Protein–RNA interactions for Protein: P08519

LPA, Apolipoprotein(a), humanhuman

Predictions only

Length 4,548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPAP08519 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LPAP08519 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LPAP08519 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC15.44■□□□□ 0.06
LPAP08519 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LPAP08519 DENR-202ENST00000455982 1052 ntTSL 5 BASIC15.41■□□□□ 0.06
LPAP08519 MIR639-201ENST00000384974 98 ntBASIC15.4■□□□□ 0.06
LPAP08519 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LPAP08519 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPAP08519 BOD1-206ENST00000480951 814 ntTSL 2 BASIC15.4■□□□□ 0.06
LPAP08519 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC15.4■□□□□ 0.06
LPAP08519 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPAP08519 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPAP08519 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC15.4■□□□□ 0.06
LPAP08519 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC15.39■□□□□ 0.05
LPAP08519 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC15.39■□□□□ 0.05
LPAP08519 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC15.38■□□□□ 0.05
LPAP08519 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LPAP08519 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC15.37■□□□□ 0.05
LPAP08519 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LPAP08519 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
LPAP08519 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LPAP08519 AC021231.2-201ENST00000594613 730 ntBASIC15.36■□□□□ 0.05
LPAP08519 MACF1-219ENST00000484793 834 ntTSL 2 BASIC15.35■□□□□ 0.05
LPAP08519 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LPAP08519 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC15.35■□□□□ 0.05
LPAP08519 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC15.34■□□□□ 0.05
LPAP08519 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC15.34■□□□□ 0.05
LPAP08519 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC15.33■□□□□ 0.04
LPAP08519 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC15.33■□□□□ 0.04
LPAP08519 MIR3648-2-201ENST00000581792 180 ntBASIC15.33■□□□□ 0.04
LPAP08519 MIR3648-1-201ENST00000615959 180 ntBASIC15.33■□□□□ 0.04
LPAP08519 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPAP08519 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LPAP08519 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPAP08519 CR559946.2-201ENST00000623684 991 ntBASIC15.32■□□□□ 0.04
LPAP08519 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LPAP08519 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC15.32■□□□□ 0.04
LPAP08519 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LPAP08519 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LPAP08519 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LPAP08519 AC016575.1-201ENST00000607026 382 ntBASIC15.3■□□□□ 0.04
LPAP08519 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LPAP08519 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LPAP08519 RNF166-209ENST00000567844 633 ntTSL 5 BASIC15.29■□□□□ 0.04
LPAP08519 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LPAP08519 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LPAP08519 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LPAP08519 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LPAP08519 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LPAP08519 CALM3-209ENST00000597743 577 ntTSL 4 BASIC15.26■□□□□ 0.03
LPAP08519 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC15.25■□□□□ 0.03
LPAP08519 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC15.25■□□□□ 0.03
LPAP08519 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LPAP08519 BRD4-212ENST00000630599 726 ntTSL 2 BASIC15.25■□□□□ 0.03
LPAP08519 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC15.25■□□□□ 0.03
LPAP08519 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LPAP08519 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LPAP08519 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LPAP08519 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LPAP08519 DUX4L29-201ENST00000425409 679 ntBASIC15.24■□□□□ 0.03
LPAP08519 GDI1-215ENST00000630693 786 ntTSL 4 BASIC15.24■□□□□ 0.03
LPAP08519 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LPAP08519 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LPAP08519 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LPAP08519 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LPAP08519 ABHD17AP3-201ENST00000503096 1137 ntBASIC15.22■□□□□ 0.03
LPAP08519 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LPAP08519 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LPAP08519 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
LPAP08519 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC15.21■□□□□ 0.03
LPAP08519 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
LPAP08519 WASH5P-204ENST00000632292 975 ntBASIC15.2■□□□□ 0.02
LPAP08519 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC15.2■□□□□ 0.02
LPAP08519 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC15.19■□□□□ 0.02
LPAP08519 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LPAP08519 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LPAP08519 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LPAP08519 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LPAP08519 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPAP08519 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPAP08519 MIR6090-201ENST00000622481 60 ntBASIC15.18■□□□□ 0.02
LPAP08519 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LPAP08519 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC15.17■□□□□ 0.02
LPAP08519 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPAP08519 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPAP08519 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LPAP08519 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC15.16■□□□□ 0.02
LPAP08519 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC15.15■□□□□ 0.02
LPAP08519 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
LPAP08519 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC15.15■□□□□ 0.02
LPAP08519 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LPAP08519 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LPAP08519 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LPAP08519 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LPAP08519 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
LPAP08519 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LPAP08519 RPS2-209ENST00000529806 993 ntTSL 3 BASIC15.14■□□□□ 0.01
LPAP08519 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LPAP08519 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LPAP08519 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms