RNA–Protein interactions for RNA: ENST00000460053.1

SPOCK2-204, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2, humanhuman

TSL 5

Gene SPOCK2, Length 812 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK2-204ENST00000460053 NISCHQ9Y2I1 1504 aa40.32■■■■■ 4.04
SPOCK2-204ENST00000460053 CCDC180Q9P1Z9 1646 aa35.79■■■■□ 3.32
SPOCK2-204ENST00000460053 ABCC9O60706 1549 aa35.15■■■■□ 3.22
SPOCK2-204ENST00000460053 DCAF8L2P0C7V8 631 aa33.85■■■■□ 3.01
SPOCK2-204ENST00000460053 RB1CC1Q8TDY2 1594 aa33.76■■■□□ 2.99
SPOCK2-204ENST00000460053 NACADO15069 1562 aa33.71■■■□□ 2.99
SPOCK2-204ENST00000460053 ZCCHC6Q5VYS8 1495 aaKnown RBP33.54■■■□□ 2.96
SPOCK2-204ENST00000460053 MYO15BQ96JP2 1530 aa33.47■■■□□ 2.95
SPOCK2-204ENST00000460053 DCAF1Q9Y4B6 1507 aa33.32■■■□□ 2.92
SPOCK2-204ENST00000460053 UNC13AQ9UPW8 1703 aa32.96■■■□□ 2.87
SPOCK2-204ENST00000460053 PABPN1Q86U42 306 aaKnown RBP eCLIP32.9■■■□□ 2.86
SPOCK2-204ENST00000460053 DNAJC5BQ9UF47 199 aa32.78■■■□□ 2.84
SPOCK2-204ENST00000460053 BICRAQ9NZM4 1560 aa32.72■■■□□ 2.83
SPOCK2-204ENST00000460053 SCRIBQ14160 1630 aa32.7■■■□□ 2.83
SPOCK2-204ENST00000460053 SHROOM4Q9ULL8 1493 aa32.33■■■□□ 2.77
SPOCK2-204ENST00000460053 EIF4G1Q04637 1599 aaKnown RBP31.87■■■□□ 2.69
SPOCK2-204ENST00000460053 CC2D2AQ9P2K1 1620 aa31.76■■■□□ 2.67
SPOCK2-204ENST00000460053 CECR2Q9BXF3 1484 aa31.57■■■□□ 2.64
SPOCK2-204ENST00000460053 SMARCA4P51532 1647 aa31.27■■■□□ 2.6
SPOCK2-204ENST00000460053 BAZ1AQ9NRL2 1556 aaPredicted RBP31.23■■■□□ 2.59
SPOCK2-204ENST00000460053 ATAD2BQ9ULI0 1458 aa31.14■■■□□ 2.57
SPOCK2-204ENST00000460053 NCAPD3P42695 1498 aa31.13■■■□□ 2.57
SPOCK2-204ENST00000460053 SMARCA2P51531 1590 aa31.08■■■□□ 2.57
SPOCK2-204ENST00000460053 MROH2BQ7Z745 1585 aa31.08■■■□□ 2.57
SPOCK2-204ENST00000460053 PEG3Q9GZU2 1588 aa30.95■■■□□ 2.54
SPOCK2-204ENST00000460053 HMGXB3Q12766 1538 aa30.92■■■□□ 2.54
SPOCK2-204ENST00000460053 BAZ1BQ9UIG0 1483 aaKnown RBP30.88■■■□□ 2.53
SPOCK2-204ENST00000460053 WIZO95785 1651 aa30.74■■■□□ 2.51
SPOCK2-204ENST00000460053 RSF1Q96T23 1441 aaPredicted RBP30.73■■■□□ 2.51
SPOCK2-204ENST00000460053 NESP48681 1621 aa30.4■■■□□ 2.46
SPOCK2-204ENST00000460053 TOP2AP11388 1531 aaKnown RBP30.38■■■□□ 2.45
SPOCK2-204ENST00000460053 DNAJC5Q9H3Z4 198 aa30.29■■■□□ 2.44
SPOCK2-204ENST00000460053 ERCC6Q03468 1493 aa30.29■■■□□ 2.44
SPOCK2-204ENST00000460053 LAMC3Q9Y6N6 1575 aa30.28■■■□□ 2.44
SPOCK2-204ENST00000460053 CADPSQ9ULU8 1353 aa30.24■■■□□ 2.43
SPOCK2-204ENST00000460053 PDS5BQ9NTI5 1447 aa30.13■■■□□ 2.41
SPOCK2-204ENST00000460053 CCDC88BA6NC98 1476 aa30.08■■■□□ 2.41
SPOCK2-204ENST00000460053 CFTRP13569 1480 aa30.02■■■□□ 2.4
SPOCK2-204ENST00000460053 SUPT5HO00267 1087 aaKnown RBP30.01■■■□□ 2.39
SPOCK2-204ENST00000460053 KIF21AQ7Z4S6 1674 aa30■■■□□ 2.39
SPOCK2-204ENST00000460053 CUX2O14529 1486 aa29.98■■■□□ 2.39
SPOCK2-204ENST00000460053 THOC2Q8NI27 1593 aaKnown RBP29.88■■■□□ 2.37
SPOCK2-204ENST00000460053 FANCD2Q9BXW9 1451 aa29.87■■■□□ 2.37
SPOCK2-204ENST00000460053 CEP164Q9UPV0 1460 aa29.82■■■□□ 2.36
SPOCK2-204ENST00000460053 MRC2Q9UBG0 1479 aa29.79■■■□□ 2.36
SPOCK2-204ENST00000460053 PRDM2Q13029 1718 aa29.73■■■□□ 2.35
SPOCK2-204ENST00000460053 WDR62O43379 1518 aa29.66■■■□□ 2.34
SPOCK2-204ENST00000460053 URB2Q14146 1524 aaKnown RBP29.56■■■□□ 2.32
SPOCK2-204ENST00000460053 ABCC8Q09428 1581 aa29.39■■■□□ 2.3
SPOCK2-204ENST00000460053 TOPBP1Q92547 1522 aa29.38■■■□□ 2.29
SPOCK2-204ENST00000460053 DNMBPQ6XZF7 1577 aa29.32■■■□□ 2.28
SPOCK2-204ENST00000460053 IFT140Q96RY7 1462 aa29.21■■■□□ 2.27
SPOCK2-204ENST00000460053 CUX1P39880 1505 aa29.14■■■□□ 2.25
SPOCK2-204ENST00000460053 POLA1P09884 1462 aaPredicted RBP29.12■■■□□ 2.25
SPOCK2-204ENST00000460053 ZNF608Q9ULD9 1512 aaPredicted RBP29.09■■■□□ 2.25
SPOCK2-204ENST00000460053 FGD5Q6ZNL6 1462 aa29.06■■■□□ 2.24
SPOCK2-204ENST00000460053 SOGA1O94964 1423 aa29.06■■■□□ 2.24
SPOCK2-204ENST00000460053 TARBP1Q13395 1621 aaKnown RBP29.05■■■□□ 2.24
SPOCK2-204ENST00000460053 RAD54L2Q9Y4B4 1467 aa29.04■■■□□ 2.24
SPOCK2-204ENST00000460053 WRNQ14191 1432 aaPredicted RBP eCLIP28.96■■■□□ 2.23
SPOCK2-204ENST00000460053 AQRO60306 1485 aaKnown RBP eCLIP28.95■■■□□ 2.22
SPOCK2-204ENST00000460053 EIF4G3O43432 1585 aaKnown RBP28.92■■■□□ 2.22
SPOCK2-204ENST00000460053 TDRD9Q8NDG6 1382 aaKnown RBP28.9■■■□□ 2.22
SPOCK2-204ENST00000460053 TOP2BQ02880 1626 aa28.87■■■□□ 2.21
SPOCK2-204ENST00000460053 SYNJ1O43426 1573 aa28.87■■■□□ 2.21
SPOCK2-204ENST00000460053 BIVM-ERCC5R4GMW8 1640 aa28.86■■■□□ 2.21
SPOCK2-204ENST00000460053 OSCARQ8IYS5 282 aa28.81■■■□□ 2.2
SPOCK2-204ENST00000460053 TRIM41Q8WV44 630 aa28.81■■■□□ 2.2
SPOCK2-204ENST00000460053 WDR97A6NE52 1622 aa28.78■■■□□ 2.2
SPOCK2-204ENST00000460053 ABCA10Q8WWZ4 1543 aa28.76■■■□□ 2.19
SPOCK2-204ENST00000460053 GAPVD1Q14C86 1478 aa28.7■■■□□ 2.18
SPOCK2-204ENST00000460053 GRIN2BQ13224 1484 aa28.68■■■□□ 2.18
SPOCK2-204ENST00000460053 FBLN2P98095 1184 aa28.67■■■□□ 2.18
SPOCK2-204ENST00000460053 SNAPC4Q5SXM2 1469 aa28.64■■■□□ 2.17
SPOCK2-204ENST00000460053 ABCA5Q8WWZ7 1642 aa28.62■■■□□ 2.17
SPOCK2-204ENST00000460053 MAGI1Q96QZ7 1491 aaPredicted RBP28.59■■■□□ 2.17
SPOCK2-204ENST00000460053 PBRM1Q86U86 1689 aa28.58■■■□□ 2.17
SPOCK2-204ENST00000460053 CHD1O14646 1710 aa28.57■■■□□ 2.16
SPOCK2-204ENST00000460053 CHMP7Q8WUX9 453 aaPredicted RBP28.57■■■□□ 2.16
SPOCK2-204ENST00000460053 SYNJ2O15056 1496 aa28.49■■■□□ 2.15
SPOCK2-204ENST00000460053 ERICH3Q5RHP9 1530 aa28.42■■■□□ 2.14
SPOCK2-204ENST00000460053 KIF27Q86VH2 1401 aa28.37■■■□□ 2.13
SPOCK2-204ENST00000460053 FHAD1B1AJZ9 1412 aa28.35■■■□□ 2.13
SPOCK2-204ENST00000460053 ADAMTS12P58397 1594 aa28.35■■■□□ 2.13
SPOCK2-204ENST00000460053 GRIN2AQ12879 1464 aa28.3■■■□□ 2.12
SPOCK2-204ENST00000460053 IGF1RP08069 1367 aa28.28■■■□□ 2.12
SPOCK2-204ENST00000460053 CLASP1Q7Z460 1538 aa28.26■■■□□ 2.11
SPOCK2-204ENST00000460053 RIMBP3CA6NJZ7 1639 aa28.25■■■□□ 2.11
SPOCK2-204ENST00000460053 RIMBP3BA6NNM3 1639 aa28.25■■■□□ 2.11
SPOCK2-204ENST00000460053 RIMBP3Q9UFD9 1639 aa28.25■■■□□ 2.11
SPOCK2-204ENST00000460053 ARHGEF11O15085 1522 aa28.24■■■□□ 2.11
SPOCK2-204ENST00000460053 NUP160Q12769 1436 aa28.18■■■□□ 2.1
SPOCK2-204ENST00000460053 CEP170Q5SW79 1584 aa28.16■■■□□ 2.1
SPOCK2-204ENST00000460053 CUL7Q14999 1698 aa28.13■■■□□ 2.09
SPOCK2-204ENST00000460053 RUSC2Q8N2Y8 1516 aa28.13■■■□□ 2.09
SPOCK2-204ENST00000460053 CARMIL1Q5VZK9 1371 aa28.12■■■□□ 2.09
SPOCK2-204ENST00000460053 CYB5RLQ6IPT4 315 aa28.09■■■□□ 2.09
SPOCK2-204ENST00000460053 ARAP1Q96P48 1450 aa28.02■■■□□ 2.08
SPOCK2-204ENST00000460053 JPH4Q96JJ6 628 aa27.98■■■□□ 2.07
SPOCK2-204ENST00000460053 CHIC1Q5VXU3 224 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms