Protein–RNA interactions for Protein: Q9H5V9

CXorf56, UPF0428 protein CXorf56, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXorf56Q9H5V9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CXorf56Q9H5V9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CXorf56Q9H5V9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CXorf56Q9H5V9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.03■□□□□ 0.96
CXorf56Q9H5V9 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CXorf56Q9H5V9 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.03■□□□□ 0.96
CXorf56Q9H5V9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.03■□□□□ 0.96
CXorf56Q9H5V9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CXorf56Q9H5V9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CXorf56Q9H5V9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CXorf56Q9H5V9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CXorf56Q9H5V9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CXorf56Q9H5V9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CXorf56Q9H5V9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
CXorf56Q9H5V9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
CXorf56Q9H5V9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CXorf56Q9H5V9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.02■□□□□ 0.96
CXorf56Q9H5V9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.02■□□□□ 0.96
CXorf56Q9H5V9 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CXorf56Q9H5V9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CXorf56Q9H5V9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CXorf56Q9H5V9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CXorf56Q9H5V9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
CXorf56Q9H5V9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CXorf56Q9H5V9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CXorf56Q9H5V9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.02■□□□□ 0.96
CXorf56Q9H5V9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CXorf56Q9H5V9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CXorf56Q9H5V9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CXorf56Q9H5V9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CXorf56Q9H5V9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CXorf56Q9H5V9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CXorf56Q9H5V9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CXorf56Q9H5V9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CXorf56Q9H5V9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
CXorf56Q9H5V9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.02■□□□□ 0.95
CXorf56Q9H5V9 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CXorf56Q9H5V9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CXorf56Q9H5V9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CXorf56Q9H5V9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.01■□□□□ 0.95
CXorf56Q9H5V9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CXorf56Q9H5V9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CXorf56Q9H5V9 KRT8P33-201ENST00000508125 1423 ntBASIC21.01■□□□□ 0.95
CXorf56Q9H5V9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.01■□□□□ 0.95
CXorf56Q9H5V9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.01■□□□□ 0.95
CXorf56Q9H5V9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CXorf56Q9H5V9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CXorf56Q9H5V9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CXorf56Q9H5V9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.01■□□□□ 0.95
CXorf56Q9H5V9 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CXorf56Q9H5V9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CXorf56Q9H5V9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CXorf56Q9H5V9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21■□□□□ 0.95
CXorf56Q9H5V9 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21■□□□□ 0.95
CXorf56Q9H5V9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21■□□□□ 0.95
CXorf56Q9H5V9 SPCS2P3-201ENST00000500401 656 ntBASIC21■□□□□ 0.95
CXorf56Q9H5V9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21■□□□□ 0.95
CXorf56Q9H5V9 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21■□□□□ 0.95
CXorf56Q9H5V9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CXorf56Q9H5V9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21■□□□□ 0.95
CXorf56Q9H5V9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21■□□□□ 0.95
CXorf56Q9H5V9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CXorf56Q9H5V9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CXorf56Q9H5V9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CXorf56Q9H5V9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
CXorf56Q9H5V9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CXorf56Q9H5V9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CXorf56Q9H5V9 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CXorf56Q9H5V9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CXorf56Q9H5V9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CXorf56Q9H5V9 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CXorf56Q9H5V9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CXorf56Q9H5V9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CXorf56Q9H5V9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CXorf56Q9H5V9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
CXorf56Q9H5V9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CXorf56Q9H5V9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CXorf56Q9H5V9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CXorf56Q9H5V9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CXorf56Q9H5V9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CXorf56Q9H5V9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CXorf56Q9H5V9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.98■□□□□ 0.95
CXorf56Q9H5V9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CXorf56Q9H5V9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CXorf56Q9H5V9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CXorf56Q9H5V9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CXorf56Q9H5V9 ESRRAP2-201ENST00000418437 1549 ntBASIC20.98■□□□□ 0.95
CXorf56Q9H5V9 AC092068.2-201ENST00000590491 1708 ntBASIC20.98■□□□□ 0.95
CXorf56Q9H5V9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.98■□□□□ 0.95
CXorf56Q9H5V9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CXorf56Q9H5V9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CXorf56Q9H5V9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CXorf56Q9H5V9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CXorf56Q9H5V9 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CXorf56Q9H5V9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.97■□□□□ 0.95
CXorf56Q9H5V9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.97■□□□□ 0.95
CXorf56Q9H5V9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CXorf56Q9H5V9 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CXorf56Q9H5V9 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CXorf56Q9H5V9 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms