RNA–Protein interactions for RNA: ENST00000436554.5

LINC00271-202, long intergenic non-protein coding RNA 271, humanhuman

TSL 5 BASIC

Gene LINC00271, Length 655 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-202ENST00000436554 NISCHQ9Y2I1 1504 aa29.29■■■□□ 2.28
LINC00271-202ENST00000436554 ABCC9O60706 1549 aa26.8■■□□□ 1.88
LINC00271-202ENST00000436554 CCDC180Q9P1Z9 1646 aa26.26■■□□□ 1.79
LINC00271-202ENST00000436554 DNAJC5BQ9UF47 199 aa25.58■■□□□ 1.69
LINC00271-202ENST00000436554 RB1CC1Q8TDY2 1594 aa25.26■■□□□ 1.63
LINC00271-202ENST00000436554 DCAF8L2P0C7V8 631 aa25.1■■□□□ 1.61
LINC00271-202ENST00000436554 PABPN1Q86U42 306 aaKnown RBP eCLIP25.02■■□□□ 1.6
LINC00271-202ENST00000436554 NACADO15069 1562 aa25.01■■□□□ 1.59
LINC00271-202ENST00000436554 UNC13AQ9UPW8 1703 aa24.59■■□□□ 1.53
LINC00271-202ENST00000436554 BICRAQ9NZM4 1560 aa24.55■■□□□ 1.52
LINC00271-202ENST00000436554 MYO15BQ96JP2 1530 aa24.54■■□□□ 1.52
LINC00271-202ENST00000436554 CECR2Q9BXF3 1484 aa24.16■■□□□ 1.46
LINC00271-202ENST00000436554 ZCCHC6Q5VYS8 1495 aaKnown RBP24.15■■□□□ 1.46
LINC00271-202ENST00000436554 CC2D2AQ9P2K1 1620 aa24.12■■□□□ 1.45
LINC00271-202ENST00000436554 SHROOM4Q9ULL8 1493 aa24.12■■□□□ 1.45
LINC00271-202ENST00000436554 DCAF1Q9Y4B6 1507 aa24.1■■□□□ 1.45
LINC00271-202ENST00000436554 SCRIBQ14160 1630 aa24.02■■□□□ 1.44
LINC00271-202ENST00000436554 EIF4G1Q04637 1599 aaKnown RBP23.98■■□□□ 1.43
LINC00271-202ENST00000436554 DNAJC5Q9H3Z4 198 aa23.7■■□□□ 1.38
LINC00271-202ENST00000436554 NCAPD3P42695 1498 aa23.17■■□□□ 1.3
LINC00271-202ENST00000436554 CUX2O14529 1486 aa23.17■■□□□ 1.3
LINC00271-202ENST00000436554 ERCC6Q03468 1493 aa23.14■■□□□ 1.29
LINC00271-202ENST00000436554 ATAD2BQ9ULI0 1458 aa23.05■■□□□ 1.28
LINC00271-202ENST00000436554 NESP48681 1621 aa22.93■■□□□ 1.26
LINC00271-202ENST00000436554 SMARCA2P51531 1590 aa22.9■■□□□ 1.26
LINC00271-202ENST00000436554 HMGXB3Q12766 1538 aa22.86■■□□□ 1.25
LINC00271-202ENST00000436554 SMARCA4P51532 1647 aa22.86■■□□□ 1.25
LINC00271-202ENST00000436554 BAZ1BQ9UIG0 1483 aaKnown RBP22.78■■□□□ 1.24
LINC00271-202ENST00000436554 BAZ1AQ9NRL2 1556 aaPredicted RBP22.71■■□□□ 1.23
LINC00271-202ENST00000436554 THOC2Q8NI27 1593 aaKnown RBP22.63■■□□□ 1.21
LINC00271-202ENST00000436554 PEG3Q9GZU2 1588 aa22.62■■□□□ 1.21
LINC00271-202ENST00000436554 LAMC3Q9Y6N6 1575 aa22.61■■□□□ 1.21
LINC00271-202ENST00000436554 PDS5BQ9NTI5 1447 aa22.59■■□□□ 1.21
LINC00271-202ENST00000436554 MROH2BQ7Z745 1585 aa22.58■■□□□ 1.2
LINC00271-202ENST00000436554 TRIM41Q8WV44 630 aa22.55■■□□□ 1.2
LINC00271-202ENST00000436554 CADPSQ9ULU8 1353 aa22.49■■□□□ 1.19
LINC00271-202ENST00000436554 KIF21AQ7Z4S6 1674 aa22.48■■□□□ 1.19
LINC00271-202ENST00000436554 MRC2Q9UBG0 1479 aa22.37■■□□□ 1.17
LINC00271-202ENST00000436554 WDR62O43379 1518 aa22.28■■□□□ 1.16
LINC00271-202ENST00000436554 WIZO95785 1651 aa22.25■■□□□ 1.15
LINC00271-202ENST00000436554 OSCARQ8IYS5 282 aa22.22■■□□□ 1.15
LINC00271-202ENST00000436554 CEP164Q9UPV0 1460 aa22.21■■□□□ 1.15
LINC00271-202ENST00000436554 FANCD2Q9BXW9 1451 aa22.19■■□□□ 1.14
LINC00271-202ENST00000436554 CFTRP13569 1480 aa22.11■■□□□ 1.13
LINC00271-202ENST00000436554 RSF1Q96T23 1441 aaPredicted RBP22.03■■□□□ 1.12
LINC00271-202ENST00000436554 URB2Q14146 1524 aaKnown RBP22.01■■□□□ 1.11
LINC00271-202ENST00000436554 AEBP2Q6ZN18 517 aaPredicted RBP22.01■■□□□ 1.11
LINC00271-202ENST00000436554 TOP2AP11388 1531 aaKnown RBP21.92■■□□□ 1.1
LINC00271-202ENST00000436554 ZNF608Q9ULD9 1512 aaPredicted RBP21.83■■□□□ 1.09
LINC00271-202ENST00000436554 IFT140Q96RY7 1462 aa21.8■■□□□ 1.08
LINC00271-202ENST00000436554 RIMBP3CA6NJZ7 1639 aa21.79■■□□□ 1.08
LINC00271-202ENST00000436554 RIMBP3BA6NNM3 1639 aa21.79■■□□□ 1.08
LINC00271-202ENST00000436554 RIMBP3Q9UFD9 1639 aa21.79■■□□□ 1.08
LINC00271-202ENST00000436554 CCDC88BA6NC98 1476 aa21.77■■□□□ 1.08
LINC00271-202ENST00000436554 CYB5RLQ6IPT4 315 aa21.75■■□□□ 1.07
LINC00271-202ENST00000436554 TOPBP1Q92547 1522 aa21.72■■□□□ 1.07
LINC00271-202ENST00000436554 ARHGEF11O15085 1522 aa21.71■■□□□ 1.07
LINC00271-202ENST00000436554 ABCC8Q09428 1581 aa21.65■■□□□ 1.06
LINC00271-202ENST00000436554 PRDM2Q13029 1718 aa21.64■■□□□ 1.06
LINC00271-202ENST00000436554 FBLN2P98095 1184 aa21.64■■□□□ 1.05
LINC00271-202ENST00000436554 AQRO60306 1485 aaKnown RBP eCLIP21.64■■□□□ 1.05
LINC00271-202ENST00000436554 TRHP20396 242 aaPredicted RBP21.61■■□□□ 1.05
LINC00271-202ENST00000436554 EIF4G3O43432 1585 aaKnown RBP21.57■■□□□ 1.04
LINC00271-202ENST00000436554 DNMBPQ6XZF7 1577 aa21.55■■□□□ 1.04
LINC00271-202ENST00000436554 TARBP1Q13395 1621 aaKnown RBP21.49■■□□□ 1.03
LINC00271-202ENST00000436554 ARAP1Q96P48 1450 aa21.49■■□□□ 1.03
LINC00271-202ENST00000436554 TDRD9Q8NDG6 1382 aaKnown RBP21.48■■□□□ 1.03
LINC00271-202ENST00000436554 POLA1P09884 1462 aaPredicted RBP21.47■■□□□ 1.03
LINC00271-202ENST00000436554 RAD54L2Q9Y4B4 1467 aa21.46■■□□□ 1.03
LINC00271-202ENST00000436554 CHD1O14646 1710 aa21.46■■□□□ 1.03
LINC00271-202ENST00000436554 SOGA1O94964 1423 aa21.45■■□□□ 1.02
LINC00271-202ENST00000436554 CHMP7Q8WUX9 453 aaPredicted RBP21.4■■□□□ 1.02
LINC00271-202ENST00000436554 SNAPC4Q5SXM2 1469 aa21.33■■□□□ 1.01
LINC00271-202ENST00000436554 FGD5Q6ZNL6 1462 aa21.29■■□□□ 1
LINC00271-202ENST00000436554 CLASP1Q7Z460 1538 aa21.25■□□□□ 0.99
LINC00271-202ENST00000436554 GRIN2BQ13224 1484 aa21.23■□□□□ 0.99
LINC00271-202ENST00000436554 MAGI1Q96QZ7 1491 aaPredicted RBP21.23■□□□□ 0.99
LINC00271-202ENST00000436554 CUX1P39880 1505 aa21.22■□□□□ 0.99
LINC00271-202ENST00000436554 SYNJ1O43426 1573 aa21.21■□□□□ 0.99
LINC00271-202ENST00000436554 SYNJ2O15056 1496 aa21.19■□□□□ 0.98
LINC00271-202ENST00000436554 WDR97A6NE52 1622 aa21.18■□□□□ 0.98
LINC00271-202ENST00000436554 GAPVD1Q14C86 1478 aa21.13■□□□□ 0.97
LINC00271-202ENST00000436554 ABCA10Q8WWZ4 1543 aa21.02■□□□□ 0.96
LINC00271-202ENST00000436554 PBRM1Q86U86 1689 aa20.99■□□□□ 0.95
LINC00271-202ENST00000436554 ERCC6L2Q5T890 1561 aa20.96■□□□□ 0.95
LINC00271-202ENST00000436554 GRIN2AQ12879 1464 aa20.94■□□□□ 0.94
LINC00271-202ENST00000436554 ABCA5Q8WWZ7 1642 aa20.94■□□□□ 0.94
LINC00271-202ENST00000436554 SUPT5HO00267 1087 aaKnown RBP20.94■□□□□ 0.94
LINC00271-202ENST00000436554 WRNQ14191 1432 aaPredicted RBP eCLIP20.92■□□□□ 0.94
LINC00271-202ENST00000436554 NUP160Q12769 1436 aa20.89■□□□□ 0.94
LINC00271-202ENST00000436554 CEP170Q5SW79 1584 aa20.87■□□□□ 0.93
LINC00271-202ENST00000436554 FHAD1B1AJZ9 1412 aa20.85■□□□□ 0.93
LINC00271-202ENST00000436554 ADAMTS12P58397 1594 aa20.82■□□□□ 0.92
LINC00271-202ENST00000436554 JPH4Q96JJ6 628 aa20.82■□□□□ 0.92
LINC00271-202ENST00000436554 PRG4Q92954 1404 aaPredicted RBP20.78■□□□□ 0.92
LINC00271-202ENST00000436554 CHIC1Q5VXU3 224 aa20.77■□□□□ 0.92
LINC00271-202ENST00000436554 SHROOM2Q13796 1616 aa20.75■□□□□ 0.91
LINC00271-202ENST00000436554 FAM69CQ0P6D2 419 aa20.73■□□□□ 0.91
LINC00271-202ENST00000436554 TOP2BQ02880 1626 aa20.73■□□□□ 0.91
LINC00271-202ENST00000436554 ERICH3Q5RHP9 1530 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms