Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.233e-9■■■■□ 22.3
LARP4Q71RC2 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.273e-9■■■■□ 22.3
LARP4Q71RC2 TEX264-211ENST00000463857 3937 ntTSL 1 (best)12.87□□□□□ -0.353e-9■■■■□ 22.3
LARP4Q71RC2 TIMM23B-204ENST00000483296 1156 ntTSL 215.58■□□□□ 0.082e-6■■■■□ 22.3
LARP4Q71RC2 TIMM23B-203ENST00000478381 2623 ntTSL 211.73□□□□□ -0.532e-6■■■■□ 22.3
LARP4Q71RC2 TIMM23B-202ENST00000451577 1152 ntTSL 2 BASIC10.98□□□□□ -0.652e-6■■■■□ 22.3
LARP4Q71RC2 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.662e-6■■■■□ 22.3
LARP4Q71RC2 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.647e-33■■■■□ 22.3
LARP4Q71RC2 CD74-209ENST00000523208 767 ntTSL 510.85□□□□□ -0.677e-33■■■■□ 22.3
LARP4Q71RC2 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.66□□□□□ -0.221e-9■■■■□ 22.3
LARP4Q71RC2 CFL1-214ENST00000534769 758 ntTSL 2 BASIC12.7□□□□□ -0.381e-9■■■■□ 22.3
LARP4Q71RC2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.1■□□□□ 0.493e-9■■■■□ 22.3
LARP4Q71RC2 JPT2-213ENST00000569256 911 ntTSL 1 (best)16.41■□□□□ 0.223e-9■■■■□ 22.3
LARP4Q71RC2 JPT2-209ENST00000566742 593 ntTSL 414.95□□□□□ -0.023e-9■■■■□ 22.3
LARP4Q71RC2 JPT2-206ENST00000562684 3185 ntTSL 2 BASIC12.2□□□□□ -0.463e-9■■■■□ 22.3
LARP4Q71RC2 JPT2-201ENST00000248098 3718 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.493e-9■■■■□ 22.3
LARP4Q71RC2 JPT2-205ENST00000562569 458 ntTSL 35.96□□□□□ -1.463e-9■■■■□ 22.3
LARP4Q71RC2 PRKCSH-213ENST00000591510 591 ntTSL 314.86□□□□□ -0.037e-18■■■■□ 22.3
LARP4Q71RC2 DCTN1-221ENST00000491465 2444 ntTSL 1 (best)15.01□□□□□ -0.012e-6■■■■□ 22.3
LARP4Q71RC2 DCTN1-225ENST00000497666 479 ntTSL 314.82□□□□□ -0.042e-6■■■■□ 22.3
LARP4Q71RC2 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.082e-6■■■■□ 22.3
LARP4Q71RC2 DCTN1-210ENST00000434055 4229 ntTSL 212.55□□□□□ -0.42e-6■■■■□ 22.3
LARP4Q71RC2 DCTN1-218ENST00000466110 5414 ntTSL 212.32□□□□□ -0.442e-6■■■■□ 22.3
LARP4Q71RC2 DCTN1-206ENST00000409868 4202 ntTSL 5 BASIC11.79□□□□□ -0.522e-6■■■■□ 22.3
LARP4Q71RC2 DCTN1-227ENST00000633691 4160 ntTSL 5 BASIC10.98□□□□□ -0.652e-6■■■■□ 22.3
LARP4Q71RC2 DCTN1-201ENST00000361874 4500 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.682e-6■■■■□ 22.3
LARP4Q71RC2 DCTN1-202ENST00000394003 4479 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.712e-6■■■■□ 22.3
LARP4Q71RC2 DCTN1-204ENST00000409438 4145 ntTSL 1 (best) BASIC10.33□□□□□ -0.762e-6■■■■□ 22.3
LARP4Q71RC2 AC006030.1-201ENST00000451608 5059 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.82e-6■■■■□ 22.3
LARP4Q71RC2 DCTN1-226ENST00000628224 4485 ntTSL 5 BASIC9.65□□□□□ -0.872e-6■■■■□ 22.3
LARP4Q71RC2 C20orf27-203ENST00000399672 1734 ntAPPRIS P1 TSL 225.42■■□□□ 1.662e-8■■■■□ 22.2
LARP4Q71RC2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.982e-8■■■■□ 22.2
LARP4Q71RC2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.89■□□□□ 0.452e-8■■■■□ 22.2
LARP4Q71RC2 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.157e-6■■■■□ 22.2
LARP4Q71RC2 CRAT-205ENST00000455396 795 ntTSL 310.94□□□□□ -0.667e-6■■■■□ 22.2
LARP4Q71RC2 PLEKHJ1-202ENST00000585423 494 ntTSL 224.34■■□□□ 1.493e-7■■■■□ 22.2
LARP4Q71RC2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.53■■□□□ 1.23e-7■■■■□ 22.2
LARP4Q71RC2 HBG2-203ENST00000380259 1772 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.753e-7■■■■□ 22.2
LARP4Q71RC2 SSR4-209ENST00000482902 2409 ntTSL 217.96■□□□□ 0.478e-13■■■■□ 22.2
LARP4Q71RC2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.288e-13■■■■□ 22.2
LARP4Q71RC2 SSR4-206ENST00000460616 2482 ntTSL 215.51■□□□□ 0.078e-13■■■■□ 22.2
LARP4Q71RC2 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.28e-13■■■■□ 22.2
LARP4Q71RC2 SSR4-208ENST00000471880 785 ntTSL 513.57□□□□□ -0.248e-13■■■■□ 22.2
LARP4Q71RC2 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.298e-13■■■■□ 22.2
LARP4Q71RC2 SSR4-202ENST00000370085 526 ntTSL 2 BASIC12.82□□□□□ -0.368e-13■■■■□ 22.2
LARP4Q71RC2 SSR4-211ENST00000486204 658 ntTSL 311.95□□□□□ -0.58e-13■■■■□ 22.2
LARP4Q71RC2 SSR4-205ENST00000447375 427 ntTSL 211.4□□□□□ -0.588e-13■■■■□ 22.2
LARP4Q71RC2 SSR4-210ENST00000485612 701 ntTSL 210.93□□□□□ -0.668e-13■■■■□ 22.2
LARP4Q71RC2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.818e-18■■■■□ 22.2
LARP4Q71RC2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.418e-18■■■■□ 22.2
LARP4Q71RC2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.078e-18■■■■□ 22.2
LARP4Q71RC2 TAF15-210ENST00000604694 891 ntTSL 515.41■□□□□ 0.068e-18■■■■□ 22.2
LARP4Q71RC2 FAM162A-203ENST00000477892 3052 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.788e-24■■■■□ 22.2
LARP4Q71RC2 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.29□□□□□ -1.568e-24■■■■□ 22.2
LARP4Q71RC2 COPS9-203ENST00000489698 640 ntTSL 222.15■■□□□ 1.147e-10■■■■□ 22.2
LARP4Q71RC2 COPS9-204ENST00000491765 619 ntTSL 210.03□□□□□ -0.87e-10■■■■□ 22.2
LARP4Q71RC2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.37e-21■■■■□ 22.2
LARP4Q71RC2 POLR2E-205ENST00000586817 2441 ntTSL 222.76■■□□□ 1.239e-8■■■■□ 22.2
LARP4Q71RC2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.03■□□□□ 0.967e-21■■■■□ 22.2
LARP4Q71RC2 KIAA0319L-215ENST00000478463 1489 ntTSL 221.01■□□□□ 0.959e-8■■■■□ 22.2
LARP4Q71RC2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.95■□□□□ 0.629e-8■■■■□ 22.2
LARP4Q71RC2 POLR2E-207ENST00000590060 1052 ntTSL 518.67■□□□□ 0.587e-9■■■■□ 22.2
LARP4Q71RC2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.55■□□□□ 0.48e-8■■■■□ 22.2
LARP4Q71RC2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.35■□□□□ 0.379e-8■■■■□ 22.2
LARP4Q71RC2 INVS-205ENST00000466647 767 ntTSL 317.15■□□□□ 0.345e-7■■■■□ 22.2
LARP4Q71RC2 KIAA0319L-209ENST00000470388 872 ntTSL 516.84■□□□□ 0.299e-8■■■■□ 22.2
LARP4Q71RC2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.278e-8■■■■□ 22.2
LARP4Q71RC2 KIAA0319L-219ENST00000492888 872 ntTSL 316.41■□□□□ 0.229e-8■■■■□ 22.2
LARP4Q71RC2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.15■□□□□ 0.189e-8■■■■□ 22.2
LARP4Q71RC2 KIAA0319L-216ENST00000482929 1524 ntTSL 216.07■□□□□ 0.169e-8■■■■□ 22.2
LARP4Q71RC2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.01■□□□□ 0.159e-8■■■■□ 22.2
LARP4Q71RC2 POLR2E-201ENST00000215587 1286 ntTSL 315.88■□□□□ 0.139e-8■■■■□ 22.2
LARP4Q71RC2 METAP2-203ENST00000535095 2431 ntTSL 215.56■□□□□ 0.089e-8■■■■□ 22.2
LARP4Q71RC2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.069e-8■■■■□ 22.2
LARP4Q71RC2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.059e-8■■■■□ 22.2
LARP4Q71RC2 POLR2E-209ENST00000591767 1214 ntTSL 215.35■□□□□ 0.059e-8■■■■□ 22.2
LARP4Q71RC2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.029e-8■■■■□ 22.2
LARP4Q71RC2 WDR1-206ENST00000502962 1411 ntTSL 515.13■□□□□ 0.019e-8■■■■□ 22.2
LARP4Q71RC2 WDR1-215ENST00000510848 554 ntTSL 415.08■□□□□ 09e-8■■■■□ 22.2
LARP4Q71RC2 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.029e-8■■■■□ 22.2
LARP4Q71RC2 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.039e-8■■■■□ 22.2
LARP4Q71RC2 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.87□□□□□ -0.039e-8■■■■□ 22.2
LARP4Q71RC2 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.049e-8■■■■□ 22.2
LARP4Q71RC2 INVS-207ENST00000496467 714 ntTSL 214.7□□□□□ -0.065e-7■■■■□ 22.2
LARP4Q71RC2 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.079e-8■■■■□ 22.2
LARP4Q71RC2 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.089e-8■■■■□ 22.2
LARP4Q71RC2 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.36□□□□□ -0.118e-8■■■■□ 22.2
LARP4Q71RC2 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.89□□□□□ -0.195e-7■■■■□ 22.2
LARP4Q71RC2 POLR2E-206ENST00000589737 1105 ntTSL 213.62□□□□□ -0.239e-8■■■■□ 22.2
LARP4Q71RC2 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.6□□□□□ -0.239e-8■■■■□ 22.2
LARP4Q71RC2 WDR1-214ENST00000509695 467 ntTSL 413.5□□□□□ -0.259e-8■■■■□ 22.2
LARP4Q71RC2 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.48□□□□□ -0.259e-8■■■■□ 22.2
LARP4Q71RC2 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.271e-6■■■■□ 22.2
LARP4Q71RC2 WDR1-212ENST00000508949 552 ntTSL 413.28□□□□□ -0.289e-8■■■■□ 22.2
LARP4Q71RC2 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.339e-8■■■■□ 22.2
LARP4Q71RC2 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.9□□□□□ -0.341e-6■■■■□ 22.2
LARP4Q71RC2 WDR1-208ENST00000505543 687 ntTSL 412.87□□□□□ -0.359e-8■■■■□ 22.2
LARP4Q71RC2 WDR1-211ENST00000508079 812 ntTSL 312.29□□□□□ -0.449e-8■■■■□ 22.2
LARP4Q71RC2 INVS-202ENST00000262457 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.455e-7■■■■□ 22.2
LARP4Q71RC2 KIAA0319L-203ENST00000426982 3213 ntTSL 512.22□□□□□ -0.459e-8■■■■□ 22.2
Retrieved 100 of 15,922 protein–RNA pairs in 134.4 ms