Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
DENND4AQ7Z401 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.6■■□□□ 1.21
DENND4AQ7Z401 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
DENND4AQ7Z401 LINC01124-201ENST00000409786 2117 ntBASIC22.6■■□□□ 1.21
DENND4AQ7Z401 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
DENND4AQ7Z401 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
DENND4AQ7Z401 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
DENND4AQ7Z401 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.6■■□□□ 1.21
DENND4AQ7Z401 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
DENND4AQ7Z401 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
DENND4AQ7Z401 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.59■■□□□ 1.21
DENND4AQ7Z401 AL139125.2-201ENST00000623134 1869 ntBASIC22.59■■□□□ 1.21
DENND4AQ7Z401 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
DENND4AQ7Z401 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
DENND4AQ7Z401 CYP2T1P-201ENST00000432607 1285 ntBASIC22.59■■□□□ 1.21
DENND4AQ7Z401 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
DENND4AQ7Z401 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
DENND4AQ7Z401 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
DENND4AQ7Z401 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
DENND4AQ7Z401 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
DENND4AQ7Z401 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
DENND4AQ7Z401 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
DENND4AQ7Z401 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
DENND4AQ7Z401 OXCT2P1-201ENST00000447263 1535 ntBASIC22.58■■□□□ 1.2
DENND4AQ7Z401 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
DENND4AQ7Z401 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.58■■□□□ 1.2
DENND4AQ7Z401 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
DENND4AQ7Z401 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.57■■□□□ 1.2
DENND4AQ7Z401 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
DENND4AQ7Z401 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
DENND4AQ7Z401 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.57■■□□□ 1.2
DENND4AQ7Z401 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.57■■□□□ 1.2
DENND4AQ7Z401 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.57■■□□□ 1.2
DENND4AQ7Z401 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
DENND4AQ7Z401 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
DENND4AQ7Z401 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
DENND4AQ7Z401 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
DENND4AQ7Z401 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
DENND4AQ7Z401 AC010141.2-201ENST00000452426 721 ntBASIC22.56■■□□□ 1.2
DENND4AQ7Z401 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
DENND4AQ7Z401 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
DENND4AQ7Z401 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
DENND4AQ7Z401 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
DENND4AQ7Z401 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
DENND4AQ7Z401 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
DENND4AQ7Z401 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.56■■□□□ 1.2
DENND4AQ7Z401 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
DENND4AQ7Z401 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.56■■□□□ 1.2
DENND4AQ7Z401 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.56■■□□□ 1.2
DENND4AQ7Z401 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.56■■□□□ 1.2
DENND4AQ7Z401 AC133552.2-202ENST00000575694 574 ntBASIC22.56■■□□□ 1.2
DENND4AQ7Z401 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.56■■□□□ 1.2
DENND4AQ7Z401 TBCB-214ENST00000629269 413 ntTSL 5 BASIC22.56■■□□□ 1.2
DENND4AQ7Z401 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
DENND4AQ7Z401 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.56■■□□□ 1.2
DENND4AQ7Z401 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
DENND4AQ7Z401 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
DENND4AQ7Z401 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
DENND4AQ7Z401 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.55■■□□□ 1.2
DENND4AQ7Z401 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
DENND4AQ7Z401 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
DENND4AQ7Z401 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
DENND4AQ7Z401 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.54■■□□□ 1.2
DENND4AQ7Z401 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.54■■□□□ 1.2
DENND4AQ7Z401 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
DENND4AQ7Z401 KRT18P20-201ENST00000548986 1279 ntBASIC22.54■■□□□ 1.2
DENND4AQ7Z401 AL353803.4-201ENST00000565882 1934 ntBASIC22.54■■□□□ 1.2
DENND4AQ7Z401 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
DENND4AQ7Z401 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.54■■□□□ 1.2
DENND4AQ7Z401 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
DENND4AQ7Z401 DUSP8P3-201ENST00000399571 1760 ntBASIC22.54■■□□□ 1.2
DENND4AQ7Z401 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
DENND4AQ7Z401 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
DENND4AQ7Z401 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
DENND4AQ7Z401 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.54■■□□□ 1.2
DENND4AQ7Z401 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
DENND4AQ7Z401 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
DENND4AQ7Z401 AC138907.5-202ENST00000569484 235 ntBASIC22.54■■□□□ 1.2
DENND4AQ7Z401 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
DENND4AQ7Z401 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
DENND4AQ7Z401 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.53■■□□□ 1.2
DENND4AQ7Z401 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
DENND4AQ7Z401 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC22.53■■□□□ 1.2
DENND4AQ7Z401 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
DENND4AQ7Z401 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC22.53■■□□□ 1.2
DENND4AQ7Z401 AC010536.3-201ENST00000620306 533 ntBASIC22.53■■□□□ 1.2
DENND4AQ7Z401 AC013268.1-206ENST00000638368 961 ntBASIC22.53■■□□□ 1.2
DENND4AQ7Z401 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.53■■□□□ 1.2
DENND4AQ7Z401 AC112229.1-201ENST00000639295 961 ntBASIC22.53■■□□□ 1.2
DENND4AQ7Z401 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
DENND4AQ7Z401 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
DENND4AQ7Z401 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.52■■□□□ 1.2
DENND4AQ7Z401 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.52■■□□□ 1.2
DENND4AQ7Z401 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
DENND4AQ7Z401 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC22.52■■□□□ 1.2
DENND4AQ7Z401 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
DENND4AQ7Z401 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
DENND4AQ7Z401 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.52■■□□□ 1.19
DENND4AQ7Z401 ITM2C-210ENST00000620962 501 ntBASIC22.51■■□□□ 1.19
DENND4AQ7Z401 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms