Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ATP2B1P20020 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.09■■■□□ 2.57
ATP2B1P20020 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.08■■■□□ 2.57
ATP2B1P20020 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
ATP2B1P20020 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
ATP2B1P20020 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
ATP2B1P20020 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
ATP2B1P20020 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
ATP2B1P20020 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
ATP2B1P20020 AL133380.1-201ENST00000506013 324 ntBASIC31.04■■■□□ 2.56
ATP2B1P20020 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
ATP2B1P20020 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
ATP2B1P20020 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
ATP2B1P20020 SETD8P1-201ENST00000623146 1180 ntBASIC31.02■■■□□ 2.56
ATP2B1P20020 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.01■■■□□ 2.56
ATP2B1P20020 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC31■■■□□ 2.55
ATP2B1P20020 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
ATP2B1P20020 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.99■■■□□ 2.55
ATP2B1P20020 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
ATP2B1P20020 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
ATP2B1P20020 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.98■■■□□ 2.55
ATP2B1P20020 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
ATP2B1P20020 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
ATP2B1P20020 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
ATP2B1P20020 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.96■■■□□ 2.55
ATP2B1P20020 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
ATP2B1P20020 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.94■■■□□ 2.54
ATP2B1P20020 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
ATP2B1P20020 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.91■■■□□ 2.54
ATP2B1P20020 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
ATP2B1P20020 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
ATP2B1P20020 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.86■■■□□ 2.53
ATP2B1P20020 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
ATP2B1P20020 AL161658.1-201ENST00000623641 1967 ntBASIC30.86■■■□□ 2.53
ATP2B1P20020 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
ATP2B1P20020 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.85■■■□□ 2.53
ATP2B1P20020 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.85■■■□□ 2.53
ATP2B1P20020 WASH5P-204ENST00000632292 975 ntBASIC30.84■■■□□ 2.53
ATP2B1P20020 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.84■■■□□ 2.53
ATP2B1P20020 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC30.83■■■□□ 2.53
ATP2B1P20020 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
ATP2B1P20020 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
ATP2B1P20020 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
ATP2B1P20020 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
ATP2B1P20020 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.79■■■□□ 2.52
ATP2B1P20020 AC097358.2-201ENST00000607541 1159 ntBASIC30.79■■■□□ 2.52
ATP2B1P20020 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
ATP2B1P20020 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
ATP2B1P20020 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
ATP2B1P20020 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
ATP2B1P20020 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.51
ATP2B1P20020 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
ATP2B1P20020 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.51
ATP2B1P20020 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
ATP2B1P20020 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
ATP2B1P20020 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC30.75■■■□□ 2.51
ATP2B1P20020 AC136428.2-201ENST00000563187 214 ntBASIC30.75■■■□□ 2.51
ATP2B1P20020 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.75■■■□□ 2.51
ATP2B1P20020 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.74■■■□□ 2.51
ATP2B1P20020 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
ATP2B1P20020 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
ATP2B1P20020 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.72■■■□□ 2.51
ATP2B1P20020 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.71■■■□□ 2.51
ATP2B1P20020 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.51
ATP2B1P20020 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
ATP2B1P20020 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.7■■■□□ 2.51
ATP2B1P20020 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
ATP2B1P20020 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.7■■■□□ 2.51
ATP2B1P20020 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
ATP2B1P20020 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
ATP2B1P20020 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
ATP2B1P20020 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ATP2B1P20020 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ATP2B1P20020 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.67■■■□□ 2.5
ATP2B1P20020 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
ATP2B1P20020 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ATP2B1P20020 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
ATP2B1P20020 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.65■■■□□ 2.5
ATP2B1P20020 CAHM-201ENST00000604200 896 ntBASIC30.65■■■□□ 2.5
ATP2B1P20020 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ATP2B1P20020 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
ATP2B1P20020 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
ATP2B1P20020 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
ATP2B1P20020 ABCB10P1-201ENST00000614297 2181 ntBASIC30.63■■■□□ 2.49
ATP2B1P20020 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ATP2B1P20020 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
ATP2B1P20020 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
ATP2B1P20020 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.61■■■□□ 2.49
ATP2B1P20020 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.61■■■□□ 2.49
ATP2B1P20020 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
ATP2B1P20020 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.6■■■□□ 2.49
ATP2B1P20020 AL391121.1-201ENST00000607967 1349 ntBASIC30.6■■■□□ 2.49
ATP2B1P20020 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
ATP2B1P20020 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.59■■■□□ 2.49
ATP2B1P20020 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
ATP2B1P20020 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.58■■■□□ 2.49
ATP2B1P20020 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
ATP2B1P20020 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
ATP2B1P20020 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.54■■■□□ 2.48
ATP2B1P20020 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.53■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms