Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 ACSL5-205ENST00000433418 3281 ntTSL 5 BASIC10.77□□□□□ -0.695e-7■■■■□ 21.7
SND1Q7KZF4 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.015e-7■■■■□ 21.7
SND1Q7KZF4 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC8.58□□□□□ -1.045e-7■■■■□ 21.7
SND1Q7KZF4 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.325e-7■■■■□ 21.7
SND1Q7KZF4 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.395e-7■■■■□ 21.7
SND1Q7KZF4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.79■■□□□ 1.249e-12■■■■□ 21.7
SND1Q7KZF4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.445e-14■■■■□ 21.7
SND1Q7KZF4 CLU-202ENST00000405140 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.325e-14■■■■□ 21.7
SND1Q7KZF4 CLU-201ENST00000316403 3080 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.385e-14■■■■□ 21.7
SND1Q7KZF4 CLU-211ENST00000522299 2807 ntTSL 212.01□□□□□ -0.495e-14■■■■□ 21.7
SND1Q7KZF4 CD151-209ENST00000526439 713 ntTSL 211.46□□□□□ -0.575e-14■■■■□ 21.7
SND1Q7KZF4 DNAJB11-204ENST00000495390 4079 ntTSL 27.77□□□□□ -1.171e-10■■■■□ 21.7
SND1Q7KZF4 FCGR2A-208ENST00000473080 587 ntTSL 212.93□□□□□ -0.348e-7■■■■□ 21.7
SND1Q7KZF4 CLSTN3-216ENST00000545663 533 ntTSL 416.03■□□□□ 0.161e-8■■■■□ 21.7
SND1Q7KZF4 CLSTN3-213ENST00000541953 570 ntTSL 515.95■□□□□ 0.141e-8■■■■□ 21.7
SND1Q7KZF4 CLSTN3-205ENST00000535452 533 ntTSL 413.72□□□□□ -0.211e-8■■■■□ 21.7
SND1Q7KZF4 CLSTN3-209ENST00000539982 570 ntTSL 412.08□□□□□ -0.481e-8■■■■□ 21.7
SND1Q7KZF4 CLSTN3-203ENST00000534830 547 ntTSL 410.33□□□□□ -0.761e-8■■■■□ 21.7
SND1Q7KZF4 SLC39A4-208ENST00000531789 361 ntTSL 313.04□□□□□ -0.324e-10■■■■□ 21.7
SND1Q7KZF4 APLP2-220ENST00000533618 574 ntTSL 421.54■■□□□ 1.041e-10■■■■□ 21.7
SND1Q7KZF4 APLP2-221ENST00000533713 560 ntTSL 421.54■■□□□ 1.041e-10■■■■□ 21.7
SND1Q7KZF4 APLP2-211ENST00000529235 537 ntTSL 415.21■□□□□ 0.031e-10■■■■□ 21.7
SND1Q7KZF4 APLP2-212ENST00000529483 323 ntTSL 56.12□□□□□ -1.431e-10■■■■□ 21.7
SND1Q7KZF4 STT3A-206ENST00000526213 555 ntTSL 29.82□□□□□ -0.841e-18■■■■□ 21.7
SND1Q7KZF4 STT3A-209ENST00000527456 481 ntTSL 55.07□□□□□ -1.61e-18■■■■□ 21.7
SND1Q7KZF4 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC8.5□□□□□ -1.057e-7■■■■□ 21.7
SND1Q7KZF4 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.077e-7■■■■□ 21.7
SND1Q7KZF4 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.087e-7■■■■□ 21.7
SND1Q7KZF4 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.167e-7■■■■□ 21.7
SND1Q7KZF4 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.8□□□□□ -1.167e-7■■■■□ 21.7
SND1Q7KZF4 CTSB-233ENST00000534636 633 ntTSL 419.05■□□□□ 0.641e-27■■■■□ 21.7
SND1Q7KZF4 MARCH6-209ENST00000510872 577 ntTSL 412.58□□□□□ -0.41e-8■■■■□ 21.7
SND1Q7KZF4 MARCH6-206ENST00000506131 311 ntTSL 511.81□□□□□ -0.521e-8■■■■□ 21.7
SND1Q7KZF4 MARCH6-207ENST00000507863 582 ntTSL 48.16□□□□□ -1.11e-8■■■■□ 21.7
SND1Q7KZF4 HLA-C-205ENST00000466892 754 nt17.02■□□□□ 0.322e-13■■■■□ 21.7
SND1Q7KZF4 FGL1-211ENST00000523097 913 ntTSL 27.97□□□□□ -1.134e-20■■■■□ 21.7
SND1Q7KZF4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.91■□□□□ 0.947e-8■■■■□ 21.7
SND1Q7KZF4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.952e-7■■■■□ 21.7
SND1Q7KZF4 LAMP1-203ENST00000472564 5242 ntTSL 219.17■□□□□ 0.662e-7■■■■□ 21.7
SND1Q7KZF4 SPOCK2-204ENST00000460053 812 ntTSL 517.23■□□□□ 0.355e-7■■■■□ 21.6
SND1Q7KZF4 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.243e-17■■■■□ 21.6
SND1Q7KZF4 ASGR2-202ENST00000355035 1386 ntTSL 1 (best) BASIC13.56□□□□□ -0.243e-17■■■■□ 21.6
SND1Q7KZF4 TXNDC5-205ENST00000475802 582 ntTSL 212.31□□□□□ -0.444e-10■■■■□ 21.6
SND1Q7KZF4 TXNDC5-202ENST00000460138 2704 ntTSL 211.84□□□□□ -0.514e-10■■■■□ 21.6
SND1Q7KZF4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.78■□□□□ 0.286e-7■■■■□ 21.6
SND1Q7KZF4 SEC24D-208ENST00000506622 1319 ntTSL 215.05■□□□□ -06e-7■■■■□ 21.6
SND1Q7KZF4 SEC24D-209ENST00000509818 1870 ntTSL 1 (best)9.6□□□□□ -0.876e-7■■■■□ 21.6
SND1Q7KZF4 CTH-205ENST00000482383 598 ntTSL 28.32□□□□□ -1.083e-7■■■■□ 21.6
SND1Q7KZF4 SEC24D-214ENST00000514561 3806 ntTSL 1 (best)5.51□□□□□ -1.536e-7■■■■□ 21.6
SND1Q7KZF4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.23■□□□□ 0.993e-12■■■■□ 21.6
SND1Q7KZF4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.88■□□□□ 0.773e-12■■■■□ 21.6
SND1Q7KZF4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.62■□□□□ 0.733e-12■■■■□ 21.6
SND1Q7KZF4 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC15.33■□□□□ 0.043e-12■■■■□ 21.6
SND1Q7KZF4 RTN4-211ENST00000438462 656 ntTSL 511.63□□□□□ -0.553e-12■■■■□ 21.6
SND1Q7KZF4 RTN4-214ENST00000486085 955 ntTSL 310.66□□□□□ -0.73e-12■■■■□ 21.6
SND1Q7KZF4 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC10□□□□□ -0.813e-12■■■■□ 21.6
SND1Q7KZF4 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.64□□□□□ -1.193e-12■■■■□ 21.6
SND1Q7KZF4 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.253e-12■■■■□ 21.6
SND1Q7KZF4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.23□□□□□ -1.733e-12■■■■□ 21.6
SND1Q7KZF4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.86□□□□□ -1.793e-12■■■■□ 21.6
SND1Q7KZF4 CLU-207ENST00000520796 737 ntTSL 519.25■□□□□ 0.671e-13■■■■□ 21.6
SND1Q7KZF4 TPP1-211ENST00000528917 559 ntTSL 410.15□□□□□ -0.782e-9■■■■□ 21.6
SND1Q7KZF4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17■□□□□ 0.318e-9■■■■□ 21.6
SND1Q7KZF4 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.01□□□□□ -0.018e-9■■■■□ 21.6
SND1Q7KZF4 CYB561A3-217ENST00000542361 650 ntTSL 314.88□□□□□ -0.038e-9■■■■□ 21.6
SND1Q7KZF4 CYB561A3-216ENST00000540755 1494 ntTSL 1 (best)14.8□□□□□ -0.048e-9■■■■□ 21.6
SND1Q7KZF4 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.28e-9■■■■□ 21.6
SND1Q7KZF4 CYB561A3-214ENST00000540139 1202 ntTSL 313.12□□□□□ -0.318e-9■■■■□ 21.6
SND1Q7KZF4 CYB561A3-213ENST00000539890 572 ntTSL 4 BASIC13.07□□□□□ -0.328e-9■■■■□ 21.6
SND1Q7KZF4 CYB561A3-215ENST00000540317 1557 ntTSL 312.59□□□□□ -0.398e-9■■■■□ 21.6
SND1Q7KZF4 CYB561A3-201ENST00000294072 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.548e-9■■■■□ 21.6
SND1Q7KZF4 CYB561A3-202ENST00000426130 3205 ntTSL 5 BASIC11.41□□□□□ -0.588e-9■■■■□ 21.6
SND1Q7KZF4 CYB561A3-221ENST00000546151 3986 ntTSL 3 BASIC10.26□□□□□ -0.778e-9■■■■□ 21.6
SND1Q7KZF4 PNPLA6-211ENST00000595264 800 ntTSL 316.18■□□□□ 0.189e-7■■■■□ 21.6
SND1Q7KZF4 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC16.09■□□□□ 0.179e-7■■■■□ 21.6
SND1Q7KZF4 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.079e-7■■■■□ 21.6
SND1Q7KZF4 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC14.29□□□□□ -0.129e-7■■■■□ 21.6
SND1Q7KZF4 PNPLA6-220ENST00000600737 4195 ntTSL 1 (best) BASIC13.83□□□□□ -0.199e-7■■■■□ 21.6
SND1Q7KZF4 PNPLA6-203ENST00000450331 4457 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.239e-7■■■■□ 21.6
SND1Q7KZF4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.015e-7■■■■□ 21.6
SND1Q7KZF4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.385e-7■■■■□ 21.6
SND1Q7KZF4 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.035e-7■■■■□ 21.6
SND1Q7KZF4 FAM178B-205ENST00000494172 592 ntTSL 318.63■□□□□ 0.577e-14■■■■□ 21.6
SND1Q7KZF4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.874e-7■■■■□ 21.6
SND1Q7KZF4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.8■□□□□ 0.924e-7■■■■□ 21.6
SND1Q7KZF4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.21■□□□□ 0.514e-7■■■■□ 21.6
SND1Q7KZF4 CADM1-202ENST00000441886 543 ntTSL 510.06□□□□□ -0.87e-9■■■■□ 21.6
SND1Q7KZF4 ITGA5-211ENST00000552564 4996 ntTSL 215.6■□□□□ 0.092e-6■■■■□ 21.6
SND1Q7KZF4 DLK1-205ENST00000556051 469 ntTSL 2 BASIC14.13□□□□□ -0.152e-19■■■■□ 21.5
SND1Q7KZF4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.17■□□□□ 0.58e-13■■■■□ 21.5
SND1Q7KZF4 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.338e-13■■■■□ 21.5
SND1Q7KZF4 CALU-201ENST00000249364 3357 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.48e-13■■■■□ 21.5
SND1Q7KZF4 CALU-206ENST00000542996 4225 ntTSL 1 (best) BASIC11.67□□□□□ -0.548e-13■■■■□ 21.5
SND1Q7KZF4 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC9.64□□□□□ -0.878e-13■■■■□ 21.5
SND1Q7KZF4 SEZ6L2-203ENST00000350527 3173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.33e-8■■■■□ 21.5
SND1Q7KZF4 SEZ6L2-202ENST00000346932 3015 ntTSL 1 (best) BASIC11.92□□□□□ -0.53e-8■■■■□ 21.5
SND1Q7KZF4 SEZ6L2-209ENST00000617533 3555 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.533e-8■■■■□ 21.5
SND1Q7KZF4 SEZ6L2-204ENST00000537485 3423 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.583e-8■■■■□ 21.5
SND1Q7KZF4 SEZ6L2-201ENST00000308713 3801 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.723e-8■■■■□ 21.5
SND1Q7KZF4 ANPEP-207ENST00000560028 582 ntTSL 312.32□□□□□ -0.445e-9■■■■□ 21.5
Retrieved 100 of 13,567 protein–RNA pairs in 91.7 ms