Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CDHR4A6H8M9 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.02■■□□□ 1.6
CDHR4A6H8M9 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
CDHR4A6H8M9 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDHR4A6H8M9 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25■■□□□ 1.59
CDHR4A6H8M9 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25■■□□□ 1.59
CDHR4A6H8M9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CDHR4A6H8M9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDHR4A6H8M9 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDHR4A6H8M9 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC24.94■■□□□ 1.58
CDHR4A6H8M9 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.93■■□□□ 1.58
CDHR4A6H8M9 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDHR4A6H8M9 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
CDHR4A6H8M9 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CDHR4A6H8M9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDHR4A6H8M9 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC24.9■■□□□ 1.58
CDHR4A6H8M9 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC24.9■■□□□ 1.58
CDHR4A6H8M9 KLF16-203ENST00000592313 508 ntTSL 3 BASIC24.89■■□□□ 1.58
CDHR4A6H8M9 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CDHR4A6H8M9 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC24.88■■□□□ 1.57
CDHR4A6H8M9 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CDHR4A6H8M9 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.87■■□□□ 1.57
CDHR4A6H8M9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDHR4A6H8M9 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.85■■□□□ 1.57
CDHR4A6H8M9 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC24.83■■□□□ 1.57
CDHR4A6H8M9 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CDHR4A6H8M9 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDHR4A6H8M9 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC24.81■■□□□ 1.56
CDHR4A6H8M9 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDHR4A6H8M9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDHR4A6H8M9 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CDHR4A6H8M9 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDHR4A6H8M9 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.78■■□□□ 1.56
CDHR4A6H8M9 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDHR4A6H8M9 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDHR4A6H8M9 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CDHR4A6H8M9 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
CDHR4A6H8M9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC24.78■■□□□ 1.56
CDHR4A6H8M9 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CDHR4A6H8M9 AL161658.1-201ENST00000623641 1967 ntBASIC24.77■■□□□ 1.56
CDHR4A6H8M9 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC24.77■■□□□ 1.56
CDHR4A6H8M9 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC24.76■■□□□ 1.55
CDHR4A6H8M9 AL133380.1-201ENST00000506013 324 ntBASIC24.76■■□□□ 1.55
CDHR4A6H8M9 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.76■■□□□ 1.55
CDHR4A6H8M9 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.75■■□□□ 1.55
CDHR4A6H8M9 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDHR4A6H8M9 ABCB10P1-201ENST00000614297 2181 ntBASIC24.74■■□□□ 1.55
CDHR4A6H8M9 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CDHR4A6H8M9 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDHR4A6H8M9 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDHR4A6H8M9 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
CDHR4A6H8M9 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.7■■□□□ 1.55
CDHR4A6H8M9 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
CDHR4A6H8M9 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
CDHR4A6H8M9 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CDHR4A6H8M9 WASH5P-204ENST00000632292 975 ntBASIC24.69■■□□□ 1.54
CDHR4A6H8M9 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
CDHR4A6H8M9 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDHR4A6H8M9 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CDHR4A6H8M9 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CDHR4A6H8M9 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC24.67■■□□□ 1.54
CDHR4A6H8M9 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDHR4A6H8M9 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CDHR4A6H8M9 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CDHR4A6H8M9 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
CDHR4A6H8M9 RARRES2P7-201ENST00000567349 469 ntBASIC24.64■■□□□ 1.54
CDHR4A6H8M9 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CDHR4A6H8M9 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.53
CDHR4A6H8M9 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
CDHR4A6H8M9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.63■■□□□ 1.53
CDHR4A6H8M9 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CDHR4A6H8M9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CDHR4A6H8M9 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDHR4A6H8M9 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CDHR4A6H8M9 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDHR4A6H8M9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
CDHR4A6H8M9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CDHR4A6H8M9 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CDHR4A6H8M9 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CDHR4A6H8M9 SETD8P1-201ENST00000623146 1180 ntBASIC24.57■■□□□ 1.52
CDHR4A6H8M9 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
CDHR4A6H8M9 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CDHR4A6H8M9 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.56■■□□□ 1.52
CDHR4A6H8M9 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CDHR4A6H8M9 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CDHR4A6H8M9 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CDHR4A6H8M9 ST7-AS1-201ENST00000456775 1889 ntBASIC24.55■■□□□ 1.52
CDHR4A6H8M9 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.55■■□□□ 1.52
CDHR4A6H8M9 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CDHR4A6H8M9 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CDHR4A6H8M9 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CDHR4A6H8M9 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CDHR4A6H8M9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CDHR4A6H8M9 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CDHR4A6H8M9 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CDHR4A6H8M9 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CDHR4A6H8M9 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
CDHR4A6H8M9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC24.51■■□□□ 1.51
CDHR4A6H8M9 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
CDHR4A6H8M9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms