Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.2■■□□□ 1.3
RNF135Q8IUD6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
RNF135Q8IUD6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.2■■□□□ 1.3
RNF135Q8IUD6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.2■■□□□ 1.3
RNF135Q8IUD6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.2■■□□□ 1.3
RNF135Q8IUD6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.2■■□□□ 1.3
RNF135Q8IUD6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF135Q8IUD6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RNF135Q8IUD6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.19■■□□□ 1.3
RNF135Q8IUD6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.19■■□□□ 1.3
RNF135Q8IUD6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
RNF135Q8IUD6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
RNF135Q8IUD6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
RNF135Q8IUD6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.19■■□□□ 1.3
RNF135Q8IUD6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RNF135Q8IUD6 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.19■■□□□ 1.3
RNF135Q8IUD6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.19■■□□□ 1.3
RNF135Q8IUD6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.19■■□□□ 1.3
RNF135Q8IUD6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RNF135Q8IUD6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
RNF135Q8IUD6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.19■■□□□ 1.3
RNF135Q8IUD6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.19■■□□□ 1.3
RNF135Q8IUD6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RNF135Q8IUD6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.19■■□□□ 1.3
RNF135Q8IUD6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.19■■□□□ 1.3
RNF135Q8IUD6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF135Q8IUD6 ABCB10P4-201ENST00000566803 2184 ntBASIC23.18■■□□□ 1.3
RNF135Q8IUD6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF135Q8IUD6 AP004607.4-201ENST00000530158 1459 ntBASIC23.18■■□□□ 1.3
RNF135Q8IUD6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF135Q8IUD6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF135Q8IUD6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RNF135Q8IUD6 MIR663A-201ENST00000385250 93 ntBASIC23.18■■□□□ 1.3
RNF135Q8IUD6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RNF135Q8IUD6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
RNF135Q8IUD6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RNF135Q8IUD6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.17■■□□□ 1.3
RNF135Q8IUD6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF135Q8IUD6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF135Q8IUD6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF135Q8IUD6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.17■■□□□ 1.3
RNF135Q8IUD6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.17■■□□□ 1.3
RNF135Q8IUD6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.17■■□□□ 1.3
RNF135Q8IUD6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.17■■□□□ 1.3
RNF135Q8IUD6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RNF135Q8IUD6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
RNF135Q8IUD6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF135Q8IUD6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
RNF135Q8IUD6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RNF135Q8IUD6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF135Q8IUD6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RNF135Q8IUD6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.16■■□□□ 1.3
RNF135Q8IUD6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.16■■□□□ 1.3
RNF135Q8IUD6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.16■■□□□ 1.3
RNF135Q8IUD6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF135Q8IUD6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF135Q8IUD6 AC004854.2-201ENST00000608450 1441 ntBASIC23.16■■□□□ 1.3
RNF135Q8IUD6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF135Q8IUD6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF135Q8IUD6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RNF135Q8IUD6 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RNF135Q8IUD6 OR2I1P-207ENST00000453522 948 ntBASIC23.15■■□□□ 1.3
RNF135Q8IUD6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF135Q8IUD6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RNF135Q8IUD6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF135Q8IUD6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RNF135Q8IUD6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RNF135Q8IUD6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
RNF135Q8IUD6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RNF135Q8IUD6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
RNF135Q8IUD6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
RNF135Q8IUD6 ALDH1A3-203ENST00000557963 1670 ntBASIC23.14■■□□□ 1.29
RNF135Q8IUD6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.14■■□□□ 1.29
RNF135Q8IUD6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RNF135Q8IUD6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RNF135Q8IUD6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC23.14■■□□□ 1.29
RNF135Q8IUD6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
RNF135Q8IUD6 AC142086.2-201ENST00000569753 217 ntBASIC23.14■■□□□ 1.29
RNF135Q8IUD6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.14■■□□□ 1.29
RNF135Q8IUD6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
RNF135Q8IUD6 AL161729.1-201ENST00000604104 1402 ntBASIC23.14■■□□□ 1.29
RNF135Q8IUD6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
RNF135Q8IUD6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RNF135Q8IUD6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RNF135Q8IUD6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF135Q8IUD6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF135Q8IUD6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RNF135Q8IUD6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RNF135Q8IUD6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF135Q8IUD6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.13■■□□□ 1.29
RNF135Q8IUD6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.13■■□□□ 1.29
RNF135Q8IUD6 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RNF135Q8IUD6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF135Q8IUD6 KRT18P6-201ENST00000555540 1265 ntBASIC23.13■■□□□ 1.29
RNF135Q8IUD6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.13■■□□□ 1.29
RNF135Q8IUD6 AC011767.1-201ENST00000617410 1153 ntBASIC23.13■■□□□ 1.29
RNF135Q8IUD6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.13■■□□□ 1.29
RNF135Q8IUD6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.13■■□□□ 1.29
RNF135Q8IUD6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF135Q8IUD6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms