Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CACNB4O00305 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CACNB4O00305 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CACNB4O00305 AL162393.1-201ENST00000437852 946 ntBASIC26.91■■□□□ 1.9
CACNB4O00305 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CACNB4O00305 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CACNB4O00305 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.89■■□□□ 1.9
CACNB4O00305 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
CACNB4O00305 MIR762-201ENST00000390236 83 ntBASIC26.88■■□□□ 1.89
CACNB4O00305 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.88■■□□□ 1.89
CACNB4O00305 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.88■■□□□ 1.89
CACNB4O00305 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.87■■□□□ 1.89
CACNB4O00305 MIR3665-201ENST00000578708 105 ntBASIC26.87■■□□□ 1.89
CACNB4O00305 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CACNB4O00305 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.87■■□□□ 1.89
CACNB4O00305 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
CACNB4O00305 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CACNB4O00305 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.86■■□□□ 1.89
CACNB4O00305 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.86■■□□□ 1.89
CACNB4O00305 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
CACNB4O00305 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CACNB4O00305 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CACNB4O00305 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.85■■□□□ 1.89
CACNB4O00305 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CACNB4O00305 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CACNB4O00305 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.82■■□□□ 1.88
CACNB4O00305 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CACNB4O00305 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CACNB4O00305 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CACNB4O00305 AC005559.1-201ENST00000589661 871 ntBASIC26.8■■□□□ 1.88
CACNB4O00305 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.8■■□□□ 1.88
CACNB4O00305 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CACNB4O00305 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CACNB4O00305 DUX4L28-201ENST00000623687 678 ntBASIC26.76■■□□□ 1.87
CACNB4O00305 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CACNB4O00305 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.75■■□□□ 1.87
CACNB4O00305 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.75■■□□□ 1.87
CACNB4O00305 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
CACNB4O00305 AC120057.4-201ENST00000624722 1615 ntBASIC26.72■■□□□ 1.87
CACNB4O00305 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CACNB4O00305 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CACNB4O00305 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CACNB4O00305 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.7■■□□□ 1.86
CACNB4O00305 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.69■■□□□ 1.86
CACNB4O00305 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.69■■□□□ 1.86
CACNB4O00305 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
CACNB4O00305 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CACNB4O00305 AC087741.3-201ENST00000624270 1347 ntBASIC26.67■■□□□ 1.86
CACNB4O00305 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
CACNB4O00305 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.67■■□□□ 1.86
CACNB4O00305 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
CACNB4O00305 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CACNB4O00305 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CACNB4O00305 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CACNB4O00305 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CACNB4O00305 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CACNB4O00305 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.65■■□□□ 1.86
CACNB4O00305 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.65■■□□□ 1.86
CACNB4O00305 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.65■■□□□ 1.86
CACNB4O00305 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.65■■□□□ 1.86
CACNB4O00305 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CACNB4O00305 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CACNB4O00305 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.62■■□□□ 1.85
CACNB4O00305 AC044849.2-201ENST00000606596 710 ntBASIC26.62■■□□□ 1.85
CACNB4O00305 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CACNB4O00305 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CACNB4O00305 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CACNB4O00305 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
CACNB4O00305 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CACNB4O00305 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.59■■□□□ 1.85
CACNB4O00305 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CACNB4O00305 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
CACNB4O00305 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
CACNB4O00305 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.56■■□□□ 1.84
CACNB4O00305 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CACNB4O00305 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CACNB4O00305 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CACNB4O00305 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CACNB4O00305 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
CACNB4O00305 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
CACNB4O00305 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CACNB4O00305 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CACNB4O00305 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
CACNB4O00305 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.52■■□□□ 1.84
CACNB4O00305 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.52■■□□□ 1.84
CACNB4O00305 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CACNB4O00305 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CACNB4O00305 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CACNB4O00305 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
CACNB4O00305 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CACNB4O00305 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.5■■□□□ 1.83
CACNB4O00305 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
CACNB4O00305 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CACNB4O00305 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
CACNB4O00305 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CACNB4O00305 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
CACNB4O00305 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.48■■□□□ 1.83
CACNB4O00305 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CACNB4O00305 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CACNB4O00305 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms