RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 NISCHQ9Y2I1 1504 aa27.66■■■□□ 2.02
PCDHB17P-202ENST00000623466 SHROOM4Q9ULL8 1493 aa23.97■■□□□ 1.43
PCDHB17P-202ENST00000623466 CCDC180Q9P1Z9 1646 aa23.83■■□□□ 1.41
PCDHB17P-202ENST00000623466 DCAF8L2P0C7V8 631 aa23.77■■□□□ 1.4
PCDHB17P-202ENST00000623466 SUPT5HO00267 1087 aaKnown RBP23.4■■□□□ 1.34
PCDHB17P-202ENST00000623466 ZCCHC6Q5VYS8 1495 aaKnown RBP23.33■■□□□ 1.33
PCDHB17P-202ENST00000623466 ABCC9O60706 1549 aa22.87■■□□□ 1.25
PCDHB17P-202ENST00000623466 DCAF1Q9Y4B6 1507 aa22.79■■□□□ 1.24
PCDHB17P-202ENST00000623466 CHIC1Q5VXU3 224 aa22.37■■□□□ 1.17
PCDHB17P-202ENST00000623466 MYO15BQ96JP2 1530 aa22.29■■□□□ 1.16
PCDHB17P-202ENST00000623466 NACADO15069 1562 aa22.28■■□□□ 1.16
PCDHB17P-202ENST00000623466 SCRIBQ14160 1630 aa22.27■■□□□ 1.16
PCDHB17P-202ENST00000623466 RB1CC1Q8TDY2 1594 aa22.18■■□□□ 1.14
PCDHB17P-202ENST00000623466 HRCP23327 699 aa22.15■■□□□ 1.14
PCDHB17P-202ENST00000623466 PCGF6Q9BYE7 350 aa22.06■■□□□ 1.12
PCDHB17P-202ENST00000623466 PELP1Q8IZL8 1130 aaKnown RBP21.99■■□□□ 1.11
PCDHB17P-202ENST00000623466 LOC105371045A0A1W2PR82 267 aa21.94■■□□□ 1.1
PCDHB17P-202ENST00000623466 RSF1Q96T23 1441 aaPredicted RBP21.91■■□□□ 1.1
PCDHB17P-202ENST00000623466 PPARGC1BQ86YN6 1023 aaKnown RBP21.89■■□□□ 1.09
PCDHB17P-202ENST00000623466 CECR2Q9BXF3 1484 aa21.84■■□□□ 1.09
PCDHB17P-202ENST00000623466 EHMT2Q96KQ7 1210 aa21.78■■□□□ 1.08
PCDHB17P-202ENST00000623466 FAM9AQ8IZU1 332 aaPredicted RBP21.73■■□□□ 1.07
PCDHB17P-202ENST00000623466 PABPN1Q86U42 306 aaKnown RBP eCLIP21.67■■□□□ 1.06
PCDHB17P-202ENST00000623466 UNC13AQ9UPW8 1703 aa21.66■■□□□ 1.06
PCDHB17P-202ENST00000623466 TRIM41Q8WV44 630 aa21.64■■□□□ 1.05
PCDHB17P-202ENST00000623466 MROH2BQ7Z745 1585 aa21.62■■□□□ 1.05
PCDHB17P-202ENST00000623466 BICRAQ9NZM4 1560 aa21.49■■□□□ 1.03
PCDHB17P-202ENST00000623466 WIZO95785 1651 aa21.46■■□□□ 1.03
PCDHB17P-202ENST00000623466 TRIM26Q12899 539 aaPredicted RBP21.33■■□□□ 1.01
PCDHB17P-202ENST00000623466 MYT1Q01538 1121 aa21.32■■□□□ 1
PCDHB17P-202ENST00000623466 BAZ1AQ9NRL2 1556 aaPredicted RBP21.23■□□□□ 0.99
PCDHB17P-202ENST00000623466 SMARCA4P51532 1647 aa21.15■□□□□ 0.98
PCDHB17P-202ENST00000623466 CCDC88BA6NC98 1476 aa21.06■□□□□ 0.96
PCDHB17P-202ENST00000623466 EIF4G1Q04637 1599 aaKnown RBP21.04■□□□□ 0.96
PCDHB17P-202ENST00000623466 SCAF1Q9H7N4 1312 aaKnown RBP21.03■□□□□ 0.96
PCDHB17P-202ENST00000623466 TOP2AP11388 1531 aaKnown RBP21.01■□□□□ 0.95
PCDHB17P-202ENST00000623466 ABCC8Q09428 1581 aa21■□□□□ 0.95
PCDHB17P-202ENST00000623466 TTBK1Q5TCY1 1321 aaPredicted RBP20.92■□□□□ 0.94
PCDHB17P-202ENST00000623466 ZEB1P37275 1124 aaPredicted RBP20.91■□□□□ 0.94
PCDHB17P-202ENST00000623466 SMARCA2P51531 1590 aa20.89■□□□□ 0.94
PCDHB17P-202ENST00000623466 PEG3Q9GZU2 1588 aa20.85■□□□□ 0.93
PCDHB17P-202ENST00000623466 SOGA1O94964 1423 aa20.81■□□□□ 0.92
PCDHB17P-202ENST00000623466 RUSC2Q8N2Y8 1516 aa20.75■□□□□ 0.91
PCDHB17P-202ENST00000623466 UBTFP17480 764 aaKnown RBP20.74■□□□□ 0.91
PCDHB17P-202ENST00000623466 ATAD2BQ9ULI0 1458 aa20.72■□□□□ 0.91
PCDHB17P-202ENST00000623466 RANGAP1P46060 587 aaPredicted RBP20.71■□□□□ 0.91
PCDHB17P-202ENST00000623466 CC2D2AQ9P2K1 1620 aa20.67■□□□□ 0.9
PCDHB17P-202ENST00000623466 BAZ1BQ9UIG0 1483 aaKnown RBP20.67■□□□□ 0.9
PCDHB17P-202ENST00000623466 CSRNP3Q8WYN3 585 aa20.66■□□□□ 0.9
PCDHB17P-202ENST00000623466 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.62■□□□□ 0.89
PCDHB17P-202ENST00000623466 WRNQ14191 1432 aaPredicted RBP eCLIP20.6■□□□□ 0.89
PCDHB17P-202ENST00000623466 NCAPD3P42695 1498 aa20.56■□□□□ 0.88
PCDHB17P-202ENST00000623466 CCER1Q8TC90 406 aaPredicted RBP20.51■□□□□ 0.87
PCDHB17P-202ENST00000623466 HMGXB3Q12766 1538 aa20.5■□□□□ 0.87
PCDHB17P-202ENST00000623466 DNAJC5BQ9UF47 199 aa20.48■□□□□ 0.87
PCDHB17P-202ENST00000623466 CEP162Q5TB80 1403 aa20.46■□□□□ 0.87
PCDHB17P-202ENST00000623466 SYNJ1O43426 1573 aa20.44■□□□□ 0.86
PCDHB17P-202ENST00000623466 NEUROD1Q13562 356 aa20.38■□□□□ 0.85
PCDHB17P-202ENST00000623466 TNIKQ9UKE5 1360 aa20.37■□□□□ 0.85
PCDHB17P-202ENST00000623466 ACIN1Q9UKV3 1341 aaKnown RBP20.34■□□□□ 0.85
PCDHB17P-202ENST00000623466 DIEXFQ68CQ4 756 aaKnown RBP20.29■□□□□ 0.84
PCDHB17P-202ENST00000623466 EEA1Q15075 1411 aa20.27■□□□□ 0.84
PCDHB17P-202ENST00000623466 GOLGA3Q08378 1498 aa20.27■□□□□ 0.84
PCDHB17P-202ENST00000623466 RAPGEF2Q9Y4G8 1499 aa20.24■□□□□ 0.83
PCDHB17P-202ENST00000623466 GTF3C3Q9Y5Q9 886 aa20.23■□□□□ 0.83
PCDHB17P-202ENST00000623466 HNRNPUL2Q1KMD3 747 aaKnown RBP20.18■□□□□ 0.82
PCDHB17P-202ENST00000623466 CEP164Q9UPV0 1460 aa20.17■□□□□ 0.82
PCDHB17P-202ENST00000623466 CLIP1P30622 1438 aa20.16■□□□□ 0.82
PCDHB17P-202ENST00000623466 BIVM-ERCC5R4GMW8 1640 aa20.14■□□□□ 0.82
PCDHB17P-202ENST00000623466 TOP2BQ02880 1626 aa20.14■□□□□ 0.81
PCDHB17P-202ENST00000623466 CENPBP07199 599 aaPredicted RBP20.12■□□□□ 0.81
PCDHB17P-202ENST00000623466 APLP2Q06481 763 aa20.1■□□□□ 0.81
PCDHB17P-202ENST00000623466 CUX1P39880 1505 aa20.1■□□□□ 0.81
PCDHB17P-202ENST00000623466 PRDM2Q13029 1718 aa20.1■□□□□ 0.81
PCDHB17P-202ENST00000623466 KIF21BO75037 1637 aa20.07■□□□□ 0.8
PCDHB17P-202ENST00000623466 CFTRP13569 1480 aa20.07■□□□□ 0.8
PCDHB17P-202ENST00000623466 YTHDC1Q96MU7 727 aaKnown RBP20.04■□□□□ 0.8
PCDHB17P-202ENST00000623466 BCL11AQ9H165 835 aa20.03■□□□□ 0.8
PCDHB17P-202ENST00000623466 CADPSQ9ULU8 1353 aa20.02■□□□□ 0.79
PCDHB17P-202ENST00000623466 ZNF316A6NFI3 1004 aaPredicted RBP19.96■□□□□ 0.79
PCDHB17P-202ENST00000623466 KIF27Q86VH2 1401 aa19.96■□□□□ 0.79
PCDHB17P-202ENST00000623466 NESP48681 1621 aa19.95■□□□□ 0.78
PCDHB17P-202ENST00000623466 KANK4Q5T7N3 995 aaPredicted RBP19.95■□□□□ 0.78
PCDHB17P-202ENST00000623466 P3H3Q8IVL6 736 aa19.94■□□□□ 0.78
PCDHB17P-202ENST00000623466 VPS8Q8N3P4 1428 aa19.93■□□□□ 0.78
PCDHB17P-202ENST00000623466 LAMC3Q9Y6N6 1575 aa19.93■□□□□ 0.78
PCDHB17P-202ENST00000623466 CUX2O14529 1486 aa19.92■□□□□ 0.78
PCDHB17P-202ENST00000623466 PRXQ9BXM0 1461 aa19.91■□□□□ 0.78
PCDHB17P-202ENST00000623466 ATP1B4Q9UN42 357 aaPredicted RBP19.88■□□□□ 0.77
PCDHB17P-202ENST00000623466 ITGAEP38570 1179 aa19.86■□□□□ 0.77
PCDHB17P-202ENST00000623466 IGF1RP08069 1367 aa19.86■□□□□ 0.77
PCDHB17P-202ENST00000623466 MIER1Q8N108 512 aa19.85■□□□□ 0.77
PCDHB17P-202ENST00000623466 FGD5Q6ZNL6 1462 aa19.83■□□□□ 0.77
PCDHB17P-202ENST00000623466 ARAP1Q96P48 1450 aa19.81■□□□□ 0.76
PCDHB17P-202ENST00000623466 FANCD2Q9BXW9 1451 aa19.81■□□□□ 0.76
PCDHB17P-202ENST00000623466 RAD54L2Q9Y4B4 1467 aa19.81■□□□□ 0.76
PCDHB17P-202ENST00000623466 PDS5BQ9NTI5 1447 aa19.8■□□□□ 0.76
PCDHB17P-202ENST00000623466 ERICH3Q5RHP9 1530 aa19.8■□□□□ 0.76
PCDHB17P-202ENST00000623466 CARMIL1Q5VZK9 1371 aa19.79■□□□□ 0.76
PCDHB17P-202ENST00000623466 PRKCSHP14314 528 aaPredicted RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms