Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ATP2B1P20020 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.09■■■□□ 2.57
ATP2B1P20020 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.08■■■□□ 2.57
ATP2B1P20020 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
ATP2B1P20020 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
ATP2B1P20020 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
ATP2B1P20020 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
ATP2B1P20020 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
ATP2B1P20020 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
ATP2B1P20020 AL133380.1-201ENST00000506013 324 ntBASIC31.04■■■□□ 2.56
ATP2B1P20020 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
ATP2B1P20020 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
ATP2B1P20020 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
ATP2B1P20020 SETD8P1-201ENST00000623146 1180 ntBASIC31.02■■■□□ 2.56
ATP2B1P20020 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.01■■■□□ 2.56
ATP2B1P20020 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC31■■■□□ 2.55
ATP2B1P20020 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
ATP2B1P20020 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.99■■■□□ 2.55
ATP2B1P20020 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
ATP2B1P20020 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
ATP2B1P20020 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.98■■■□□ 2.55
ATP2B1P20020 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
ATP2B1P20020 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
ATP2B1P20020 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
ATP2B1P20020 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.96■■■□□ 2.55
ATP2B1P20020 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
ATP2B1P20020 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.94■■■□□ 2.54
ATP2B1P20020 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
ATP2B1P20020 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.91■■■□□ 2.54
ATP2B1P20020 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
ATP2B1P20020 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
ATP2B1P20020 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.86■■■□□ 2.53
ATP2B1P20020 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
ATP2B1P20020 AL161658.1-201ENST00000623641 1967 ntBASIC30.86■■■□□ 2.53
ATP2B1P20020 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
ATP2B1P20020 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.85■■■□□ 2.53
ATP2B1P20020 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.85■■■□□ 2.53
ATP2B1P20020 WASH5P-204ENST00000632292 975 ntBASIC30.84■■■□□ 2.53
ATP2B1P20020 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.84■■■□□ 2.53
ATP2B1P20020 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC30.83■■■□□ 2.53
ATP2B1P20020 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
ATP2B1P20020 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
ATP2B1P20020 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
ATP2B1P20020 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
ATP2B1P20020 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.79■■■□□ 2.52
ATP2B1P20020 AC097358.2-201ENST00000607541 1159 ntBASIC30.79■■■□□ 2.52
ATP2B1P20020 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
ATP2B1P20020 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
ATP2B1P20020 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
ATP2B1P20020 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
ATP2B1P20020 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.51
ATP2B1P20020 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
ATP2B1P20020 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.51
ATP2B1P20020 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
ATP2B1P20020 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
ATP2B1P20020 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC30.75■■■□□ 2.51
ATP2B1P20020 AC136428.2-201ENST00000563187 214 ntBASIC30.75■■■□□ 2.51
ATP2B1P20020 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.75■■■□□ 2.51
ATP2B1P20020 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.74■■■□□ 2.51
ATP2B1P20020 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
ATP2B1P20020 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
ATP2B1P20020 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.72■■■□□ 2.51
ATP2B1P20020 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.71■■■□□ 2.51
ATP2B1P20020 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.51
ATP2B1P20020 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
ATP2B1P20020 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.7■■■□□ 2.51
ATP2B1P20020 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
ATP2B1P20020 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.7■■■□□ 2.51
ATP2B1P20020 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
ATP2B1P20020 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
ATP2B1P20020 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
ATP2B1P20020 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ATP2B1P20020 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ATP2B1P20020 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.67■■■□□ 2.5
ATP2B1P20020 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
ATP2B1P20020 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ATP2B1P20020 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
ATP2B1P20020 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.65■■■□□ 2.5
ATP2B1P20020 CAHM-201ENST00000604200 896 ntBASIC30.65■■■□□ 2.5
ATP2B1P20020 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ATP2B1P20020 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
ATP2B1P20020 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
ATP2B1P20020 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
ATP2B1P20020 ABCB10P1-201ENST00000614297 2181 ntBASIC30.63■■■□□ 2.49
ATP2B1P20020 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ATP2B1P20020 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
ATP2B1P20020 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
ATP2B1P20020 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.61■■■□□ 2.49
ATP2B1P20020 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.61■■■□□ 2.49
ATP2B1P20020 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
ATP2B1P20020 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.6■■■□□ 2.49
ATP2B1P20020 AL391121.1-201ENST00000607967 1349 ntBASIC30.6■■■□□ 2.49
ATP2B1P20020 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
ATP2B1P20020 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.59■■■□□ 2.49
ATP2B1P20020 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
ATP2B1P20020 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.58■■■□□ 2.49
ATP2B1P20020 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
ATP2B1P20020 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
ATP2B1P20020 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.54■■■□□ 2.48
ATP2B1P20020 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.53■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms