST00000606596 710 ntBASIC19.77■□□□□ 0.76
APOC4P55056 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
APOC4P55056 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
APOC4P55056 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC19.76■□□□□ 0.75
APOC4P55056 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
APOC4P55056 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
APOC4P55056 AC120057.4-201ENST00000624722 1615 ntBASIC19.75■□□□□ 0.75
APOC4P55056 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
APOC4P55056 AC087741.3-201ENST00000624270 1347 ntBASIC19.74■□□□□ 0.75
APOC4P55056 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
APOC4P55056 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
APOC4P55056 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC19.73■□□□□ 0.75
APOC4P55056 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
APOC4P55056 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
APOC4P55056 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.72■□□□□ 0.75
APOC4P55056 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
APOC4P55056 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.71■□□□□ 0.75
APOC4P55056 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
APOC4P55056 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
APOC4P55056 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
APOC4P55056 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
APOC4P55056 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
APOC4P55056 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
APOC4P55056 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
APOC4P55056 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.69■□□□□ 0.74
APOC4P55056 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APOC4P55056 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC19.68■□□□□ 0.74
APOC4P55056 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
APOC4P55056 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
APOC4P55056 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.66■□□□□ 0.74
APOC4P55056 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOC4P55056 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
APOC4P55056 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.65■□□□□ 0.74
APOC4P55056 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
APOC4P55056 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
APOC4P55056 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOC4P55056 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
APOC4P55056 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
APOC4P55056 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.62■□□□□ 0.73
APOC4P55056 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.62■□□□□ 0.73
APOC4P55056 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
APOC4P55056 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APOC4P55056 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APOC4P55056 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APOC4P55056 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
APOC4P55056 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
APOC4P55056 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms