RNA–Protein interactions for RNA: ENST00000589056.5

PIK3C3-210, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 2 BASIC

Gene PIK3C3, Length 2,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-210ENST00000589056 NISCHQ9Y2I1 1504 aa29■■■□□ 2.23
PIK3C3-210ENST00000589056 CCDC180Q9P1Z9 1646 aa25.46■■□□□ 1.67
PIK3C3-210ENST00000589056 ABCC9O60706 1549 aa24.39■■□□□ 1.49
PIK3C3-210ENST00000589056 ZCCHC6Q5VYS8 1495 aaKnown RBP24.29■■□□□ 1.48
PIK3C3-210ENST00000589056 DCAF8L2P0C7V8 631 aa24.15■■□□□ 1.46
PIK3C3-210ENST00000589056 DCAF1Q9Y4B6 1507 aa23.93■■□□□ 1.42
PIK3C3-210ENST00000589056 NACADO15069 1562 aa23.76■■□□□ 1.39
PIK3C3-210ENST00000589056 MYO15BQ96JP2 1530 aa23.74■■□□□ 1.39
PIK3C3-210ENST00000589056 RB1CC1Q8TDY2 1594 aa23.66■■□□□ 1.38
PIK3C3-210ENST00000589056 SHROOM4Q9ULL8 1493 aa23.53■■□□□ 1.36
PIK3C3-210ENST00000589056 SCRIBQ14160 1630 aa23.43■■□□□ 1.34
PIK3C3-210ENST00000589056 UNC13AQ9UPW8 1703 aa23.25■■□□□ 1.31
PIK3C3-210ENST00000589056 BICRAQ9NZM4 1560 aa22.93■■□□□ 1.26
PIK3C3-210ENST00000589056 PABPN1Q86U42 306 aaKnown RBP eCLIP22.93■■□□□ 1.26
PIK3C3-210ENST00000589056 CECR2Q9BXF3 1484 aa22.57■■□□□ 1.2
PIK3C3-210ENST00000589056 SUPT5HO00267 1087 aaKnown RBP22.47■■□□□ 1.19
PIK3C3-210ENST00000589056 BAZ1AQ9NRL2 1556 aaPredicted RBP22.43■■□□□ 1.18
PIK3C3-210ENST00000589056 MROH2BQ7Z745 1585 aa22.41■■□□□ 1.18
PIK3C3-210ENST00000589056 SMARCA4P51532 1647 aa22.39■■□□□ 1.18
PIK3C3-210ENST00000589056 RSF1Q96T23 1441 aaPredicted RBP22.37■■□□□ 1.17
PIK3C3-210ENST00000589056 EIF4G1Q04637 1599 aaKnown RBP22.29■■□□□ 1.16
PIK3C3-210ENST00000589056 WIZO95785 1651 aa22.26■■□□□ 1.15
PIK3C3-210ENST00000589056 PEG3Q9GZU2 1588 aa22.08■■□□□ 1.12
PIK3C3-210ENST00000589056 ATAD2BQ9ULI0 1458 aa22.06■■□□□ 1.12
PIK3C3-210ENST00000589056 SMARCA2P51531 1590 aa22.06■■□□□ 1.12
PIK3C3-210ENST00000589056 CC2D2AQ9P2K1 1620 aa22.06■■□□□ 1.12
PIK3C3-210ENST00000589056 TOP2AP11388 1531 aaKnown RBP21.97■■□□□ 1.11
PIK3C3-210ENST00000589056 BAZ1BQ9UIG0 1483 aaKnown RBP21.96■■□□□ 1.11
PIK3C3-210ENST00000589056 NCAPD3P42695 1498 aa21.9■■□□□ 1.1
PIK3C3-210ENST00000589056 HMGXB3Q12766 1538 aa21.87■■□□□ 1.09
PIK3C3-210ENST00000589056 CCDC88BA6NC98 1476 aa21.73■■□□□ 1.07
PIK3C3-210ENST00000589056 DNAJC5BQ9UF47 199 aa21.73■■□□□ 1.07
PIK3C3-210ENST00000589056 CFTRP13569 1480 aa21.35■■□□□ 1.01
PIK3C3-210ENST00000589056 CADPSQ9ULU8 1353 aa21.34■■□□□ 1.01
PIK3C3-210ENST00000589056 PRDM2Q13029 1718 aa21.32■■□□□ 1
PIK3C3-210ENST00000589056 NESP48681 1621 aa21.3■■□□□ 1
PIK3C3-210ENST00000589056 CHIC1Q5VXU3 224 aa21.27■■□□□ 1
PIK3C3-210ENST00000589056 LAMC3Q9Y6N6 1575 aa21.26■□□□□ 0.99
PIK3C3-210ENST00000589056 ABCC8Q09428 1581 aa21.24■□□□□ 0.99
PIK3C3-210ENST00000589056 FANCD2Q9BXW9 1451 aa21.13■□□□□ 0.97
PIK3C3-210ENST00000589056 TRIM41Q8WV44 630 aa21.13■□□□□ 0.97
PIK3C3-210ENST00000589056 KIF21AQ7Z4S6 1674 aa21.1■□□□□ 0.97
PIK3C3-210ENST00000589056 WRNQ14191 1432 aaPredicted RBP eCLIP21.09■□□□□ 0.97
PIK3C3-210ENST00000589056 PDS5BQ9NTI5 1447 aa21.09■□□□□ 0.97
PIK3C3-210ENST00000589056 CEP164Q9UPV0 1460 aa21.04■□□□□ 0.96
PIK3C3-210ENST00000589056 SYNJ1O43426 1573 aa21.04■□□□□ 0.96
PIK3C3-210ENST00000589056 CUX1P39880 1505 aa20.98■□□□□ 0.95
PIK3C3-210ENST00000589056 TOP2BQ02880 1626 aa20.96■□□□□ 0.95
PIK3C3-210ENST00000589056 ERCC6Q03468 1493 aa20.96■□□□□ 0.95
PIK3C3-210ENST00000589056 BIVM-ERCC5R4GMW8 1640 aa20.95■□□□□ 0.94
PIK3C3-210ENST00000589056 DNMBPQ6XZF7 1577 aa20.89■□□□□ 0.93
PIK3C3-210ENST00000589056 URB2Q14146 1524 aaKnown RBP20.88■□□□□ 0.93
PIK3C3-210ENST00000589056 TOPBP1Q92547 1522 aa20.87■□□□□ 0.93
PIK3C3-210ENST00000589056 MRC2Q9UBG0 1479 aa20.84■□□□□ 0.93
PIK3C3-210ENST00000589056 FGD5Q6ZNL6 1462 aa20.8■□□□□ 0.92
PIK3C3-210ENST00000589056 THOC2Q8NI27 1593 aaKnown RBP20.78■□□□□ 0.92
PIK3C3-210ENST00000589056 FAM9AQ8IZU1 332 aaPredicted RBP20.77■□□□□ 0.92
PIK3C3-210ENST00000589056 POLA1P09884 1462 aaPredicted RBP20.75■□□□□ 0.91
PIK3C3-210ENST00000589056 WDR62O43379 1518 aa20.74■□□□□ 0.91
PIK3C3-210ENST00000589056 SOGA1O94964 1423 aa20.73■□□□□ 0.91
PIK3C3-210ENST00000589056 RUSC2Q8N2Y8 1516 aa20.68■□□□□ 0.9
PIK3C3-210ENST00000589056 RAD54L2Q9Y4B4 1467 aa20.68■□□□□ 0.9
PIK3C3-210ENST00000589056 CUX2O14529 1486 aa20.62■□□□□ 0.89
PIK3C3-210ENST00000589056 WDR97A6NE52 1622 aa20.6■□□□□ 0.89
PIK3C3-210ENST00000589056 TARBP1Q13395 1621 aaKnown RBP20.59■□□□□ 0.89
PIK3C3-210ENST00000589056 EEA1Q15075 1411 aa20.58■□□□□ 0.89
PIK3C3-210ENST00000589056 KIF27Q86VH2 1401 aa20.58■□□□□ 0.89
PIK3C3-210ENST00000589056 ABCA10Q8WWZ4 1543 aa20.58■□□□□ 0.89
PIK3C3-210ENST00000589056 EHMT2Q96KQ7 1210 aa20.55■□□□□ 0.88
PIK3C3-210ENST00000589056 IFT140Q96RY7 1462 aa20.53■□□□□ 0.88
PIK3C3-210ENST00000589056 CSRNP3Q8WYN3 585 aa20.52■□□□□ 0.88
PIK3C3-210ENST00000589056 TDRD9Q8NDG6 1382 aaKnown RBP20.51■□□□□ 0.87
PIK3C3-210ENST00000589056 LOC105371045A0A1W2PR82 267 aa20.49■□□□□ 0.87
PIK3C3-210ENST00000589056 ABCA5Q8WWZ7 1642 aa20.47■□□□□ 0.87
PIK3C3-210ENST00000589056 ZNF608Q9ULD9 1512 aaPredicted RBP20.46■□□□□ 0.87
PIK3C3-210ENST00000589056 GAPVD1Q14C86 1478 aa20.44■□□□□ 0.86
PIK3C3-210ENST00000589056 AQRO60306 1485 aaKnown RBP eCLIP20.43■□□□□ 0.86
PIK3C3-210ENST00000589056 PBRM1Q86U86 1689 aa20.42■□□□□ 0.86
PIK3C3-210ENST00000589056 EIF4G3O43432 1585 aaKnown RBP20.41■□□□□ 0.86
PIK3C3-210ENST00000589056 IGF1RP08069 1367 aa20.4■□□□□ 0.86
PIK3C3-210ENST00000589056 KIF21BO75037 1637 aa20.37■□□□□ 0.85
PIK3C3-210ENST00000589056 ERICH3Q5RHP9 1530 aa20.35■□□□□ 0.85
PIK3C3-210ENST00000589056 GOLGA3Q08378 1498 aa20.33■□□□□ 0.85
PIK3C3-210ENST00000589056 PRXQ9BXM0 1461 aa20.33■□□□□ 0.85
PIK3C3-210ENST00000589056 RAPGEF2Q9Y4G8 1499 aa20.33■□□□□ 0.85
PIK3C3-210ENST00000589056 CUL7Q14999 1698 aa20.33■□□□□ 0.84
PIK3C3-210ENST00000589056 GRIN2BQ13224 1484 aa20.32■□□□□ 0.84
PIK3C3-210ENST00000589056 CARMIL1Q5VZK9 1371 aa20.31■□□□□ 0.84
PIK3C3-210ENST00000589056 UBTFP17480 764 aaKnown RBP20.3■□□□□ 0.84
PIK3C3-210ENST00000589056 SNAPC4Q5SXM2 1469 aa20.25■□□□□ 0.83
PIK3C3-210ENST00000589056 ADAMTS12P58397 1594 aa20.24■□□□□ 0.83
PIK3C3-210ENST00000589056 FHAD1B1AJZ9 1412 aa20.19■□□□□ 0.82
PIK3C3-210ENST00000589056 MAGI1Q96QZ7 1491 aaPredicted RBP20.18■□□□□ 0.82
PIK3C3-210ENST00000589056 TNIKQ9UKE5 1360 aa20.16■□□□□ 0.82
PIK3C3-210ENST00000589056 FBLN2P98095 1184 aa20.14■□□□□ 0.81
PIK3C3-210ENST00000589056 RANGAP1P46060 587 aaPredicted RBP20.13■□□□□ 0.81
PIK3C3-210ENST00000589056 SYNJ2O15056 1496 aa20.11■□□□□ 0.81
PIK3C3-210ENST00000589056 CTTNBP2Q8WZ74 1663 aa20.11■□□□□ 0.81
PIK3C3-210ENST00000589056 CHMP7Q8WUX9 453 aaPredicted RBP20.11■□□□□ 0.81
PIK3C3-210ENST00000589056 CEP162Q5TB80 1403 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms