RNA–Protein interactions for RNA: ENST00000336279.9

HEPH-201, Transcript of hephaestin, humanhuman

TSL 1 (best) BASIC

Gene HEPH, Length 4,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HEPH-201ENST00000336279 NISCHQ9Y2I1 1504 aa16.36■□□□□ 0.21
HEPH-201ENST00000336279 DCAF8L2P0C7V8 631 aa14.97□□□□□ -0.01
HEPH-201ENST00000336279 CCDC180Q9P1Z9 1646 aa14.44□□□□□ -0.1
HEPH-201ENST00000336279 ABCC9O60706 1549 aa14□□□□□ -0.17
HEPH-201ENST00000336279 SHROOM4Q9ULL8 1493 aa13.95□□□□□ -0.18
HEPH-201ENST00000336279 ZCCHC6Q5VYS8 1495 aaKnown RBP13.73□□□□□ -0.21
HEPH-201ENST00000336279 SUPT5HO00267 1087 aaKnown RBP13.69□□□□□ -0.22
HEPH-201ENST00000336279 DCAF1Q9Y4B6 1507 aa13.62□□□□□ -0.23
HEPH-201ENST00000336279 MYO15BQ96JP2 1530 aa13.54□□□□□ -0.24
HEPH-201ENST00000336279 PABPN1Q86U42 306 aaKnown RBP eCLIP13.48□□□□□ -0.25
HEPH-201ENST00000336279 NACADO15069 1562 aa13.43□□□□□ -0.26
HEPH-201ENST00000336279 RB1CC1Q8TDY2 1594 aa13.32□□□□□ -0.28
HEPH-201ENST00000336279 SCRIBQ14160 1630 aa13.14□□□□□ -0.31
HEPH-201ENST00000336279 UNC13AQ9UPW8 1703 aa13.1□□□□□ -0.31
HEPH-201ENST00000336279 BICRAQ9NZM4 1560 aa12.94□□□□□ -0.34
HEPH-201ENST00000336279 TRIM41Q8WV44 630 aa12.85□□□□□ -0.35
HEPH-201ENST00000336279 FAM9AQ8IZU1 332 aaPredicted RBP12.79□□□□□ -0.36
HEPH-201ENST00000336279 EHMT2Q96KQ7 1210 aa12.77□□□□□ -0.36
HEPH-201ENST00000336279 CECR2Q9BXF3 1484 aa12.65□□□□□ -0.38
HEPH-201ENST00000336279 BAZ1AQ9NRL2 1556 aaPredicted RBP12.65□□□□□ -0.38
HEPH-201ENST00000336279 SMARCA4P51532 1647 aa12.62□□□□□ -0.39
HEPH-201ENST00000336279 BAZ1BQ9UIG0 1483 aaKnown RBP12.6□□□□□ -0.39
HEPH-201ENST00000336279 MROH2BQ7Z745 1585 aa12.59□□□□□ -0.39
HEPH-201ENST00000336279 RSF1Q96T23 1441 aaPredicted RBP12.59□□□□□ -0.39
HEPH-201ENST00000336279 APLP2Q06481 763 aa12.56□□□□□ -0.4
HEPH-201ENST00000336279 UBTFP17480 764 aaKnown RBP12.56□□□□□ -0.4
HEPH-201ENST00000336279 PEG3Q9GZU2 1588 aa12.54□□□□□ -0.4
HEPH-201ENST00000336279 RANGAP1P46060 587 aaPredicted RBP12.53□□□□□ -0.4
HEPH-201ENST00000336279 EIF4G1Q04637 1599 aaKnown RBP12.53□□□□□ -0.4
HEPH-201ENST00000336279 WIZO95785 1651 aa12.49□□□□□ -0.41
HEPH-201ENST00000336279 SMARCA2P51531 1590 aa12.48□□□□□ -0.41
HEPH-201ENST00000336279 CHIC1Q5VXU3 224 aa12.46□□□□□ -0.42
HEPH-201ENST00000336279 ATP1B4Q9UN42 357 aaPredicted RBP12.42□□□□□ -0.42
HEPH-201ENST00000336279 ATAD2BQ9ULI0 1458 aa12.42□□□□□ -0.42
HEPH-201ENST00000336279 FBLN2P98095 1184 aa12.41□□□□□ -0.42
HEPH-201ENST00000336279 TOP2AP11388 1531 aaKnown RBP12.4□□□□□ -0.42
HEPH-201ENST00000336279 ERCC6Q03468 1493 aa12.39□□□□□ -0.43
HEPH-201ENST00000336279 HMGXB3Q12766 1538 aa12.37□□□□□ -0.43
HEPH-201ENST00000336279 CC2D2AQ9P2K1 1620 aa12.37□□□□□ -0.43
HEPH-201ENST00000336279 NCAPD3P42695 1498 aa12.37□□□□□ -0.43
HEPH-201ENST00000336279 TTBK1Q5TCY1 1321 aaPredicted RBP12.33□□□□□ -0.44
HEPH-201ENST00000336279 PDS5BQ9NTI5 1447 aa12.3□□□□□ -0.44
HEPH-201ENST00000336279 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.26□□□□□ -0.45
HEPH-201ENST00000336279 HNRNPUL2Q1KMD3 747 aaKnown RBP12.26□□□□□ -0.45
HEPH-201ENST00000336279 CADPSQ9ULU8 1353 aa12.25□□□□□ -0.45
HEPH-201ENST00000336279 CCDC88BA6NC98 1476 aa12.22□□□□□ -0.45
HEPH-201ENST00000336279 CSRNP3Q8WYN3 585 aa12.22□□□□□ -0.45
HEPH-201ENST00000336279 DNAJC5BQ9UF47 199 aa12.22□□□□□ -0.45
HEPH-201ENST00000336279 CHMP7Q8WUX9 453 aaPredicted RBP12.19□□□□□ -0.46
HEPH-201ENST00000336279 WRNQ14191 1432 aaPredicted RBP eCLIP12.18□□□□□ -0.469e-6■■■■■ 50.1
HEPH-201ENST00000336279 LOC105371045A0A1W2PR82 267 aa12.15□□□□□ -0.46
HEPH-201ENST00000336279 CEP164Q9UPV0 1460 aa12.08□□□□□ -0.48
HEPH-201ENST00000336279 PRDM2Q13029 1718 aa12.08□□□□□ -0.48
HEPH-201ENST00000336279 FANCD2Q9BXW9 1451 aa12.05□□□□□ -0.48
HEPH-201ENST00000336279 KIF27Q86VH2 1401 aa12.05□□□□□ -0.48
HEPH-201ENST00000336279 CFTRP13569 1480 aa12.04□□□□□ -0.48
HEPH-201ENST00000336279 MYT1LQ9UL68 1186 aa12.03□□□□□ -0.48
HEPH-201ENST00000336279 NPM1P06748 294 aaKnown RBP eCLIP12.03□□□□□ -0.48
HEPH-201ENST00000336279 P3H3Q8IVL6 736 aa12.02□□□□□ -0.49
HEPH-201ENST00000336279 SOGA1O94964 1423 aa12.01□□□□□ -0.49
HEPH-201ENST00000336279 ABCC8Q09428 1581 aa12□□□□□ -0.49
HEPH-201ENST00000336279 LAMC3Q9Y6N6 1575 aa11.99□□□□□ -0.49
HEPH-201ENST00000336279 EEA1Q15075 1411 aa11.99□□□□□ -0.49
HEPH-201ENST00000336279 CUX2O14529 1486 aa11.96□□□□□ -0.49
HEPH-201ENST00000336279 TDRD9Q8NDG6 1382 aaKnown RBP11.95□□□□□ -0.5
HEPH-201ENST00000336279 CDK11AQ9UQ88 783 aaPredicted RBP11.94□□□□□ -0.5
HEPH-201ENST00000336279 PPARGC1BQ86YN6 1023 aaKnown RBP11.94□□□□□ -0.5
HEPH-201ENST00000336279 NESP48681 1621 aa11.92□□□□□ -0.5
HEPH-201ENST00000336279 ARID3CA6NKF2 412 aa11.9□□□□□ -0.5
HEPH-201ENST00000336279 CARMIL1Q5VZK9 1371 aa11.89□□□□□ -0.51
HEPH-201ENST00000336279 BIVM-ERCC5R4GMW8 1640 aa11.86□□□□□ -0.51
HEPH-201ENST00000336279 ITGAEP38570 1179 aa11.85□□□□□ -0.51
HEPH-201ENST00000336279 MRC2Q9UBG0 1479 aa11.85□□□□□ -0.51
HEPH-201ENST00000336279 TOP2BQ02880 1626 aa11.83□□□□□ -0.52
HEPH-201ENST00000336279 KIF21AQ7Z4S6 1674 aa11.83□□□□□ -0.52
HEPH-201ENST00000336279 SYNJ1O43426 1573 aa11.83□□□□□ -0.52
HEPH-201ENST00000336279 PCGF6Q9BYE7 350 aa11.82□□□□□ -0.52
HEPH-201ENST00000336279 OSCARQ8IYS5 282 aa11.81□□□□□ -0.52
HEPH-201ENST00000336279 GOLGA3Q08378 1498 aa11.81□□□□□ -0.52
HEPH-201ENST00000336279 CUX1P39880 1505 aa11.8□□□□□ -0.52
HEPH-201ENST00000336279 FGD5Q6ZNL6 1462 aa11.79□□□□□ -0.52
HEPH-201ENST00000336279 FAM50AQ14320 339 aaKnown RBP11.78□□□□□ -0.52
HEPH-201ENST00000336279 DNMBPQ6XZF7 1577 aa11.77□□□□□ -0.52
HEPH-201ENST00000336279 CLIP1P30622 1438 aa11.75□□□□□ -0.53
HEPH-201ENST00000336279 RAD54L2Q9Y4B4 1467 aa11.74□□□□□ -0.53
HEPH-201ENST00000336279 GAPVD1Q14C86 1478 aa11.74□□□□□ -0.53
HEPH-201ENST00000336279 PLEKHD1A6NEE1 506 aa11.74□□□□□ -0.53
HEPH-201ENST00000336279 CARMIL2Q6F5E8 1435 aa11.73□□□□□ -0.53
HEPH-201ENST00000336279 IFT140Q96RY7 1462 aa11.73□□□□□ -0.53
HEPH-201ENST00000336279 URB2Q14146 1524 aaKnown RBP11.73□□□□□ -0.53
HEPH-201ENST00000336279 TOPBP1Q92547 1522 aa11.73□□□□□ -0.53
HEPH-201ENST00000336279 ZNF777Q9ULD5 760 aaPredicted RBP11.73□□□□□ -0.53
HEPH-201ENST00000336279 TRIM26Q12899 539 aaPredicted RBP11.71□□□□□ -0.53
HEPH-201ENST00000336279 AQRO60306 1485 aaKnown RBP eCLIP11.71□□□□□ -0.532e-6■■■■□ 25.1
HEPH-201ENST00000336279 JPH4Q96JJ6 628 aa11.71□□□□□ -0.54
HEPH-201ENST00000336279 THOC2Q8NI27 1593 aaKnown RBP11.7□□□□□ -0.54
HEPH-201ENST00000336279 WDR62O43379 1518 aa11.7□□□□□ -0.54
HEPH-201ENST00000336279 KCNH8Q96L42 1107 aa11.7□□□□□ -0.54
HEPH-201ENST00000336279 TNIKQ9UKE5 1360 aa11.69□□□□□ -0.54
HEPH-201ENST00000336279 CCER1Q8TC90 406 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms