Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.2■□□□□ 0.99
ATL1Q8WXF7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
ATL1Q8WXF7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.2■□□□□ 0.98
ATL1Q8WXF7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.2■□□□□ 0.98
ATL1Q8WXF7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATL1Q8WXF7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATL1Q8WXF7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATL1Q8WXF7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATL1Q8WXF7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATL1Q8WXF7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
ATL1Q8WXF7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATL1Q8WXF7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATL1Q8WXF7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ATL1Q8WXF7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATL1Q8WXF7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ATL1Q8WXF7 AC080038.3-201ENST00000623346 1952 ntBASIC21.19■□□□□ 0.98
ATL1Q8WXF7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATL1Q8WXF7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.19■□□□□ 0.98
ATL1Q8WXF7 AL136162.1-201ENST00000607711 1078 ntBASIC21.19■□□□□ 0.98
ATL1Q8WXF7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATL1Q8WXF7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATL1Q8WXF7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATL1Q8WXF7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATL1Q8WXF7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATL1Q8WXF7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ATL1Q8WXF7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
ATL1Q8WXF7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
ATL1Q8WXF7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATL1Q8WXF7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.18■□□□□ 0.98
ATL1Q8WXF7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATL1Q8WXF7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
ATL1Q8WXF7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATL1Q8WXF7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
ATL1Q8WXF7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATL1Q8WXF7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.18■□□□□ 0.98
ATL1Q8WXF7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.18■□□□□ 0.98
ATL1Q8WXF7 AC092053.2-201ENST00000640557 1818 ntBASIC21.18■□□□□ 0.98
ATL1Q8WXF7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.17■□□□□ 0.98
ATL1Q8WXF7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATL1Q8WXF7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATL1Q8WXF7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.17■□□□□ 0.98
ATL1Q8WXF7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATL1Q8WXF7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.17■□□□□ 0.98
ATL1Q8WXF7 AC010525.1-201ENST00000585559 441 ntBASIC21.17■□□□□ 0.98
ATL1Q8WXF7 AC135279.3-201ENST00000610945 1311 ntBASIC21.17■□□□□ 0.98
ATL1Q8WXF7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATL1Q8WXF7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATL1Q8WXF7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.17■□□□□ 0.98
ATL1Q8WXF7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.17■□□□□ 0.98
ATL1Q8WXF7 AC139530.1-201ENST00000575312 1977 ntBASIC21.17■□□□□ 0.98
ATL1Q8WXF7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATL1Q8WXF7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATL1Q8WXF7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATL1Q8WXF7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATL1Q8WXF7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATL1Q8WXF7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.16■□□□□ 0.98
ATL1Q8WXF7 AC010141.3-201ENST00000456659 717 ntBASIC21.16■□□□□ 0.98
ATL1Q8WXF7 AP005435.1-201ENST00000529293 1178 ntBASIC21.16■□□□□ 0.98
ATL1Q8WXF7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.16■□□□□ 0.98
ATL1Q8WXF7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.16■□□□□ 0.98
ATL1Q8WXF7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.16■□□□□ 0.98
ATL1Q8WXF7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.16■□□□□ 0.98
ATL1Q8WXF7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATL1Q8WXF7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ATL1Q8WXF7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATL1Q8WXF7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ATL1Q8WXF7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATL1Q8WXF7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATL1Q8WXF7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.15■□□□□ 0.98
ATL1Q8WXF7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.15■□□□□ 0.98
ATL1Q8WXF7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
ATL1Q8WXF7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.15■□□□□ 0.98
ATL1Q8WXF7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.15■□□□□ 0.98
ATL1Q8WXF7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATL1Q8WXF7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.15■□□□□ 0.98
ATL1Q8WXF7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATL1Q8WXF7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATL1Q8WXF7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.15■□□□□ 0.98
ATL1Q8WXF7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATL1Q8WXF7 SLC47A1P1-202ENST00000449666 945 ntBASIC21.15■□□□□ 0.98
ATL1Q8WXF7 AC079089.2-201ENST00000531211 1277 ntBASIC21.15■□□□□ 0.98
ATL1Q8WXF7 AC024257.2-201ENST00000549699 147 ntBASIC21.15■□□□□ 0.98
ATL1Q8WXF7 MIR4767-201ENST00000582827 78 ntBASIC21.15■□□□□ 0.98
ATL1Q8WXF7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATL1Q8WXF7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATL1Q8WXF7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
ATL1Q8WXF7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.15■□□□□ 0.98
ATL1Q8WXF7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATL1Q8WXF7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATL1Q8WXF7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATL1Q8WXF7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATL1Q8WXF7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
ATL1Q8WXF7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.14■□□□□ 0.98
ATL1Q8WXF7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATL1Q8WXF7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATL1Q8WXF7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
ATL1Q8WXF7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.14■□□□□ 0.97
ATL1Q8WXF7 BX842568.3-201ENST00000418104 571 ntBASIC21.14■□□□□ 0.97
ATL1Q8WXF7 AC096631.2-201ENST00000436136 790 ntBASIC21.14■□□□□ 0.97
ATL1Q8WXF7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms