Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 GMNN-202ENST00000356509 1133 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
MTHFRP42898 PRDX1-203ENST00000372079 609 ntTSL 3 BASIC13.15□□□□□ -0.3
MTHFRP42898 MRPL23-203ENST00000397294 551 ntTSL 4 BASIC13.15□□□□□ -0.3
MTHFRP42898 AC005102.1-201ENST00000403118 479 ntBASIC13.15□□□□□ -0.3
MTHFRP42898 TMEM176A-201ENST00000004103 1261 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
MTHFRP42898 AC003101.1-201ENST00000412403 459 ntTSL 3 BASIC13.15□□□□□ -0.3
MTHFRP42898 SGCZ-202ENST00000421524 867 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MTHFRP42898 AC003958.1-201ENST00000435883 421 ntBASIC13.15□□□□□ -0.3
MTHFRP42898 LINC00271-202ENST00000436554 655 ntTSL 5 BASIC13.15□□□□□ -0.3
MTHFRP42898 MAP1LC3BP1-202ENST00000438342 516 ntTSL 3 BASIC13.15□□□□□ -0.3
MTHFRP42898 AL365203.1-201ENST00000450890 1048 ntTSL 3 BASIC13.15□□□□□ -0.3
MTHFRP42898 XIAP-AS1-201ENST00000458331 482 ntTSL 3 BASIC13.15□□□□□ -0.3
MTHFRP42898 AC245884.7-201ENST00000514037 356 ntBASIC13.15□□□□□ -0.3
MTHFRP42898 RNF139-AS1-202ENST00000519861 359 ntTSL 3 BASIC13.15□□□□□ -0.3
MTHFRP42898 PTDSS1-206ENST00000522072 1112 ntTSL 2 BASIC13.15□□□□□ -0.3
MTHFRP42898 IGLVI-63-201ENST00000524184 384 ntBASIC13.15□□□□□ -0.3
MTHFRP42898 AL118557.1-201ENST00000554408 440 ntBASIC13.15□□□□□ -0.3
MTHFRP42898 Metazoa_SRP.59-201ENST00000621376 277 ntBASIC13.15□□□□□ -0.3
MTHFRP42898 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC13.15□□□□□ -0.3
MTHFRP42898 ACTG1-216ENST00000615544 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MTHFRP42898 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MTHFRP42898 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MTHFRP42898 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MTHFRP42898 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MTHFRP42898 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC13.15□□□□□ -0.3
MTHFRP42898 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
MTHFRP42898 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MTHFRP42898 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
MTHFRP42898 AC011481.3-201ENST00000623895 5594 ntBASIC13.15□□□□□ -0.3
MTHFRP42898 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MTHFRP42898 PNLIPRP2-201ENST00000579578 1482 ntAPPRIS P5 TSL 2 BASIC13.15□□□□□ -0.3
MTHFRP42898 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MTHFRP42898 NAP1L1-206ENST00000544816 1597 ntTSL 2 BASIC13.15□□□□□ -0.3
MTHFRP42898 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MTHFRP42898 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
MTHFRP42898 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
MTHFRP42898 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.31
MTHFRP42898 KLF6-206ENST00000497571 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
MTHFRP42898 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
MTHFRP42898 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
MTHFRP42898 CREB5-204ENST00000396300 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
MTHFRP42898 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC13.14□□□□□ -0.31
MTHFRP42898 TMEM136-201ENST00000314475 1434 ntTSL 2 BASIC13.14□□□□□ -0.31
MTHFRP42898 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC13.14□□□□□ -0.31
MTHFRP42898 AC078850.1-201ENST00000514265 1623 ntTSL 2 BASIC13.14□□□□□ -0.31
MTHFRP42898 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MTHFRP42898 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MTHFRP42898 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MTHFRP42898 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MTHFRP42898 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC13.14□□□□□ -0.31
MTHFRP42898 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MTHFRP42898 AL590683.1-201ENST00000439059 1849 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MTHFRP42898 SMIM21-201ENST00000382638 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
MTHFRP42898 KRTAP12-4-201ENST00000391618 447 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
MTHFRP42898 MED20-204ENST00000409312 932 ntTSL 2 BASIC13.14□□□□□ -0.31
MTHFRP42898 AGAP13P-201ENST00000417888 363 ntBASIC13.14□□□□□ -0.31
MTHFRP42898 IGHV3-74-201ENST00000424969 587 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
MTHFRP42898 RPSAP19-201ENST00000431241 880 ntBASIC13.14□□□□□ -0.31
MTHFRP42898 AC131097.4-201ENST00000442867 571 ntTSL 4 BASIC13.14□□□□□ -0.31
MTHFRP42898 AL390726.1-201ENST00000451357 202 ntBASIC13.14□□□□□ -0.31
MTHFRP42898 LINC01287-203ENST00000454441 1007 ntTSL 5 BASIC13.14□□□□□ -0.31
MTHFRP42898 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
MTHFRP42898 AC011005.1-201ENST00000467614 1263 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
MTHFRP42898 RN7SL229P-201ENST00000495651 299 ntBASIC13.14□□□□□ -0.31
MTHFRP42898 RN7SL833P-201ENST00000498758 284 ntBASIC13.14□□□□□ -0.31
MTHFRP42898 SDHD-204ENST00000528021 1071 ntTSL 3 BASIC13.14□□□□□ -0.31
MTHFRP42898 SDHD-205ENST00000528048 905 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MTHFRP42898 ZBTB25-203ENST00000555424 565 ntTSL 5 BASIC13.14□□□□□ -0.31
MTHFRP42898 ENO1P2-201ENST00000557166 974 ntBASIC13.14□□□□□ -0.31
MTHFRP42898 HNRNPA1P62-201ENST00000559372 952 ntBASIC13.14□□□□□ -0.31
MTHFRP42898 AC137932.2-201ENST00000562995 1205 ntTSL 2 BASIC13.14□□□□□ -0.31
MTHFRP42898 AP001505.1-201ENST00000569966 824 ntBASIC13.14□□□□□ -0.31
MTHFRP42898 MYL4-208ENST00000572316 850 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
MTHFRP42898 SMIM17-202ENST00000600547 573 ntTSL 4 BASIC13.14□□□□□ -0.31
MTHFRP42898 Metazoa_SRP.198-201ENST00000610617 323 ntBASIC13.14□□□□□ -0.31
MTHFRP42898 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
MTHFRP42898 PCDHB17P-202ENST00000623466 3066 ntBASIC13.14□□□□□ -0.31
MTHFRP42898 MSRA-202ENST00000382490 1460 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MTHFRP42898 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
MTHFRP42898 MIR22HG-208ENST00000574306 2626 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MTHFRP42898 PAX6-249ENST00000639034 1597 ntTSL 5 BASIC13.14□□□□□ -0.31
MTHFRP42898 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
MTHFRP42898 CLK4-208ENST00000520957 1690 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MTHFRP42898 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
MTHFRP42898 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MTHFRP42898 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC13.14□□□□□ -0.31
MTHFRP42898 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
MTHFRP42898 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
MTHFRP42898 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MTHFRP42898 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MTHFRP42898 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC13.14□□□□□ -0.31
MTHFRP42898 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MTHFRP42898 FPGT-202ENST00000370898 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MTHFRP42898 HTR3E-206ENST00000440596 1449 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MTHFRP42898 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MTHFRP42898 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MTHFRP42898 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC13.13□□□□□ -0.31
MTHFRP42898 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
MTHFRP42898 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
MTHFRP42898 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms