RNA–Protein interactions for RNA: ENST00000600547.1

SMIM17-202, Transcript of small integral membrane protein 17, humanhuman

TSL 4 BASIC

Gene SMIM17, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17-202ENST00000600547 NISCHQ9Y2I1 1504 aa29.21■■■□□ 2.27
SMIM17-202ENST00000600547 CCDC180Q9P1Z9 1646 aa26.11■■□□□ 1.77
SMIM17-202ENST00000600547 ABCC9O60706 1549 aa25.51■■□□□ 1.67
SMIM17-202ENST00000600547 DCAF8L2P0C7V8 631 aa24.61■■□□□ 1.53
SMIM17-202ENST00000600547 RB1CC1Q8TDY2 1594 aa24.59■■□□□ 1.53
SMIM17-202ENST00000600547 NACADO15069 1562 aa24.5■■□□□ 1.51
SMIM17-202ENST00000600547 ZCCHC6Q5VYS8 1495 aaKnown RBP24.31■■□□□ 1.48
SMIM17-202ENST00000600547 MYO15BQ96JP2 1530 aa24.24■■□□□ 1.47
SMIM17-202ENST00000600547 DCAF1Q9Y4B6 1507 aa24.15■■□□□ 1.46
SMIM17-202ENST00000600547 UNC13AQ9UPW8 1703 aa24.07■■□□□ 1.44
SMIM17-202ENST00000600547 SCRIBQ14160 1630 aa23.82■■□□□ 1.4
SMIM17-202ENST00000600547 PABPN1Q86U42 306 aaKnown RBP eCLIP23.8■■□□□ 1.4
SMIM17-202ENST00000600547 BICRAQ9NZM4 1560 aa23.69■■□□□ 1.38
SMIM17-202ENST00000600547 SHROOM4Q9ULL8 1493 aa23.49■■□□□ 1.35
SMIM17-202ENST00000600547 DNAJC5BQ9UF47 199 aa23.25■■□□□ 1.31
SMIM17-202ENST00000600547 EIF4G1Q04637 1599 aaKnown RBP23.14■■□□□ 1.3
SMIM17-202ENST00000600547 CC2D2AQ9P2K1 1620 aa23.09■■□□□ 1.29
SMIM17-202ENST00000600547 CECR2Q9BXF3 1484 aa22.91■■□□□ 1.26
SMIM17-202ENST00000600547 SMARCA4P51532 1647 aa22.74■■□□□ 1.23
SMIM17-202ENST00000600547 BAZ1AQ9NRL2 1556 aaPredicted RBP22.72■■□□□ 1.23
SMIM17-202ENST00000600547 SMARCA2P51531 1590 aa22.61■■□□□ 1.21
SMIM17-202ENST00000600547 ATAD2BQ9ULI0 1458 aa22.54■■□□□ 1.2
SMIM17-202ENST00000600547 NCAPD3P42695 1498 aa22.51■■□□□ 1.19
SMIM17-202ENST00000600547 MROH2BQ7Z745 1585 aa22.5■■□□□ 1.19
SMIM17-202ENST00000600547 HMGXB3Q12766 1538 aa22.47■■□□□ 1.19
SMIM17-202ENST00000600547 BAZ1BQ9UIG0 1483 aaKnown RBP22.45■■□□□ 1.18
SMIM17-202ENST00000600547 PEG3Q9GZU2 1588 aa22.42■■□□□ 1.18
SMIM17-202ENST00000600547 WIZO95785 1651 aa22.36■■□□□ 1.17
SMIM17-202ENST00000600547 RSF1Q96T23 1441 aaPredicted RBP22.2■■□□□ 1.14
SMIM17-202ENST00000600547 TOP2AP11388 1531 aaKnown RBP22.08■■□□□ 1.13
SMIM17-202ENST00000600547 ERCC6Q03468 1493 aa22.08■■□□□ 1.12
SMIM17-202ENST00000600547 LAMC3Q9Y6N6 1575 aa22.04■■□□□ 1.12
SMIM17-202ENST00000600547 NESP48681 1621 aa22.02■■□□□ 1.11
SMIM17-202ENST00000600547 KIF21AQ7Z4S6 1674 aa21.89■■□□□ 1.1
SMIM17-202ENST00000600547 PDS5BQ9NTI5 1447 aa21.89■■□□□ 1.09
SMIM17-202ENST00000600547 CADPSQ9ULU8 1353 aa21.88■■□□□ 1.09
SMIM17-202ENST00000600547 PRDM2Q13029 1718 aa21.82■■□□□ 1.08
SMIM17-202ENST00000600547 SUPT5HO00267 1087 aaKnown RBP21.8■■□□□ 1.08
SMIM17-202ENST00000600547 CCDC88BA6NC98 1476 aa21.77■■□□□ 1.08
SMIM17-202ENST00000600547 CUX2O14529 1486 aa21.77■■□□□ 1.07
SMIM17-202ENST00000600547 CFTRP13569 1480 aa21.73■■□□□ 1.07
SMIM17-202ENST00000600547 THOC2Q8NI27 1593 aaKnown RBP21.72■■□□□ 1.07
SMIM17-202ENST00000600547 CEP164Q9UPV0 1460 aa21.7■■□□□ 1.06
SMIM17-202ENST00000600547 FANCD2Q9BXW9 1451 aa21.68■■□□□ 1.06
SMIM17-202ENST00000600547 MRC2Q9UBG0 1479 aa21.64■■□□□ 1.05
SMIM17-202ENST00000600547 WDR62O43379 1518 aa21.54■■□□□ 1.04
SMIM17-202ENST00000600547 URB2Q14146 1524 aaKnown RBP21.41■■□□□ 1.02
SMIM17-202ENST00000600547 ABCC8Q09428 1581 aa21.39■■□□□ 1.01
SMIM17-202ENST00000600547 DNMBPQ6XZF7 1577 aa21.34■■□□□ 1.01
SMIM17-202ENST00000600547 TOPBP1Q92547 1522 aa21.32■■□□□ 1
SMIM17-202ENST00000600547 IFT140Q96RY7 1462 aa21.21■□□□□ 0.99
SMIM17-202ENST00000600547 CUX1P39880 1505 aa21.12■□□□□ 0.97
SMIM17-202ENST00000600547 POLA1P09884 1462 aaPredicted RBP21.11■□□□□ 0.97
SMIM17-202ENST00000600547 FGD5Q6ZNL6 1462 aa21.1■□□□□ 0.97
SMIM17-202ENST00000600547 TARBP1Q13395 1621 aaKnown RBP21.07■□□□□ 0.96
SMIM17-202ENST00000600547 EIF4G3O43432 1585 aaKnown RBP21.07■□□□□ 0.96
SMIM17-202ENST00000600547 SOGA1O94964 1423 aa21.07■□□□□ 0.96
SMIM17-202ENST00000600547 ZNF608Q9ULD9 1512 aaPredicted RBP21.05■□□□□ 0.96
SMIM17-202ENST00000600547 DNAJC5Q9H3Z4 198 aa21.05■□□□□ 0.96
SMIM17-202ENST00000600547 RAD54L2Q9Y4B4 1467 aa21.03■□□□□ 0.96
SMIM17-202ENST00000600547 WRNQ14191 1432 aaPredicted RBP eCLIP21.03■□□□□ 0.96
SMIM17-202ENST00000600547 BIVM-ERCC5R4GMW8 1640 aa21.02■□□□□ 0.96
SMIM17-202ENST00000600547 TOP2BQ02880 1626 aa21■□□□□ 0.95
SMIM17-202ENST00000600547 WDR97A6NE52 1622 aa20.99■□□□□ 0.95
SMIM17-202ENST00000600547 AQRO60306 1485 aaKnown RBP eCLIP20.96■□□□□ 0.95
SMIM17-202ENST00000600547 SYNJ1O43426 1573 aa20.96■□□□□ 0.95
SMIM17-202ENST00000600547 TDRD9Q8NDG6 1382 aaKnown RBP20.93■□□□□ 0.94
SMIM17-202ENST00000600547 PBRM1Q86U86 1689 aa20.92■□□□□ 0.94
SMIM17-202ENST00000600547 CHD1O14646 1710 aa20.9■□□□□ 0.94
SMIM17-202ENST00000600547 OSCARQ8IYS5 282 aa20.88■□□□□ 0.93
SMIM17-202ENST00000600547 FBLN2P98095 1184 aa20.86■□□□□ 0.93
SMIM17-202ENST00000600547 ABCA10Q8WWZ4 1543 aa20.86■□□□□ 0.93
SMIM17-202ENST00000600547 GRIN2BQ13224 1484 aa20.83■□□□□ 0.93
SMIM17-202ENST00000600547 GAPVD1Q14C86 1478 aa20.83■□□□□ 0.93
SMIM17-202ENST00000600547 ABCA5Q8WWZ7 1642 aa20.81■□□□□ 0.92
SMIM17-202ENST00000600547 SNAPC4Q5SXM2 1469 aa20.81■□□□□ 0.92
SMIM17-202ENST00000600547 MAGI1Q96QZ7 1491 aaPredicted RBP20.78■□□□□ 0.92
SMIM17-202ENST00000600547 CHMP7Q8WUX9 453 aaPredicted RBP20.76■□□□□ 0.91
SMIM17-202ENST00000600547 SYNJ2O15056 1496 aa20.69■□□□□ 0.9
SMIM17-202ENST00000600547 ERICH3Q5RHP9 1530 aa20.65■□□□□ 0.9
SMIM17-202ENST00000600547 ADAMTS12P58397 1594 aa20.63■□□□□ 0.89
SMIM17-202ENST00000600547 KIF27Q86VH2 1401 aa20.61■□□□□ 0.89
SMIM17-202ENST00000600547 TRIM41Q8WV44 630 aa20.6■□□□□ 0.89
SMIM17-202ENST00000600547 FHAD1B1AJZ9 1412 aa20.58■□□□□ 0.88
SMIM17-202ENST00000600547 RIMBP3CA6NJZ7 1639 aa20.56■□□□□ 0.88
SMIM17-202ENST00000600547 RIMBP3BA6NNM3 1639 aa20.56■□□□□ 0.88
SMIM17-202ENST00000600547 RIMBP3Q9UFD9 1639 aa20.56■□□□□ 0.88
SMIM17-202ENST00000600547 CUL7Q14999 1698 aa20.55■□□□□ 0.88
SMIM17-202ENST00000600547 GRIN2AQ12879 1464 aa20.55■□□□□ 0.88
SMIM17-202ENST00000600547 ARHGEF11O15085 1522 aa20.5■□□□□ 0.87
SMIM17-202ENST00000600547 CLASP1Q7Z460 1538 aa20.5■□□□□ 0.87
SMIM17-202ENST00000600547 CEP170Q5SW79 1584 aa20.45■□□□□ 0.86
SMIM17-202ENST00000600547 IGF1RP08069 1367 aa20.42■□□□□ 0.86
SMIM17-202ENST00000600547 NUP160Q12769 1436 aa20.39■□□□□ 0.85
SMIM17-202ENST00000600547 CARMIL1Q5VZK9 1371 aa20.38■□□□□ 0.85
SMIM17-202ENST00000600547 CYB5RLQ6IPT4 315 aa20.36■□□□□ 0.85
SMIM17-202ENST00000600547 RUSC2Q8N2Y8 1516 aa20.33■□□□□ 0.85
SMIM17-202ENST00000600547 SHROOM2Q13796 1616 aa20.31■□□□□ 0.84
SMIM17-202ENST00000600547 ARAP1Q96P48 1450 aa20.3■□□□□ 0.84
SMIM17-202ENST00000600547 RAPGEF2Q9Y4G8 1499 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms