RNA–Protein interactions for RNA: ENST00000518407.1

IGHV3-6-201, Transcript of immunoglobulin heavy variable 3-6 (pseudogene), humanhuman

BASIC

Gene IGHV3-6, Length 347 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-6-201ENST00000518407 NISCHQ9Y2I1 1504 aa30.36■■■□□ 2.45
IGHV3-6-201ENST00000518407 CCDC180Q9P1Z9 1646 aa26.99■■□□□ 1.91
IGHV3-6-201ENST00000518407 ABCC9O60706 1549 aa25.95■■□□□ 1.74
IGHV3-6-201ENST00000518407 ZCCHC6Q5VYS8 1495 aaKnown RBP25.39■■□□□ 1.65
IGHV3-6-201ENST00000518407 NACADO15069 1562 aa25.21■■□□□ 1.63
IGHV3-6-201ENST00000518407 MYO15BQ96JP2 1530 aa25.17■■□□□ 1.62
IGHV3-6-201ENST00000518407 DCAF1Q9Y4B6 1507 aa25.17■■□□□ 1.62
IGHV3-6-201ENST00000518407 RB1CC1Q8TDY2 1594 aa25.16■■□□□ 1.62
IGHV3-6-201ENST00000518407 DCAF8L2P0C7V8 631 aa24.97■■□□□ 1.59
IGHV3-6-201ENST00000518407 UNC13AQ9UPW8 1703 aa24.81■■□□□ 1.56
IGHV3-6-201ENST00000518407 SCRIBQ14160 1630 aa24.56■■□□□ 1.52
IGHV3-6-201ENST00000518407 BICRAQ9NZM4 1560 aa24.46■■□□□ 1.51
IGHV3-6-201ENST00000518407 PABPN1Q86U42 306 aaKnown RBP eCLIP24.2■■□□□ 1.46
IGHV3-6-201ENST00000518407 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
IGHV3-6-201ENST00000518407 EIF4G1Q04637 1599 aaKnown RBP23.74■■□□□ 1.39
IGHV3-6-201ENST00000518407 CECR2Q9BXF3 1484 aa23.59■■□□□ 1.37
IGHV3-6-201ENST00000518407 CC2D2AQ9P2K1 1620 aa23.59■■□□□ 1.37
IGHV3-6-201ENST00000518407 SMARCA4P51532 1647 aa23.55■■□□□ 1.36
IGHV3-6-201ENST00000518407 DNAJC5BQ9UF47 199 aa23.52■■□□□ 1.36
IGHV3-6-201ENST00000518407 BAZ1AQ9NRL2 1556 aaPredicted RBP23.51■■□□□ 1.35
IGHV3-6-201ENST00000518407 MROH2BQ7Z745 1585 aa23.4■■□□□ 1.34
IGHV3-6-201ENST00000518407 PEG3Q9GZU2 1588 aa23.34■■□□□ 1.33
IGHV3-6-201ENST00000518407 SMARCA2P51531 1590 aa23.28■■□□□ 1.32
IGHV3-6-201ENST00000518407 ATAD2BQ9ULI0 1458 aa23.27■■□□□ 1.32
IGHV3-6-201ENST00000518407 WIZO95785 1651 aa23.22■■□□□ 1.31
IGHV3-6-201ENST00000518407 NCAPD3P42695 1498 aa23.21■■□□□ 1.31
IGHV3-6-201ENST00000518407 HMGXB3Q12766 1538 aa23.2■■□□□ 1.3
IGHV3-6-201ENST00000518407 RSF1Q96T23 1441 aaPredicted RBP23.19■■□□□ 1.3
IGHV3-6-201ENST00000518407 BAZ1BQ9UIG0 1483 aaKnown RBP23.08■■□□□ 1.29
IGHV3-6-201ENST00000518407 TOP2AP11388 1531 aaKnown RBP22.96■■□□□ 1.27
IGHV3-6-201ENST00000518407 SUPT5HO00267 1087 aaKnown RBP22.65■■□□□ 1.22
IGHV3-6-201ENST00000518407 CCDC88BA6NC98 1476 aa22.63■■□□□ 1.21
IGHV3-6-201ENST00000518407 LAMC3Q9Y6N6 1575 aa22.62■■□□□ 1.21
IGHV3-6-201ENST00000518407 NESP48681 1621 aa22.58■■□□□ 1.21
IGHV3-6-201ENST00000518407 PRDM2Q13029 1718 aa22.57■■□□□ 1.2
IGHV3-6-201ENST00000518407 CADPSQ9ULU8 1353 aa22.5■■□□□ 1.19
IGHV3-6-201ENST00000518407 CFTRP13569 1480 aa22.48■■□□□ 1.19
IGHV3-6-201ENST00000518407 KIF21AQ7Z4S6 1674 aa22.46■■□□□ 1.19
IGHV3-6-201ENST00000518407 PDS5BQ9NTI5 1447 aa22.33■■□□□ 1.17
IGHV3-6-201ENST00000518407 ERCC6Q03468 1493 aa22.31■■□□□ 1.16
IGHV3-6-201ENST00000518407 THOC2Q8NI27 1593 aaKnown RBP22.29■■□□□ 1.16
IGHV3-6-201ENST00000518407 FANCD2Q9BXW9 1451 aa22.28■■□□□ 1.16
IGHV3-6-201ENST00000518407 CEP164Q9UPV0 1460 aa22.23■■□□□ 1.15
IGHV3-6-201ENST00000518407 MRC2Q9UBG0 1479 aa22.15■■□□□ 1.14
IGHV3-6-201ENST00000518407 WDR62O43379 1518 aa22.13■■□□□ 1.13
IGHV3-6-201ENST00000518407 URB2Q14146 1524 aaKnown RBP22.09■■□□□ 1.13
IGHV3-6-201ENST00000518407 CUX2O14529 1486 aa22.05■■□□□ 1.12
IGHV3-6-201ENST00000518407 DNMBPQ6XZF7 1577 aa22.03■■□□□ 1.12
IGHV3-6-201ENST00000518407 TOPBP1Q92547 1522 aa22■■□□□ 1.11
IGHV3-6-201ENST00000518407 ABCC8Q09428 1581 aa21.96■■□□□ 1.11
IGHV3-6-201ENST00000518407 CUX1P39880 1505 aa21.96■■□□□ 1.11
IGHV3-6-201ENST00000518407 BIVM-ERCC5R4GMW8 1640 aa21.91■■□□□ 1.1
IGHV3-6-201ENST00000518407 SYNJ1O43426 1573 aa21.87■■□□□ 1.09
IGHV3-6-201ENST00000518407 TOP2BQ02880 1626 aa21.87■■□□□ 1.09
IGHV3-6-201ENST00000518407 WRNQ14191 1432 aaPredicted RBP eCLIP21.84■■□□□ 1.09
IGHV3-6-201ENST00000518407 POLA1P09884 1462 aaPredicted RBP21.82■■□□□ 1.08
IGHV3-6-201ENST00000518407 TARBP1Q13395 1621 aaKnown RBP21.8■■□□□ 1.08
IGHV3-6-201ENST00000518407 FGD5Q6ZNL6 1462 aa21.8■■□□□ 1.08
IGHV3-6-201ENST00000518407 WDR97A6NE52 1622 aa21.78■■□□□ 1.08
IGHV3-6-201ENST00000518407 IFT140Q96RY7 1462 aa21.75■■□□□ 1.07
IGHV3-6-201ENST00000518407 RAD54L2Q9Y4B4 1467 aa21.69■■□□□ 1.06
IGHV3-6-201ENST00000518407 EIF4G3O43432 1585 aaKnown RBP21.65■■□□□ 1.06
IGHV3-6-201ENST00000518407 SOGA1O94964 1423 aa21.65■■□□□ 1.06
IGHV3-6-201ENST00000518407 ZNF608Q9ULD9 1512 aaPredicted RBP21.65■■□□□ 1.06
IGHV3-6-201ENST00000518407 ABCA10Q8WWZ4 1543 aa21.62■■□□□ 1.05
IGHV3-6-201ENST00000518407 ABCA5Q8WWZ7 1642 aa21.58■■□□□ 1.05
IGHV3-6-201ENST00000518407 PBRM1Q86U86 1689 aa21.56■■□□□ 1.04
IGHV3-6-201ENST00000518407 AQRO60306 1485 aaKnown RBP eCLIP21.51■■□□□ 1.03
IGHV3-6-201ENST00000518407 TDRD9Q8NDG6 1382 aaKnown RBP21.48■■□□□ 1.03
IGHV3-6-201ENST00000518407 GAPVD1Q14C86 1478 aa21.45■■□□□ 1.02
IGHV3-6-201ENST00000518407 GRIN2BQ13224 1484 aa21.4■■□□□ 1.02
IGHV3-6-201ENST00000518407 CHD1O14646 1710 aa21.38■■□□□ 1.01
IGHV3-6-201ENST00000518407 TRIM41Q8WV44 630 aa21.38■■□□□ 1.01
IGHV3-6-201ENST00000518407 ERICH3Q5RHP9 1530 aa21.38■■□□□ 1.01
IGHV3-6-201ENST00000518407 CHIC1Q5VXU3 224 aa21.37■■□□□ 1.01
IGHV3-6-201ENST00000518407 SNAPC4Q5SXM2 1469 aa21.37■■□□□ 1.01
IGHV3-6-201ENST00000518407 MAGI1Q96QZ7 1491 aaPredicted RBP21.35■■□□□ 1.01
IGHV3-6-201ENST00000518407 ADAMTS12P58397 1594 aa21.35■■□□□ 1.01
IGHV3-6-201ENST00000518407 KIF27Q86VH2 1401 aa21.33■■□□□ 1.01
IGHV3-6-201ENST00000518407 CUL7Q14999 1698 aa21.29■■□□□ 1
IGHV3-6-201ENST00000518407 RUSC2Q8N2Y8 1516 aa21.29■■□□□ 1
IGHV3-6-201ENST00000518407 SYNJ2O15056 1496 aa21.25■□□□□ 0.99
IGHV3-6-201ENST00000518407 IGF1RP08069 1367 aa21.21■□□□□ 0.99
IGHV3-6-201ENST00000518407 FHAD1B1AJZ9 1412 aa21.21■□□□□ 0.99
IGHV3-6-201ENST00000518407 GRIN2AQ12879 1464 aa21.16■□□□□ 0.98
IGHV3-6-201ENST00000518407 EEA1Q15075 1411 aa21.13■□□□□ 0.97
IGHV3-6-201ENST00000518407 CEP170Q5SW79 1584 aa21.1■□□□□ 0.97
IGHV3-6-201ENST00000518407 CLASP1Q7Z460 1538 aa21.1■□□□□ 0.97
IGHV3-6-201ENST00000518407 CARMIL1Q5VZK9 1371 aa21.08■□□□□ 0.96
IGHV3-6-201ENST00000518407 CHMP7Q8WUX9 453 aaPredicted RBP21.07■□□□□ 0.96
IGHV3-6-201ENST00000518407 NUP160Q12769 1436 aa21.06■□□□□ 0.96
IGHV3-6-201ENST00000518407 FBLN2P98095 1184 aa21.06■□□□□ 0.96
IGHV3-6-201ENST00000518407 PRXQ9BXM0 1461 aa21.06■□□□□ 0.96
IGHV3-6-201ENST00000518407 RAPGEF2Q9Y4G8 1499 aa21.03■□□□□ 0.96
IGHV3-6-201ENST00000518407 OSCARQ8IYS5 282 aa21.03■□□□□ 0.96
IGHV3-6-201ENST00000518407 KIF21BO75037 1637 aa21.01■□□□□ 0.95
IGHV3-6-201ENST00000518407 CTTNBP2Q8WZ74 1663 aa21■□□□□ 0.95
IGHV3-6-201ENST00000518407 SHROOM2Q13796 1616 aa20.97■□□□□ 0.95
IGHV3-6-201ENST00000518407 CSRNP3Q8WYN3 585 aa20.97■□□□□ 0.95
IGHV3-6-201ENST00000518407 DNAJC5Q9H3Z4 198 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms