Protein–RNA interactions for Protein: O60882

MMP20, Matrix metalloproteinase-20, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP20O60882 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.23■■□□□ 1.95
MMP20O60882 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
MMP20O60882 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
MMP20O60882 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.21■■□□□ 1.95
MMP20O60882 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
MMP20O60882 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
MMP20O60882 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.2■■□□□ 1.94
MMP20O60882 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC27.2■■□□□ 1.94
MMP20O60882 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC27.18■■□□□ 1.94
MMP20O60882 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC27.17■■□□□ 1.94
MMP20O60882 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
MMP20O60882 AL162393.1-201ENST00000437852 946 ntBASIC27.15■■□□□ 1.94
MMP20O60882 NRG1-221ENST00000614767 762 ntTSL 5 BASIC27.15■■□□□ 1.94
MMP20O60882 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.14■■□□□ 1.94
MMP20O60882 AP006261.1-201ENST00000584783 668 ntBASIC27.14■■□□□ 1.94
MMP20O60882 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
MMP20O60882 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
MMP20O60882 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
MMP20O60882 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
MMP20O60882 MIR762-201ENST00000390236 83 ntBASIC27.12■■□□□ 1.93
MMP20O60882 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
MMP20O60882 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
MMP20O60882 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.1■■□□□ 1.93
MMP20O60882 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.09■■□□□ 1.93
MMP20O60882 AC120057.4-201ENST00000624722 1615 ntBASIC27.08■■□□□ 1.93
MMP20O60882 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.06■■□□□ 1.92
MMP20O60882 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.05■■□□□ 1.92
MMP20O60882 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.04■■□□□ 1.92
MMP20O60882 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
MMP20O60882 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
MMP20O60882 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.04■■□□□ 1.92
MMP20O60882 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
MMP20O60882 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
MMP20O60882 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
MMP20O60882 MIR3665-201ENST00000578708 105 ntBASIC27.03■■□□□ 1.92
MMP20O60882 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.03■■□□□ 1.92
MMP20O60882 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
MMP20O60882 DUX4L28-201ENST00000623687 678 ntBASIC27.02■■□□□ 1.92
MMP20O60882 AC005559.1-201ENST00000589661 871 ntBASIC27.01■■□□□ 1.91
MMP20O60882 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27■■□□□ 1.91
MMP20O60882 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.99■■□□□ 1.91
MMP20O60882 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
MMP20O60882 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
MMP20O60882 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.99■■□□□ 1.91
MMP20O60882 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
MMP20O60882 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
MMP20O60882 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
MMP20O60882 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
MMP20O60882 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
MMP20O60882 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
MMP20O60882 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
MMP20O60882 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
MMP20O60882 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
MMP20O60882 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
MMP20O60882 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
MMP20O60882 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
MMP20O60882 AC087741.3-201ENST00000624270 1347 ntBASIC26.91■■□□□ 1.9
MMP20O60882 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
MMP20O60882 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.91■■□□□ 1.9
MMP20O60882 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
MMP20O60882 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
MMP20O60882 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.9■■□□□ 1.9
MMP20O60882 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
MMP20O60882 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.9■■□□□ 1.9
MMP20O60882 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
MMP20O60882 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
MMP20O60882 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
MMP20O60882 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
MMP20O60882 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
MMP20O60882 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.85■■□□□ 1.89
MMP20O60882 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
MMP20O60882 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
MMP20O60882 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
MMP20O60882 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
MMP20O60882 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.84■■□□□ 1.89
MMP20O60882 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
MMP20O60882 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
MMP20O60882 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
MMP20O60882 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
MMP20O60882 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.8■■□□□ 1.88
MMP20O60882 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.8■■□□□ 1.88
MMP20O60882 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
MMP20O60882 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
MMP20O60882 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.79■■□□□ 1.88
MMP20O60882 AC044849.2-201ENST00000606596 710 ntBASIC26.78■■□□□ 1.88
MMP20O60882 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
MMP20O60882 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
MMP20O60882 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
MMP20O60882 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
MMP20O60882 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
MMP20O60882 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
MMP20O60882 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
MMP20O60882 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
MMP20O60882 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.74■■□□□ 1.87
MMP20O60882 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
MMP20O60882 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
MMP20O60882 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.73■■□□□ 1.87
MMP20O60882 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
MMP20O60882 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
MMP20O60882 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.72■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms