RNA–Protein interactions for RNA: ENST00000382638.3

SMIM21-201, Transcript of small integral membrane protein 21, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMIM21, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM21-201ENST00000382638 NISCHQ9Y2I1 1504 aa29.6■■■□□ 2.33
SMIM21-201ENST00000382638 CCDC180Q9P1Z9 1646 aa26.32■■□□□ 1.8
SMIM21-201ENST00000382638 ABCC9O60706 1549 aa25.79■■□□□ 1.72
SMIM21-201ENST00000382638 RB1CC1Q8TDY2 1594 aa24.81■■□□□ 1.56
SMIM21-201ENST00000382638 NACADO15069 1562 aa24.8■■□□□ 1.56
SMIM21-201ENST00000382638 DCAF8L2P0C7V8 631 aa24.7■■□□□ 1.54
SMIM21-201ENST00000382638 MYO15BQ96JP2 1530 aa24.67■■□□□ 1.54
SMIM21-201ENST00000382638 ZCCHC6Q5VYS8 1495 aaKnown RBP24.63■■□□□ 1.53
SMIM21-201ENST00000382638 DCAF1Q9Y4B6 1507 aa24.52■■□□□ 1.52
SMIM21-201ENST00000382638 UNC13AQ9UPW8 1703 aa24.19■■□□□ 1.46
SMIM21-201ENST00000382638 PABPN1Q86U42 306 aaKnown RBP eCLIP24.11■■□□□ 1.45
SMIM21-201ENST00000382638 BICRAQ9NZM4 1560 aa24.07■■□□□ 1.44
SMIM21-201ENST00000382638 SCRIBQ14160 1630 aa23.95■■□□□ 1.43
SMIM21-201ENST00000382638 SHROOM4Q9ULL8 1493 aa23.86■■□□□ 1.41
SMIM21-201ENST00000382638 DNAJC5BQ9UF47 199 aa23.81■■□□□ 1.4
SMIM21-201ENST00000382638 EIF4G1Q04637 1599 aaKnown RBP23.43■■□□□ 1.34
SMIM21-201ENST00000382638 CC2D2AQ9P2K1 1620 aa23.34■■□□□ 1.33
SMIM21-201ENST00000382638 CECR2Q9BXF3 1484 aa23.22■■□□□ 1.31
SMIM21-201ENST00000382638 SMARCA4P51532 1647 aa22.95■■□□□ 1.26
SMIM21-201ENST00000382638 BAZ1AQ9NRL2 1556 aaPredicted RBP22.93■■□□□ 1.26
SMIM21-201ENST00000382638 NCAPD3P42695 1498 aa22.91■■□□□ 1.26
SMIM21-201ENST00000382638 ATAD2BQ9ULI0 1458 aa22.88■■□□□ 1.25
SMIM21-201ENST00000382638 SMARCA2P51531 1590 aa22.84■■□□□ 1.25
SMIM21-201ENST00000382638 MROH2BQ7Z745 1585 aa22.78■■□□□ 1.24
SMIM21-201ENST00000382638 PEG3Q9GZU2 1588 aa22.77■■□□□ 1.24
SMIM21-201ENST00000382638 HMGXB3Q12766 1538 aa22.75■■□□□ 1.23
SMIM21-201ENST00000382638 BAZ1BQ9UIG0 1483 aaKnown RBP22.66■■□□□ 1.22
SMIM21-201ENST00000382638 AEBP2Q6ZN18 517 aaPredicted RBP22.63■■□□□ 1.21
SMIM21-201ENST00000382638 RSF1Q96T23 1441 aaPredicted RBP22.52■■□□□ 1.2
SMIM21-201ENST00000382638 WIZO95785 1651 aa22.5■■□□□ 1.19
SMIM21-201ENST00000382638 NESP48681 1621 aa22.31■■□□□ 1.16
SMIM21-201ENST00000382638 TOP2AP11388 1531 aaKnown RBP22.29■■□□□ 1.16
SMIM21-201ENST00000382638 LAMC3Q9Y6N6 1575 aa22.27■■□□□ 1.16
SMIM21-201ENST00000382638 ERCC6Q03468 1493 aa22.24■■□□□ 1.15
SMIM21-201ENST00000382638 CADPSQ9ULU8 1353 aa22.23■■□□□ 1.15
SMIM21-201ENST00000382638 PDS5BQ9NTI5 1447 aa22.15■■□□□ 1.14
SMIM21-201ENST00000382638 CUX2O14529 1486 aa22.09■■□□□ 1.13
SMIM21-201ENST00000382638 CFTRP13569 1480 aa22.07■■□□□ 1.12
SMIM21-201ENST00000382638 CCDC88BA6NC98 1476 aa22.05■■□□□ 1.12
SMIM21-201ENST00000382638 KIF21AQ7Z4S6 1674 aa22.01■■□□□ 1.11
SMIM21-201ENST00000382638 THOC2Q8NI27 1593 aaKnown RBP21.99■■□□□ 1.11
SMIM21-201ENST00000382638 FANCD2Q9BXW9 1451 aa21.93■■□□□ 1.1
SMIM21-201ENST00000382638 MRC2Q9UBG0 1479 aa21.9■■□□□ 1.1
SMIM21-201ENST00000382638 CEP164Q9UPV0 1460 aa21.9■■□□□ 1.1
SMIM21-201ENST00000382638 SUPT5HO00267 1087 aaKnown RBP21.84■■□□□ 1.09
SMIM21-201ENST00000382638 WDR62O43379 1518 aa21.83■■□□□ 1.09
SMIM21-201ENST00000382638 PRDM2Q13029 1718 aa21.81■■□□□ 1.08
SMIM21-201ENST00000382638 URB2Q14146 1524 aaKnown RBP21.71■■□□□ 1.07
SMIM21-201ENST00000382638 ABCC8Q09428 1581 aa21.61■■□□□ 1.05
SMIM21-201ENST00000382638 TOPBP1Q92547 1522 aa21.57■■□□□ 1.04
SMIM21-201ENST00000382638 DNMBPQ6XZF7 1577 aa21.53■■□□□ 1.04
SMIM21-201ENST00000382638 DNAJC5Q9H3Z4 198 aa21.53■■□□□ 1.04
SMIM21-201ENST00000382638 IFT140Q96RY7 1462 aa21.47■■□□□ 1.03
SMIM21-201ENST00000382638 POLA1P09884 1462 aaPredicted RBP21.39■■□□□ 1.01
SMIM21-201ENST00000382638 CUX1P39880 1505 aa21.38■■□□□ 1.01
SMIM21-201ENST00000382638 ZNF608Q9ULD9 1512 aaPredicted RBP21.35■■□□□ 1.01
SMIM21-201ENST00000382638 TARBP1Q13395 1621 aaKnown RBP21.34■■□□□ 1.01
SMIM21-201ENST00000382638 SOGA1O94964 1423 aa21.31■■□□□ 1
SMIM21-201ENST00000382638 FGD5Q6ZNL6 1462 aa21.31■■□□□ 1
SMIM21-201ENST00000382638 RAD54L2Q9Y4B4 1467 aa21.28■■□□□ 1
SMIM21-201ENST00000382638 AQRO60306 1485 aaKnown RBP eCLIP21.24■□□□□ 0.99
SMIM21-201ENST00000382638 EIF4G3O43432 1585 aaKnown RBP21.23■□□□□ 0.99
SMIM21-201ENST00000382638 WRNQ14191 1432 aaPredicted RBP eCLIP21.21■□□□□ 0.99
SMIM21-201ENST00000382638 WDR97A6NE52 1622 aa21.19■□□□□ 0.98
SMIM21-201ENST00000382638 TDRD9Q8NDG6 1382 aaKnown RBP21.18■□□□□ 0.98
SMIM21-201ENST00000382638 TOP2BQ02880 1626 aa21.18■□□□□ 0.98
SMIM21-201ENST00000382638 OSCARQ8IYS5 282 aa21.17■□□□□ 0.98
SMIM21-201ENST00000382638 BIVM-ERCC5R4GMW8 1640 aa21.15■□□□□ 0.98
SMIM21-201ENST00000382638 SYNJ1O43426 1573 aa21.14■□□□□ 0.97
SMIM21-201ENST00000382638 ABCA10Q8WWZ4 1543 aa21.14■□□□□ 0.97
SMIM21-201ENST00000382638 CHIC1Q5VXU3 224 aa21.12■□□□□ 0.97
SMIM21-201ENST00000382638 GRIN2BQ13224 1484 aa21.07■□□□□ 0.96
SMIM21-201ENST00000382638 GAPVD1Q14C86 1478 aa21.06■□□□□ 0.96
SMIM21-201ENST00000382638 SNAPC4Q5SXM2 1469 aa21.02■□□□□ 0.96
SMIM21-201ENST00000382638 MAGI1Q96QZ7 1491 aaPredicted RBP21.02■□□□□ 0.96
SMIM21-201ENST00000382638 ABCA5Q8WWZ7 1642 aa21.02■□□□□ 0.96
SMIM21-201ENST00000382638 FBLN2P98095 1184 aa20.97■□□□□ 0.95
SMIM21-201ENST00000382638 CHD1O14646 1710 aa20.96■□□□□ 0.95
SMIM21-201ENST00000382638 PBRM1Q86U86 1689 aa20.95■□□□□ 0.94
SMIM21-201ENST00000382638 CHMP7Q8WUX9 453 aaPredicted RBP20.94■□□□□ 0.94
SMIM21-201ENST00000382638 SYNJ2O15056 1496 aa20.94■□□□□ 0.94
SMIM21-201ENST00000382638 ERICH3Q5RHP9 1530 aa20.87■□□□□ 0.93
SMIM21-201ENST00000382638 ADAMTS12P58397 1594 aa20.82■□□□□ 0.92
SMIM21-201ENST00000382638 FHAD1B1AJZ9 1412 aa20.82■□□□□ 0.92
SMIM21-201ENST00000382638 CLASP1Q7Z460 1538 aa20.8■□□□□ 0.92
SMIM21-201ENST00000382638 KIF27Q86VH2 1401 aa20.79■□□□□ 0.92
SMIM21-201ENST00000382638 ARHGEF11O15085 1522 aa20.78■□□□□ 0.92
SMIM21-201ENST00000382638 GRIN2AQ12879 1464 aa20.78■□□□□ 0.92
SMIM21-201ENST00000382638 RIMBP3CA6NJZ7 1639 aa20.78■□□□□ 0.92
SMIM21-201ENST00000382638 RIMBP3BA6NNM3 1639 aa20.78■□□□□ 0.92
SMIM21-201ENST00000382638 RIMBP3Q9UFD9 1639 aa20.78■□□□□ 0.92
SMIM21-201ENST00000382638 IGF1RP08069 1367 aa20.75■□□□□ 0.91
SMIM21-201ENST00000382638 NUP160Q12769 1436 aa20.72■□□□□ 0.91
SMIM21-201ENST00000382638 TRIM41Q8WV44 630 aa20.7■□□□□ 0.9
SMIM21-201ENST00000382638 CEP170Q5SW79 1584 aa20.66■□□□□ 0.9
SMIM21-201ENST00000382638 CUL7Q14999 1698 aa20.64■□□□□ 0.89
SMIM21-201ENST00000382638 ARAP1Q96P48 1450 aa20.62■□□□□ 0.89
SMIM21-201ENST00000382638 CYB5RLQ6IPT4 315 aa20.61■□□□□ 0.89
SMIM21-201ENST00000382638 CARMIL1Q5VZK9 1371 aa20.6■□□□□ 0.89
SMIM21-201ENST00000382638 RUSC2Q8N2Y8 1516 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms