RNA–Protein interactions for RNA: ENST00000420541.6

TNFSF10-202, Transcript of TNF superfamily member 10, humanhuman

TSL 1 (best) BASIC

Gene TNFSF10, Length 1,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF10-202ENST00000420541 NISCHQ9Y2I1 1504 aa28.39■■■□□ 2.14
TNFSF10-202ENST00000420541 CCDC180Q9P1Z9 1646 aa24.8■■□□□ 1.56
TNFSF10-202ENST00000420541 AEBP2Q6ZN18 517 aaPredicted RBP24.07■■□□□ 1.44
TNFSF10-202ENST00000420541 ZCCHC6Q5VYS8 1495 aaKnown RBP23.82■■□□□ 1.4
TNFSF10-202ENST00000420541 DCAF8L2P0C7V8 631 aa23.57■■□□□ 1.36
TNFSF10-202ENST00000420541 ABCC9O60706 1549 aa23.55■■□□□ 1.36
TNFSF10-202ENST00000420541 DCAF1Q9Y4B6 1507 aa23.49■■□□□ 1.35
TNFSF10-202ENST00000420541 MYO15BQ96JP2 1530 aa23.25■■□□□ 1.31
TNFSF10-202ENST00000420541 NACADO15069 1562 aa23.16■■□□□ 1.3
TNFSF10-202ENST00000420541 SHROOM4Q9ULL8 1493 aa23.11■■□□□ 1.29
TNFSF10-202ENST00000420541 RB1CC1Q8TDY2 1594 aa22.99■■□□□ 1.27
TNFSF10-202ENST00000420541 SCRIBQ14160 1630 aa22.79■■□□□ 1.24
TNFSF10-202ENST00000420541 CHIC1Q5VXU3 224 aa22.49■■□□□ 1.19
TNFSF10-202ENST00000420541 UNC13AQ9UPW8 1703 aa22.39■■□□□ 1.18
TNFSF10-202ENST00000420541 SUPT5HO00267 1087 aaKnown RBP22.24■■□□□ 1.15
TNFSF10-202ENST00000420541 PABPN1Q86U42 306 aaKnown RBP eCLIP22.2■■□□□ 1.15
TNFSF10-202ENST00000420541 BICRAQ9NZM4 1560 aa22.2■■□□□ 1.14
TNFSF10-202ENST00000420541 CECR2Q9BXF3 1484 aa22.04■■□□□ 1.12
TNFSF10-202ENST00000420541 RSF1Q96T23 1441 aaPredicted RBP21.98■■□□□ 1.11
TNFSF10-202ENST00000420541 BAZ1AQ9NRL2 1556 aaPredicted RBP21.96■■□□□ 1.11
TNFSF10-202ENST00000420541 MROH2BQ7Z745 1585 aa21.9■■□□□ 1.1
TNFSF10-202ENST00000420541 SMARCA4P51532 1647 aa21.84■■□□□ 1.09
TNFSF10-202ENST00000420541 WIZO95785 1651 aa21.71■■□□□ 1.07
TNFSF10-202ENST00000420541 EIF4G1Q04637 1599 aaKnown RBP21.59■■□□□ 1.05
TNFSF10-202ENST00000420541 PEG3Q9GZU2 1588 aa21.56■■□□□ 1.04
TNFSF10-202ENST00000420541 SMARCA2P51531 1590 aa21.54■■□□□ 1.04
TNFSF10-202ENST00000420541 TOP2AP11388 1531 aaKnown RBP21.54■■□□□ 1.04
TNFSF10-202ENST00000420541 ATAD2BQ9ULI0 1458 aa21.51■■□□□ 1.03
TNFSF10-202ENST00000420541 BAZ1BQ9UIG0 1483 aaKnown RBP21.43■■□□□ 1.02
TNFSF10-202ENST00000420541 NCAPD3P42695 1498 aa21.36■■□□□ 1.01
TNFSF10-202ENST00000420541 HMGXB3Q12766 1538 aa21.31■■□□□ 1
TNFSF10-202ENST00000420541 CCDC88BA6NC98 1476 aa21.3■■□□□ 1
TNFSF10-202ENST00000420541 CC2D2AQ9P2K1 1620 aa21.29■■□□□ 1
TNFSF10-202ENST00000420541 TRIM41Q8WV44 630 aa20.95■□□□□ 0.94
TNFSF10-202ENST00000420541 POTEDQ86YR6 584 aa20.86■□□□□ 0.93
TNFSF10-202ENST00000420541 CFTRP13569 1480 aa20.85■□□□□ 0.93
TNFSF10-202ENST00000420541 CADPSQ9ULU8 1353 aa20.82■□□□□ 0.92
TNFSF10-202ENST00000420541 DNAJC5BQ9UF47 199 aa20.79■□□□□ 0.92
TNFSF10-202ENST00000420541 ABCC8Q09428 1581 aa20.79■□□□□ 0.92
TNFSF10-202ENST00000420541 SENP3Q9H4L4 574 aaPredicted RBP20.77■□□□□ 0.92
TNFSF10-202ENST00000420541 WRNQ14191 1432 aaPredicted RBP eCLIP20.74■□□□□ 0.91
TNFSF10-202ENST00000420541 PRDM2Q13029 1718 aa20.7■□□□□ 0.9
TNFSF10-202ENST00000420541 LAMC3Q9Y6N6 1575 aa20.65■□□□□ 0.9
TNFSF10-202ENST00000420541 NESP48681 1621 aa20.6■□□□□ 0.89
TNFSF10-202ENST00000420541 SYNJ1O43426 1573 aa20.59■□□□□ 0.89
TNFSF10-202ENST00000420541 FANCD2Q9BXW9 1451 aa20.58■□□□□ 0.89
TNFSF10-202ENST00000420541 PDS5BQ9NTI5 1447 aa20.55■□□□□ 0.88
TNFSF10-202ENST00000420541 TOP2BQ02880 1626 aa20.54■□□□□ 0.88
TNFSF10-202ENST00000420541 FAM9AQ8IZU1 332 aaPredicted RBP20.53■□□□□ 0.88
TNFSF10-202ENST00000420541 BIVM-ERCC5R4GMW8 1640 aa20.51■□□□□ 0.87
TNFSF10-202ENST00000420541 CUX1P39880 1505 aa20.49■□□□□ 0.87
TNFSF10-202ENST00000420541 CEP164Q9UPV0 1460 aa20.48■□□□□ 0.87
TNFSF10-202ENST00000420541 EEA1Q15075 1411 aa20.44■□□□□ 0.86
TNFSF10-202ENST00000420541 SOGA1O94964 1423 aa20.4■□□□□ 0.86
TNFSF10-202ENST00000420541 DNMBPQ6XZF7 1577 aa20.38■□□□□ 0.85
TNFSF10-202ENST00000420541 LOC105371045A0A1W2PR82 267 aa20.37■□□□□ 0.85
TNFSF10-202ENST00000420541 KIF21AQ7Z4S6 1674 aa20.35■□□□□ 0.85
TNFSF10-202ENST00000420541 TOPBP1Q92547 1522 aa20.34■□□□□ 0.85
TNFSF10-202ENST00000420541 CSRNP3Q8WYN3 585 aa20.32■□□□□ 0.84
TNFSF10-202ENST00000420541 FGD5Q6ZNL6 1462 aa20.32■□□□□ 0.84
TNFSF10-202ENST00000420541 RUSC2Q8N2Y8 1516 aa20.3■□□□□ 0.84
TNFSF10-202ENST00000420541 PHF23Q9BUL5 403 aaPredicted RBP20.3■□□□□ 0.84
TNFSF10-202ENST00000420541 URB2Q14146 1524 aaKnown RBP20.3■□□□□ 0.84
TNFSF10-202ENST00000420541 ERCC6Q03468 1493 aa20.27■□□□□ 0.83
TNFSF10-202ENST00000420541 MRC2Q9UBG0 1479 aa20.26■□□□□ 0.83
TNFSF10-202ENST00000420541 KIF27Q86VH2 1401 aa20.25■□□□□ 0.83
TNFSF10-202ENST00000420541 EHMT2Q96KQ7 1210 aa20.23■□□□□ 0.83
TNFSF10-202ENST00000420541 POLA1P09884 1462 aaPredicted RBP20.22■□□□□ 0.83
TNFSF10-202ENST00000420541 CUX2O14529 1486 aa20.2■□□□□ 0.82
TNFSF10-202ENST00000420541 RAD54L2Q9Y4B4 1467 aa20.15■□□□□ 0.82
TNFSF10-202ENST00000420541 ABCA10Q8WWZ4 1543 aa20.14■□□□□ 0.81
TNFSF10-202ENST00000420541 GOLGA3Q08378 1498 aa20.13■□□□□ 0.81
TNFSF10-202ENST00000420541 WDR62O43379 1518 aa20.12■□□□□ 0.81
TNFSF10-202ENST00000420541 KIF21BO75037 1637 aa20.11■□□□□ 0.81
TNFSF10-202ENST00000420541 UBTFP17480 764 aaKnown RBP20.09■□□□□ 0.81
TNFSF10-202ENST00000420541 THOC2Q8NI27 1593 aaKnown RBP20.05■□□□□ 0.8
TNFSF10-202ENST00000420541 TNIKQ9UKE5 1360 aa20.04■□□□□ 0.8
TNFSF10-202ENST00000420541 IGF1RP08069 1367 aa20.03■□□□□ 0.8
TNFSF10-202ENST00000420541 PRXQ9BXM0 1461 aa20.03■□□□□ 0.8
TNFSF10-202ENST00000420541 WDR97A6NE52 1622 aa20.02■□□□□ 0.8
TNFSF10-202ENST00000420541 IFT140Q96RY7 1462 aa20.01■□□□□ 0.79
TNFSF10-202ENST00000420541 ERICH3Q5RHP9 1530 aa20.01■□□□□ 0.79
TNFSF10-202ENST00000420541 TARBP1Q13395 1621 aaKnown RBP20■□□□□ 0.79
TNFSF10-202ENST00000420541 RAPGEF2Q9Y4G8 1499 aa20■□□□□ 0.79
TNFSF10-202ENST00000420541 TDRD9Q8NDG6 1382 aaKnown RBP19.99■□□□□ 0.79
TNFSF10-202ENST00000420541 CARMIL1Q5VZK9 1371 aa19.96■□□□□ 0.79
TNFSF10-202ENST00000420541 GAPVD1Q14C86 1478 aa19.96■□□□□ 0.79
TNFSF10-202ENST00000420541 ABCA5Q8WWZ7 1642 aa19.95■□□□□ 0.78
TNFSF10-202ENST00000420541 CEP162Q5TB80 1403 aa19.9■□□□□ 0.78
TNFSF10-202ENST00000420541 CUL7Q14999 1698 aa19.9■□□□□ 0.78
TNFSF10-202ENST00000420541 AQRO60306 1485 aaKnown RBP eCLIP19.87■□□□□ 0.77
TNFSF10-202ENST00000420541 GRIN2BQ13224 1484 aa19.84■□□□□ 0.77
TNFSF10-202ENST00000420541 ZNF608Q9ULD9 1512 aaPredicted RBP19.83■□□□□ 0.77
TNFSF10-202ENST00000420541 PBRM1Q86U86 1689 aa19.81■□□□□ 0.76
TNFSF10-202ENST00000420541 CLIP1P30622 1438 aa19.8■□□□□ 0.76
TNFSF10-202ENST00000420541 EIF4G3O43432 1585 aaKnown RBP19.77■□□□□ 0.76
TNFSF10-202ENST00000420541 FHAD1B1AJZ9 1412 aa19.76■□□□□ 0.75
TNFSF10-202ENST00000420541 RANGAP1P46060 587 aaPredicted RBP19.76■□□□□ 0.75
TNFSF10-202ENST00000420541 ADAMTS12P58397 1594 aa19.72■□□□□ 0.75
TNFSF10-202ENST00000420541 SNAPC4Q5SXM2 1469 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms