Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.31■■■□□ 2.6
CAPN2P17655 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CAPN2P17655 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CAPN2P17655 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.29■■■□□ 2.6
CAPN2P17655 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
CAPN2P17655 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CAPN2P17655 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
CAPN2P17655 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
CAPN2P17655 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CAPN2P17655 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
CAPN2P17655 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CAPN2P17655 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.27■■■□□ 2.6
CAPN2P17655 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.24■■■□□ 2.59
CAPN2P17655 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CAPN2P17655 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.23■■■□□ 2.59
CAPN2P17655 MIR639-201ENST00000384974 98 ntBASIC31.21■■■□□ 2.59
CAPN2P17655 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CAPN2P17655 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CAPN2P17655 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CAPN2P17655 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.19■■■□□ 2.58
CAPN2P17655 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CAPN2P17655 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
CAPN2P17655 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CAPN2P17655 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CAPN2P17655 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.15■■■□□ 2.58
CAPN2P17655 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CAPN2P17655 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CAPN2P17655 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.13■■■□□ 2.57
CAPN2P17655 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.13■■■□□ 2.57
CAPN2P17655 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.12■■■□□ 2.57
CAPN2P17655 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
CAPN2P17655 DUX4L29-201ENST00000425409 679 ntBASIC31.12■■■□□ 2.57
CAPN2P17655 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
CAPN2P17655 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CAPN2P17655 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CAPN2P17655 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.08■■■□□ 2.57
CAPN2P17655 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.06■■■□□ 2.56
CAPN2P17655 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CAPN2P17655 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.05■■■□□ 2.56
CAPN2P17655 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CAPN2P17655 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CAPN2P17655 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CAPN2P17655 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.04■■■□□ 2.56
CAPN2P17655 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
CAPN2P17655 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CAPN2P17655 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.03■■■□□ 2.56
CAPN2P17655 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
CAPN2P17655 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CAPN2P17655 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
CAPN2P17655 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
CAPN2P17655 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.01■■■□□ 2.55
CAPN2P17655 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
CAPN2P17655 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CAPN2P17655 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CAPN2P17655 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.96■■■□□ 2.55
CAPN2P17655 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.95■■■□□ 2.55
CAPN2P17655 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.95■■■□□ 2.55
CAPN2P17655 HSD17B1P1-201ENST00000590052 955 ntBASIC30.94■■■□□ 2.54
CAPN2P17655 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CAPN2P17655 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.93■■■□□ 2.54
CAPN2P17655 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CAPN2P17655 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.89■■■□□ 2.54
CAPN2P17655 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.89■■■□□ 2.54
CAPN2P17655 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CAPN2P17655 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.88■■■□□ 2.53
CAPN2P17655 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
CAPN2P17655 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.87■■■□□ 2.53
CAPN2P17655 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.87■■■□□ 2.53
CAPN2P17655 MIR3648-2-201ENST00000581792 180 ntBASIC30.87■■■□□ 2.53
CAPN2P17655 MIR3648-1-201ENST00000615959 180 ntBASIC30.87■■■□□ 2.53
CAPN2P17655 WASH5P-204ENST00000632292 975 ntBASIC30.87■■■□□ 2.53
CAPN2P17655 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
CAPN2P17655 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.86■■■□□ 2.53
CAPN2P17655 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.83■■■□□ 2.53
CAPN2P17655 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CAPN2P17655 AC021231.2-201ENST00000594613 730 ntBASIC30.83■■■□□ 2.53
CAPN2P17655 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
CAPN2P17655 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CAPN2P17655 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.81■■■□□ 2.52
CAPN2P17655 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.8■■■□□ 2.52
CAPN2P17655 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.8■■■□□ 2.52
CAPN2P17655 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.8■■■□□ 2.52
CAPN2P17655 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.79■■■□□ 2.52
CAPN2P17655 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.79■■■□□ 2.52
CAPN2P17655 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CAPN2P17655 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CAPN2P17655 AC016575.1-201ENST00000607026 382 ntBASIC30.77■■■□□ 2.52
CAPN2P17655 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CAPN2P17655 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.75■■■□□ 2.51
CAPN2P17655 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.75■■■□□ 2.51
CAPN2P17655 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CAPN2P17655 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
CAPN2P17655 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.73■■■□□ 2.51
CAPN2P17655 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CAPN2P17655 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
CAPN2P17655 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.72■■■□□ 2.51
CAPN2P17655 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CAPN2P17655 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
CAPN2P17655 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.72■■■□□ 2.51
CAPN2P17655 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms