RNA–Protein interactions for RNA: ENST00000624843.3

ARHGEF9-218, Transcript of Cdc42 guanine nucleotide exchange factor 9, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF9, Length 2,154 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9-218ENST00000624843 NISCHQ9Y2I1 1504 aa26.6■■□□□ 1.85
ARHGEF9-218ENST00000624843 CCDC180Q9P1Z9 1646 aa22.78■■□□□ 1.24
ARHGEF9-218ENST00000624843 ZCCHC6Q5VYS8 1495 aaKnown RBP22.49■■□□□ 1.19
ARHGEF9-218ENST00000624843 SHROOM4Q9ULL8 1493 aa22.31■■□□□ 1.16
ARHGEF9-218ENST00000624843 DCAF1Q9Y4B6 1507 aa21.97■■□□□ 1.11
ARHGEF9-218ENST00000624843 SUPT5HO00267 1087 aaKnown RBP21.87■■□□□ 1.09
ARHGEF9-218ENST00000624843 DCAF8L2P0C7V8 631 aa21.78■■□□□ 1.08
ARHGEF9-218ENST00000624843 MYO15BQ96JP2 1530 aa21.4■■□□□ 1.02
ARHGEF9-218ENST00000624843 CHIC1Q5VXU3 224 aa21.34■■□□□ 1.01
ARHGEF9-218ENST00000624843 ABCC9O60706 1549 aa21.2■□□□□ 0.98
ARHGEF9-218ENST00000624843 SCRIBQ14160 1630 aa21.11■□□□□ 0.97
ARHGEF9-218ENST00000624843 NACADO15069 1562 aa21.05■□□□□ 0.96
ARHGEF9-218ENST00000624843 RSF1Q96T23 1441 aaPredicted RBP20.96■□□□□ 0.95
ARHGEF9-218ENST00000624843 RB1CC1Q8TDY2 1594 aa20.79■□□□□ 0.92
ARHGEF9-218ENST00000624843 CECR2Q9BXF3 1484 aa20.63■□□□□ 0.89
ARHGEF9-218ENST00000624843 MROH2BQ7Z745 1585 aa20.6■□□□□ 0.89
ARHGEF9-218ENST00000624843 LOC105371045A0A1W2PR82 267 aa20.59■□□□□ 0.89
ARHGEF9-218ENST00000624843 HRCP23327 699 aa20.53■□□□□ 0.88
ARHGEF9-218ENST00000624843 TRIM41Q8WV44 630 aa20.49■□□□□ 0.87
ARHGEF9-218ENST00000624843 PCGF6Q9BYE7 350 aa20.49■□□□□ 0.87
ARHGEF9-218ENST00000624843 WIZO95785 1651 aa20.48■□□□□ 0.87
ARHGEF9-218ENST00000624843 BAZ1AQ9NRL2 1556 aaPredicted RBP20.47■□□□□ 0.87
ARHGEF9-218ENST00000624843 UNC13AQ9UPW8 1703 aa20.34■□□□□ 0.85
ARHGEF9-218ENST00000624843 SMARCA4P51532 1647 aa20.27■□□□□ 0.84
ARHGEF9-218ENST00000624843 TRIM26Q12899 539 aaPredicted RBP20.27■□□□□ 0.83
ARHGEF9-218ENST00000624843 EIF4G1Q04637 1599 aaKnown RBP20.25■□□□□ 0.83
ARHGEF9-218ENST00000624843 TOP2AP11388 1531 aaKnown RBP20.25■□□□□ 0.83
ARHGEF9-218ENST00000624843 FAM9AQ8IZU1 332 aaPredicted RBP20.16■□□□□ 0.82
ARHGEF9-218ENST00000624843 SMARCA2P51531 1590 aa20.1■□□□□ 0.81
ARHGEF9-218ENST00000624843 CCDC88BA6NC98 1476 aa20.09■□□□□ 0.81
ARHGEF9-218ENST00000624843 BICRAQ9NZM4 1560 aa20.07■□□□□ 0.8
ARHGEF9-218ENST00000624843 PEG3Q9GZU2 1588 aa19.98■□□□□ 0.79
ARHGEF9-218ENST00000624843 PPARGC1BQ86YN6 1023 aaKnown RBP19.94■□□□□ 0.78
ARHGEF9-218ENST00000624843 ABCC8Q09428 1581 aa19.93■□□□□ 0.78
ARHGEF9-218ENST00000624843 PABPN1Q86U42 306 aaKnown RBP eCLIP19.9■□□□□ 0.78
ARHGEF9-218ENST00000624843 ZEB1P37275 1124 aaPredicted RBP19.87■□□□□ 0.77
ARHGEF9-218ENST00000624843 EHMT2Q96KQ7 1210 aa19.87■□□□□ 0.77
ARHGEF9-218ENST00000624843 EEA1Q15075 1411 aa19.82■□□□□ 0.76
ARHGEF9-218ENST00000624843 ATAD2BQ9ULI0 1458 aa19.75■□□□□ 0.75
ARHGEF9-218ENST00000624843 SOGA1O94964 1423 aa19.73■□□□□ 0.75
ARHGEF9-218ENST00000624843 WRNQ14191 1432 aaPredicted RBP eCLIP19.71■□□□□ 0.75
ARHGEF9-218ENST00000624843 TNIKQ9UKE5 1360 aa19.69■□□□□ 0.74
ARHGEF9-218ENST00000624843 BAZ1BQ9UIG0 1483 aaKnown RBP19.68■□□□□ 0.74
ARHGEF9-218ENST00000624843 CSRNP3Q8WYN3 585 aa19.67■□□□□ 0.74
ARHGEF9-218ENST00000624843 CEP162Q5TB80 1403 aa19.65■□□□□ 0.74
ARHGEF9-218ENST00000624843 RUSC2Q8N2Y8 1516 aa19.61■□□□□ 0.73
ARHGEF9-218ENST00000624843 GOLGA3Q08378 1498 aa19.59■□□□□ 0.73
ARHGEF9-218ENST00000624843 SYNJ1O43426 1573 aa19.58■□□□□ 0.72
ARHGEF9-218ENST00000624843 KIF21BO75037 1637 aa19.52■□□□□ 0.71
ARHGEF9-218ENST00000624843 CEP164Q9UPV0 1460 aa19.51■□□□□ 0.71
ARHGEF9-218ENST00000624843 UBTFP17480 764 aaKnown RBP19.5■□□□□ 0.71
ARHGEF9-218ENST00000624843 HMGXB3Q12766 1538 aa19.46■□□□□ 0.71
ARHGEF9-218ENST00000624843 NCAPD3P42695 1498 aa19.44■□□□□ 0.7
ARHGEF9-218ENST00000624843 TOP2BQ02880 1626 aa19.43■□□□□ 0.7
ARHGEF9-218ENST00000624843 BIVM-ERCC5R4GMW8 1640 aa19.39■□□□□ 0.69
ARHGEF9-218ENST00000624843 CCER1Q8TC90 406 aaPredicted RBP19.34■□□□□ 0.69
ARHGEF9-218ENST00000624843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.33■□□□□ 0.69
ARHGEF9-218ENST00000624843 CLIP1P30622 1438 aa19.31■□□□□ 0.68
ARHGEF9-218ENST00000624843 RAPGEF2Q9Y4G8 1499 aa19.29■□□□□ 0.68
ARHGEF9-218ENST00000624843 VPS8Q8N3P4 1428 aa19.26■□□□□ 0.67
ARHGEF9-218ENST00000624843 ERICH3Q5RHP9 1530 aa19.24■□□□□ 0.67
ARHGEF9-218ENST00000624843 CFTRP13569 1480 aa19.24■□□□□ 0.67
ARHGEF9-218ENST00000624843 TTBK1Q5TCY1 1321 aaPredicted RBP19.23■□□□□ 0.67
ARHGEF9-218ENST00000624843 PRXQ9BXM0 1461 aa19.2■□□□□ 0.66
ARHGEF9-218ENST00000624843 CUX1P39880 1505 aa19.2■□□□□ 0.66
ARHGEF9-218ENST00000624843 PRDM2Q13029 1718 aa19.17■□□□□ 0.66
ARHGEF9-218ENST00000624843 KIF27Q86VH2 1401 aa19.12■□□□□ 0.65
ARHGEF9-218ENST00000624843 APLP2Q06481 763 aa19.11■□□□□ 0.65
ARHGEF9-218ENST00000624843 ARAP1Q96P48 1450 aa19.02■□□□□ 0.63
ARHGEF9-218ENST00000624843 CADPSQ9ULU8 1353 aa19.01■□□□□ 0.63
ARHGEF9-218ENST00000624843 RANGAP1P46060 587 aaPredicted RBP18.96■□□□□ 0.63
ARHGEF9-218ENST00000624843 HNRNPUL2Q1KMD3 747 aaKnown RBP18.95■□□□□ 0.62
ARHGEF9-218ENST00000624843 SCAF1Q9H7N4 1312 aaKnown RBP18.94■□□□□ 0.62
ARHGEF9-218ENST00000624843 PELP1Q8IZL8 1130 aaKnown RBP18.93■□□□□ 0.62
ARHGEF9-218ENST00000624843 DIEXFQ68CQ4 756 aaKnown RBP18.92■□□□□ 0.62
ARHGEF9-218ENST00000624843 CC2D2AQ9P2K1 1620 aa18.92■□□□□ 0.62
ARHGEF9-218ENST00000624843 CUX2O14529 1486 aa18.9■□□□□ 0.62
ARHGEF9-218ENST00000624843 IGF1RP08069 1367 aa18.89■□□□□ 0.61
ARHGEF9-218ENST00000624843 ARHGAP35Q9NRY4 1499 aa18.88■□□□□ 0.61
ARHGEF9-218ENST00000624843 FGD5Q6ZNL6 1462 aa18.87■□□□□ 0.61
ARHGEF9-218ENST00000624843 ZNF316A6NFI3 1004 aaPredicted RBP18.86■□□□□ 0.61
ARHGEF9-218ENST00000624843 RRBP1Q9P2E9 1410 aaKnown RBP18.82■□□□□ 0.6
ARHGEF9-218ENST00000624843 KANK4Q5T7N3 995 aaPredicted RBP18.82■□□□□ 0.6
ARHGEF9-218ENST00000624843 CLSPNQ9HAW4 1339 aa18.81■□□□□ 0.6
ARHGEF9-218ENST00000624843 CARMIL1Q5VZK9 1371 aa18.81■□□□□ 0.6
ARHGEF9-218ENST00000624843 FANCD2Q9BXW9 1451 aa18.8■□□□□ 0.6
ARHGEF9-218ENST00000624843 MAP3K1Q13233 1512 aa18.78■□□□□ 0.6
ARHGEF9-218ENST00000624843 DNMBPQ6XZF7 1577 aa18.76■□□□□ 0.59
ARHGEF9-218ENST00000624843 ACIN1Q9UKV3 1341 aaKnown RBP18.73■□□□□ 0.59
ARHGEF9-218ENST00000624843 ABCA10Q8WWZ4 1543 aa18.71■□□□□ 0.59
ARHGEF9-218ENST00000624843 CCNB3Q8WWL7 1395 aa18.7■□□□□ 0.58
ARHGEF9-218ENST00000624843 DHX57Q6P158 1386 aaKnown RBP18.7■□□□□ 0.58
ARHGEF9-218ENST00000624843 TIAM1Q13009 1591 aa18.69■□□□□ 0.58
ARHGEF9-218ENST00000624843 TOPBP1Q92547 1522 aa18.69■□□□□ 0.58
ARHGEF9-218ENST00000624843 CENPBP07199 599 aaPredicted RBP18.68■□□□□ 0.58
ARHGEF9-218ENST00000624843 FHAD1B1AJZ9 1412 aa18.67■□□□□ 0.58
ARHGEF9-218ENST00000624843 POLA1P09884 1462 aaPredicted RBP18.66■□□□□ 0.58
ARHGEF9-218ENST00000624843 NEUROD1Q13562 356 aa18.64■□□□□ 0.57
ARHGEF9-218ENST00000624843 LAMC3Q9Y6N6 1575 aa18.64■□□□□ 0.57
ARHGEF9-218ENST00000624843 CUL7Q14999 1698 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms