Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 ENPP4-201ENST00000321037 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PRICKLE4Q2TBC4 AL592528.1-201ENST00000380008 3466 ntTSL 2 BASIC11.73□□□□□ -0.53
PRICKLE4Q2TBC4 ARL4A-203ENST00000396663 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PRICKLE4Q2TBC4 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PRICKLE4Q2TBC4 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PRICKLE4Q2TBC4 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
PRICKLE4Q2TBC4 C14orf159-203ENST00000412671 2591 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
PRICKLE4Q2TBC4 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PRICKLE4Q2TBC4 ARHGEF9-218ENST00000624843 2154 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 IST1-219ENST00000541571 1962 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 DCUN1D3-202ENST00000563934 1996 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 SLC25A14-213ENST00000543953 1403 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 PDPN-210ENST00000513143 1305 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 C22orf15-203ENST00000402217 829 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 AC104445.1-201ENST00000460597 749 ntTSL 3 BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 RN7SL578P-201ENST00000477781 283 ntBASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 LDHAL6CP-201ENST00000502352 1142 ntBASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 GSKIP-203ENST00000554182 760 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 ELP5-210ENST00000573657 687 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 FBXO36P1-201ENST00000579006 471 ntBASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 SNORD55-201ENST00000581525 80 ntBASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 AC005332.2-201ENST00000590010 930 ntBASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 AL109954.3-201ENST00000615088 558 ntBASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 CELF2-AS1-201ENST00000379256 2468 ntTSL 2 BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 AC008158.1-201ENST00000578759 3668 ntBASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 FMO6P-202ENST00000367754 2130 ntTSL 2 BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 PIK3C3-210ENST00000589056 2074 ntTSL 2 BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 LINC01898-201ENST00000564156 1903 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 AL357054.4-201ENST00000606285 2814 ntBASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 PCTP-202ENST00000325214 1856 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 LINC01443-202ENST00000584531 1854 ntTSL 2 BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PRICKLE4Q2TBC4 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 TNFSF10-202ENST00000420541 1619 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 PNP-201ENST00000361505 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 AOX3P-202ENST00000469595 1471 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 NCBP2-201ENST00000321256 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 PRIM1-201ENST00000338193 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 AL356583.1-201ENST00000398739 1371 ntBASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 DNAJB8-202ENST00000469083 3365 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 LIF-201ENST00000249075 3969 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 HAND2-204ENST00000621866 1337 ntTSL 5 BASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 AC007312.1-201ENST00000427493 258 ntBASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 EEF1DP5-201ENST00000431410 772 ntBASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 AC008267.3-201ENST00000448776 712 ntBASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 CDK4P1-201ENST00000454213 828 ntBASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 ALG1L15P-201ENST00000482834 794 ntBASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 IGHV3-6-201ENST00000518407 347 ntBASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC11.71□□□□□ -0.53
PRICKLE4Q2TBC4 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms