RNA–Protein interactions for RNA: ENST00000615088.1

AL109954.3-201, humanhuman

BASIC

Gene AL109954.3, Length 558 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL109954.3-201ENST00000615088 NISCHQ9Y2I1 1504 aa31.36■■■□□ 2.61
AL109954.3-201ENST00000615088 CCDC180Q9P1Z9 1646 aa28.01■■■□□ 2.07
AL109954.3-201ENST00000615088 ABCC9O60706 1549 aa27.77■■■□□ 2.04
AL109954.3-201ENST00000615088 RB1CC1Q8TDY2 1594 aa26.57■■□□□ 1.84
AL109954.3-201ENST00000615088 NACADO15069 1562 aa26.45■■□□□ 1.82
AL109954.3-201ENST00000615088 DCAF8L2P0C7V8 631 aa26.42■■□□□ 1.82
AL109954.3-201ENST00000615088 MYO15BQ96JP2 1530 aa26.17■■□□□ 1.78
AL109954.3-201ENST00000615088 ZCCHC6Q5VYS8 1495 aaKnown RBP26.05■■□□□ 1.76
AL109954.3-201ENST00000615088 DCAF1Q9Y4B6 1507 aa25.93■■□□□ 1.74
AL109954.3-201ENST00000615088 PABPN1Q86U42 306 aaKnown RBP eCLIP25.9■■□□□ 1.74
AL109954.3-201ENST00000615088 UNC13AQ9UPW8 1703 aa25.83■■□□□ 1.73
AL109954.3-201ENST00000615088 DNAJC5BQ9UF47 199 aa25.73■■□□□ 1.71
AL109954.3-201ENST00000615088 BICRAQ9NZM4 1560 aa25.7■■□□□ 1.71
AL109954.3-201ENST00000615088 SCRIBQ14160 1630 aa25.55■■□□□ 1.68
AL109954.3-201ENST00000615088 SHROOM4Q9ULL8 1493 aa25.48■■□□□ 1.67
AL109954.3-201ENST00000615088 EIF4G1Q04637 1599 aaKnown RBP25.1■■□□□ 1.61
AL109954.3-201ENST00000615088 CC2D2AQ9P2K1 1620 aa25.07■■□□□ 1.6
AL109954.3-201ENST00000615088 CECR2Q9BXF3 1484 aa24.99■■□□□ 1.59
AL109954.3-201ENST00000615088 NCAPD3P42695 1498 aa24.4■■□□□ 1.5
AL109954.3-201ENST00000615088 SMARCA4P51532 1647 aa24.39■■□□□ 1.5
AL109954.3-201ENST00000615088 ATAD2BQ9ULI0 1458 aa24.37■■□□□ 1.49
AL109954.3-201ENST00000615088 BAZ1AQ9NRL2 1556 aaPredicted RBP24.35■■□□□ 1.49
AL109954.3-201ENST00000615088 SMARCA2P51531 1590 aa24.33■■□□□ 1.49
AL109954.3-201ENST00000615088 HMGXB3Q12766 1538 aa24.25■■□□□ 1.47
AL109954.3-201ENST00000615088 BAZ1BQ9UIG0 1483 aaKnown RBP24.17■■□□□ 1.46
AL109954.3-201ENST00000615088 MROH2BQ7Z745 1585 aa24.15■■□□□ 1.46
AL109954.3-201ENST00000615088 PEG3Q9GZU2 1588 aa24.15■■□□□ 1.46
AL109954.3-201ENST00000615088 ERCC6Q03468 1493 aa24■■□□□ 1.43
AL109954.3-201ENST00000615088 NESP48681 1621 aa23.89■■□□□ 1.42
AL109954.3-201ENST00000615088 WIZO95785 1651 aa23.86■■□□□ 1.41
AL109954.3-201ENST00000615088 CUX2O14529 1486 aa23.84■■□□□ 1.41
AL109954.3-201ENST00000615088 LAMC3Q9Y6N6 1575 aa23.82■■□□□ 1.4
AL109954.3-201ENST00000615088 RSF1Q96T23 1441 aaPredicted RBP23.76■■□□□ 1.39
AL109954.3-201ENST00000615088 PDS5BQ9NTI5 1447 aa23.71■■□□□ 1.39
AL109954.3-201ENST00000615088 CADPSQ9ULU8 1353 aa23.69■■□□□ 1.38
AL109954.3-201ENST00000615088 TOP2AP11388 1531 aaKnown RBP23.63■■□□□ 1.37
AL109954.3-201ENST00000615088 THOC2Q8NI27 1593 aaKnown RBP23.6■■□□□ 1.37
AL109954.3-201ENST00000615088 KIF21AQ7Z4S6 1674 aa23.57■■□□□ 1.36
AL109954.3-201ENST00000615088 DNAJC5Q9H3Z4 198 aa23.48■■□□□ 1.35
AL109954.3-201ENST00000615088 CFTRP13569 1480 aa23.46■■□□□ 1.35
AL109954.3-201ENST00000615088 MRC2Q9UBG0 1479 aa23.46■■□□□ 1.35
AL109954.3-201ENST00000615088 CEP164Q9UPV0 1460 aa23.43■■□□□ 1.34
AL109954.3-201ENST00000615088 FANCD2Q9BXW9 1451 aa23.42■■□□□ 1.34
AL109954.3-201ENST00000615088 WDR62O43379 1518 aa23.37■■□□□ 1.33
AL109954.3-201ENST00000615088 CCDC88BA6NC98 1476 aa23.35■■□□□ 1.33
AL109954.3-201ENST00000615088 PRDM2Q13029 1718 aa23.19■■□□□ 1.3
AL109954.3-201ENST00000615088 URB2Q14146 1524 aaKnown RBP23.18■■□□□ 1.3
AL109954.3-201ENST00000615088 ABCC8Q09428 1581 aa23.01■■□□□ 1.27
AL109954.3-201ENST00000615088 TOPBP1Q92547 1522 aa22.99■■□□□ 1.27
AL109954.3-201ENST00000615088 SUPT5HO00267 1087 aaKnown RBP22.98■■□□□ 1.27
AL109954.3-201ENST00000615088 IFT140Q96RY7 1462 aa22.96■■□□□ 1.27
AL109954.3-201ENST00000615088 DNMBPQ6XZF7 1577 aa22.94■■□□□ 1.26
AL109954.3-201ENST00000615088 ZNF608Q9ULD9 1512 aaPredicted RBP22.84■■□□□ 1.25
AL109954.3-201ENST00000615088 OSCARQ8IYS5 282 aa22.82■■□□□ 1.24
AL109954.3-201ENST00000615088 POLA1P09884 1462 aaPredicted RBP22.77■■□□□ 1.24
AL109954.3-201ENST00000615088 EIF4G3O43432 1585 aaKnown RBP22.73■■□□□ 1.23
AL109954.3-201ENST00000615088 TARBP1Q13395 1621 aaKnown RBP22.73■■□□□ 1.23
AL109954.3-201ENST00000615088 SOGA1O94964 1423 aa22.71■■□□□ 1.23
AL109954.3-201ENST00000615088 AQRO60306 1485 aaKnown RBP eCLIP22.69■■□□□ 1.22
AL109954.3-201ENST00000615088 FGD5Q6ZNL6 1462 aa22.68■■□□□ 1.22
AL109954.3-201ENST00000615088 CUX1P39880 1505 aa22.67■■□□□ 1.22
AL109954.3-201ENST00000615088 RAD54L2Q9Y4B4 1467 aa22.67■■□□□ 1.22
AL109954.3-201ENST00000615088 TRIM41Q8WV44 630 aa22.61■■□□□ 1.21
AL109954.3-201ENST00000615088 TDRD9Q8NDG6 1382 aaKnown RBP22.61■■□□□ 1.21
AL109954.3-201ENST00000615088 WDR97A6NE52 1622 aa22.58■■□□□ 1.21
AL109954.3-201ENST00000615088 FBLN2P98095 1184 aa22.55■■□□□ 1.2
AL109954.3-201ENST00000615088 CHD1O14646 1710 aa22.48■■□□□ 1.19
AL109954.3-201ENST00000615088 GRIN2BQ13224 1484 aa22.48■■□□□ 1.19
AL109954.3-201ENST00000615088 SNAPC4Q5SXM2 1469 aa22.48■■□□□ 1.19
AL109954.3-201ENST00000615088 WRNQ14191 1432 aaPredicted RBP eCLIP22.46■■□□□ 1.19
AL109954.3-201ENST00000615088 MAGI1Q96QZ7 1491 aaPredicted RBP22.45■■□□□ 1.18
AL109954.3-201ENST00000615088 ABCA10Q8WWZ4 1543 aa22.44■■□□□ 1.18
AL109954.3-201ENST00000615088 GAPVD1Q14C86 1478 aa22.43■■□□□ 1.18
AL109954.3-201ENST00000615088 CHMP7Q8WUX9 453 aaPredicted RBP22.43■■□□□ 1.18
AL109954.3-201ENST00000615088 RIMBP3CA6NJZ7 1639 aa22.42■■□□□ 1.18
AL109954.3-201ENST00000615088 RIMBP3BA6NNM3 1639 aa22.42■■□□□ 1.18
AL109954.3-201ENST00000615088 RIMBP3Q9UFD9 1639 aa22.42■■□□□ 1.18
AL109954.3-201ENST00000615088 TOP2BQ02880 1626 aa22.4■■□□□ 1.18
AL109954.3-201ENST00000615088 ARHGEF11O15085 1522 aa22.4■■□□□ 1.18
AL109954.3-201ENST00000615088 BIVM-ERCC5R4GMW8 1640 aa22.39■■□□□ 1.17
AL109954.3-201ENST00000615088 SYNJ1O43426 1573 aa22.37■■□□□ 1.17
AL109954.3-201ENST00000615088 SYNJ2O15056 1496 aa22.36■■□□□ 1.17
AL109954.3-201ENST00000615088 ABCA5Q8WWZ7 1642 aa22.35■■□□□ 1.17
AL109954.3-201ENST00000615088 PBRM1Q86U86 1689 aa22.35■■□□□ 1.17
AL109954.3-201ENST00000615088 CLASP1Q7Z460 1538 aa22.26■■□□□ 1.15
AL109954.3-201ENST00000615088 CYB5RLQ6IPT4 315 aa22.25■■□□□ 1.15
AL109954.3-201ENST00000615088 ARAP1Q96P48 1450 aa22.19■■□□□ 1.14
AL109954.3-201ENST00000615088 ADAMTS12P58397 1594 aa22.18■■□□□ 1.14
AL109954.3-201ENST00000615088 ERICH3Q5RHP9 1530 aa22.17■■□□□ 1.14
AL109954.3-201ENST00000615088 GRIN2AQ12879 1464 aa22.17■■□□□ 1.14
AL109954.3-201ENST00000615088 FHAD1B1AJZ9 1412 aa22.17■■□□□ 1.14
AL109954.3-201ENST00000615088 NUP160Q12769 1436 aa22.08■■□□□ 1.13
AL109954.3-201ENST00000615088 CEP170Q5SW79 1584 aa22.05■■□□□ 1.12
AL109954.3-201ENST00000615088 KIF27Q86VH2 1401 aa22.03■■□□□ 1.12
AL109954.3-201ENST00000615088 TRHP20396 242 aaPredicted RBP21.95■■□□□ 1.1
AL109954.3-201ENST00000615088 IGF1RP08069 1367 aa21.94■■□□□ 1.1
AL109954.3-201ENST00000615088 SHROOM2Q13796 1616 aa21.91■■□□□ 1.1
AL109954.3-201ENST00000615088 ERCC6L2Q5T890 1561 aa21.91■■□□□ 1.1
AL109954.3-201ENST00000615088 CUL7Q14999 1698 aa21.9■■□□□ 1.1
AL109954.3-201ENST00000615088 JPH4Q96JJ6 628 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms