Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHB11Q9Y5F2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHB11Q9Y5F2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB11Q9Y5F2 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDHB11Q9Y5F2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB11Q9Y5F2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB11Q9Y5F2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
PCDHB11Q9Y5F2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB11Q9Y5F2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.43■■□□□ 1.02
PCDHB11Q9Y5F2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHB11Q9Y5F2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
PCDHB11Q9Y5F2 AC034268.1-201ENST00000441047 882 ntBASIC21.43■■□□□ 1.02
PCDHB11Q9Y5F2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.43■■□□□ 1.02
PCDHB11Q9Y5F2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB11Q9Y5F2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB11Q9Y5F2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB11Q9Y5F2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB11Q9Y5F2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB11Q9Y5F2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB11Q9Y5F2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB11Q9Y5F2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB11Q9Y5F2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB11Q9Y5F2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDHB11Q9Y5F2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB11Q9Y5F2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDHB11Q9Y5F2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.42■■□□□ 1.02
PCDHB11Q9Y5F2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDHB11Q9Y5F2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.42■■□□□ 1.02
PCDHB11Q9Y5F2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
PCDHB11Q9Y5F2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB11Q9Y5F2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB11Q9Y5F2 AC133637.1-201ENST00000624115 1537 ntBASIC21.41■■□□□ 1.02
PCDHB11Q9Y5F2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
PCDHB11Q9Y5F2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB11Q9Y5F2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHB11Q9Y5F2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHB11Q9Y5F2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHB11Q9Y5F2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PCDHB11Q9Y5F2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB11Q9Y5F2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB11Q9Y5F2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDHB11Q9Y5F2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB11Q9Y5F2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHB11Q9Y5F2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHB11Q9Y5F2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB11Q9Y5F2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB11Q9Y5F2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
PCDHB11Q9Y5F2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB11Q9Y5F2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB11Q9Y5F2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.39■■□□□ 1.02
PCDHB11Q9Y5F2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
PCDHB11Q9Y5F2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHB11Q9Y5F2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB11Q9Y5F2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB11Q9Y5F2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDHB11Q9Y5F2 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.39■■□□□ 1.01
PCDHB11Q9Y5F2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.39■■□□□ 1.01
PCDHB11Q9Y5F2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDHB11Q9Y5F2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB11Q9Y5F2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDHB11Q9Y5F2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
PCDHB11Q9Y5F2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB11Q9Y5F2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB11Q9Y5F2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB11Q9Y5F2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB11Q9Y5F2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB11Q9Y5F2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
PCDHB11Q9Y5F2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PCDHB11Q9Y5F2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
PCDHB11Q9Y5F2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHB11Q9Y5F2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB11Q9Y5F2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHB11Q9Y5F2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
PCDHB11Q9Y5F2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB11Q9Y5F2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
PCDHB11Q9Y5F2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB11Q9Y5F2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB11Q9Y5F2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
PCDHB11Q9Y5F2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.37■■□□□ 1.01
PCDHB11Q9Y5F2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.37■■□□□ 1.01
PCDHB11Q9Y5F2 AL137784.2-201ENST00000607332 1000 ntBASIC21.37■■□□□ 1.01
PCDHB11Q9Y5F2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB11Q9Y5F2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB11Q9Y5F2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHB11Q9Y5F2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHB11Q9Y5F2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB11Q9Y5F2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB11Q9Y5F2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHB11Q9Y5F2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHB11Q9Y5F2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB11Q9Y5F2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB11Q9Y5F2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PCDHB11Q9Y5F2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHB11Q9Y5F2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHB11Q9Y5F2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB11Q9Y5F2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.36■■□□□ 1.01
PCDHB11Q9Y5F2 AC004687.1-201ENST00000579003 1625 ntBASIC21.36■■□□□ 1.01
PCDHB11Q9Y5F2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB11Q9Y5F2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PCDHB11Q9Y5F2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms