RNA–Protein interactions for RNA: ENST00000491765.5

COPS9-204, Transcript of COP9 signalosome subunit 9, humanhuman

TSL 2

Gene COPS9, Length 619 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9-204ENST00000491765 NISCHQ9Y2I1 1504 aa27.06■■□□□ 1.92
COPS9-204ENST00000491765 CCDC180Q9P1Z9 1646 aa24.11■■□□□ 1.45
COPS9-204ENST00000491765 ABCC9O60706 1549 aa24.1■■□□□ 1.45
COPS9-204ENST00000491765 RB1CC1Q8TDY2 1594 aa22.77■■□□□ 1.24
COPS9-204ENST00000491765 DNAJC5BQ9UF47 199 aa22.77■■□□□ 1.24
COPS9-204ENST00000491765 DCAF8L2P0C7V8 631 aa22.62■■□□□ 1.21
COPS9-204ENST00000491765 NACADO15069 1562 aa22.6■■□□□ 1.21
COPS9-204ENST00000491765 ZCCHC6Q5VYS8 1495 aaKnown RBP22.6■■□□□ 1.21
COPS9-204ENST00000491765 MYO15BQ96JP2 1530 aa22.5■■□□□ 1.19
COPS9-204ENST00000491765 PABPN1Q86U42 306 aaKnown RBP eCLIP22.49■■□□□ 1.19
COPS9-204ENST00000491765 DCAF1Q9Y4B6 1507 aa22.41■■□□□ 1.18
COPS9-204ENST00000491765 UNC13AQ9UPW8 1703 aa22.31■■□□□ 1.16
COPS9-204ENST00000491765 BICRAQ9NZM4 1560 aa22.25■■□□□ 1.15
COPS9-204ENST00000491765 SCRIBQ14160 1630 aa21.95■■□□□ 1.1
COPS9-204ENST00000491765 SHROOM4Q9ULL8 1493 aa21.73■■□□□ 1.07
COPS9-204ENST00000491765 CC2D2AQ9P2K1 1620 aa21.71■■□□□ 1.07
COPS9-204ENST00000491765 CECR2Q9BXF3 1484 aa21.65■■□□□ 1.06
COPS9-204ENST00000491765 EIF4G1Q04637 1599 aaKnown RBP21.64■■□□□ 1.05
COPS9-204ENST00000491765 SMARCA4P51532 1647 aa21.03■□□□□ 0.96
COPS9-204ENST00000491765 NCAPD3P42695 1498 aa20.93■□□□□ 0.94
COPS9-204ENST00000491765 BAZ1AQ9NRL2 1556 aaPredicted RBP20.92■□□□□ 0.94
COPS9-204ENST00000491765 MROH2BQ7Z745 1585 aa20.89■□□□□ 0.94
COPS9-204ENST00000491765 ATAD2BQ9ULI0 1458 aa20.89■□□□□ 0.94
COPS9-204ENST00000491765 PEG3Q9GZU2 1588 aa20.86■□□□□ 0.93
COPS9-204ENST00000491765 DNAJC5Q9H3Z4 198 aa20.79■□□□□ 0.92
COPS9-204ENST00000491765 SMARCA2P51531 1590 aa20.78■□□□□ 0.92
COPS9-204ENST00000491765 HMGXB3Q12766 1538 aa20.78■□□□□ 0.92
COPS9-204ENST00000491765 NESP48681 1621 aa20.73■□□□□ 0.91
COPS9-204ENST00000491765 ERCC6Q03468 1493 aa20.71■□□□□ 0.91
COPS9-204ENST00000491765 WIZO95785 1651 aa20.67■□□□□ 0.9
COPS9-204ENST00000491765 CUX2O14529 1486 aa20.65■□□□□ 0.9
COPS9-204ENST00000491765 BAZ1BQ9UIG0 1483 aaKnown RBP20.64■□□□□ 0.89
COPS9-204ENST00000491765 RSF1Q96T23 1441 aaPredicted RBP20.6■□□□□ 0.89
COPS9-204ENST00000491765 THOC2Q8NI27 1593 aaKnown RBP20.43■□□□□ 0.86
COPS9-204ENST00000491765 TOP2AP11388 1531 aaKnown RBP20.42■□□□□ 0.86
COPS9-204ENST00000491765 LAMC3Q9Y6N6 1575 aa20.4■□□□□ 0.86
COPS9-204ENST00000491765 KIF21AQ7Z4S6 1674 aa20.35■□□□□ 0.85
COPS9-204ENST00000491765 CADPSQ9ULU8 1353 aa20.3■□□□□ 0.84
COPS9-204ENST00000491765 PDS5BQ9NTI5 1447 aa20.29■□□□□ 0.84
COPS9-204ENST00000491765 MRC2Q9UBG0 1479 aa20.17■□□□□ 0.82
COPS9-204ENST00000491765 CCDC88BA6NC98 1476 aa20.14■□□□□ 0.81
COPS9-204ENST00000491765 WDR62O43379 1518 aa20.12■□□□□ 0.81
COPS9-204ENST00000491765 CFTRP13569 1480 aa20.11■□□□□ 0.81
COPS9-204ENST00000491765 FANCD2Q9BXW9 1451 aa20.08■□□□□ 0.81
COPS9-204ENST00000491765 PRDM2Q13029 1718 aa20.07■□□□□ 0.8
COPS9-204ENST00000491765 CEP164Q9UPV0 1460 aa20.06■□□□□ 0.8
COPS9-204ENST00000491765 URB2Q14146 1524 aaKnown RBP19.97■□□□□ 0.79
COPS9-204ENST00000491765 TRIM41Q8WV44 630 aa19.9■□□□□ 0.78
COPS9-204ENST00000491765 SUPT5HO00267 1087 aaKnown RBP19.83■□□□□ 0.77
COPS9-204ENST00000491765 ZNF608Q9ULD9 1512 aaPredicted RBP19.76■□□□□ 0.75
COPS9-204ENST00000491765 OSCARQ8IYS5 282 aa19.74■□□□□ 0.75
COPS9-204ENST00000491765 TOPBP1Q92547 1522 aa19.7■□□□□ 0.74
COPS9-204ENST00000491765 DNMBPQ6XZF7 1577 aa19.67■□□□□ 0.74
COPS9-204ENST00000491765 IFT140Q96RY7 1462 aa19.66■□□□□ 0.74
COPS9-204ENST00000491765 CUX1P39880 1505 aa19.6■□□□□ 0.73
COPS9-204ENST00000491765 TARBP1Q13395 1621 aaKnown RBP19.57■□□□□ 0.72
COPS9-204ENST00000491765 ABCC8Q09428 1581 aa19.56■□□□□ 0.72
COPS9-204ENST00000491765 AQRO60306 1485 aaKnown RBP eCLIP19.55■□□□□ 0.72
COPS9-204ENST00000491765 EIF4G3O43432 1585 aaKnown RBP19.55■□□□□ 0.72
COPS9-204ENST00000491765 POLA1P09884 1462 aaPredicted RBP19.54■□□□□ 0.72
COPS9-204ENST00000491765 RIMBP3CA6NJZ7 1639 aa19.53■□□□□ 0.72
COPS9-204ENST00000491765 RIMBP3BA6NNM3 1639 aa19.53■□□□□ 0.72
COPS9-204ENST00000491765 RIMBP3Q9UFD9 1639 aa19.53■□□□□ 0.72
COPS9-204ENST00000491765 RAD54L2Q9Y4B4 1467 aa19.5■□□□□ 0.71
COPS9-204ENST00000491765 WDR97A6NE52 1622 aa19.47■□□□□ 0.71
COPS9-204ENST00000491765 FGD5Q6ZNL6 1462 aa19.47■□□□□ 0.71
COPS9-204ENST00000491765 ARHGEF11O15085 1522 aa19.46■□□□□ 0.71
COPS9-204ENST00000491765 BIVM-ERCC5R4GMW8 1640 aa19.46■□□□□ 0.71
COPS9-204ENST00000491765 SYNJ1O43426 1573 aa19.45■□□□□ 0.7
COPS9-204ENST00000491765 TDRD9Q8NDG6 1382 aaKnown RBP19.43■□□□□ 0.7
COPS9-204ENST00000491765 CHD1O14646 1710 aa19.41■□□□□ 0.7
COPS9-204ENST00000491765 SOGA1O94964 1423 aa19.41■□□□□ 0.7
COPS9-204ENST00000491765 TOP2BQ02880 1626 aa19.4■□□□□ 0.7
COPS9-204ENST00000491765 FBLN2P98095 1184 aa19.4■□□□□ 0.7
COPS9-204ENST00000491765 CYB5RLQ6IPT4 315 aa19.36■□□□□ 0.69
COPS9-204ENST00000491765 WRNQ14191 1432 aaPredicted RBP eCLIP19.34■□□□□ 0.69
COPS9-204ENST00000491765 SNAPC4Q5SXM2 1469 aa19.31■□□□□ 0.68
COPS9-204ENST00000491765 ARAP1Q96P48 1450 aa19.3■□□□□ 0.68
COPS9-204ENST00000491765 ABCA5Q8WWZ7 1642 aa19.3■□□□□ 0.68
COPS9-204ENST00000491765 ABCA10Q8WWZ4 1543 aa19.29■□□□□ 0.68
COPS9-204ENST00000491765 PBRM1Q86U86 1689 aa19.24■□□□□ 0.67
COPS9-204ENST00000491765 CLASP1Q7Z460 1538 aa19.21■□□□□ 0.67
COPS9-204ENST00000491765 CHMP7Q8WUX9 453 aaPredicted RBP19.2■□□□□ 0.66
COPS9-204ENST00000491765 GRIN2BQ13224 1484 aa19.2■□□□□ 0.66
COPS9-204ENST00000491765 MAGI1Q96QZ7 1491 aaPredicted RBP19.18■□□□□ 0.66
COPS9-204ENST00000491765 SYNJ2O15056 1496 aa19.15■□□□□ 0.66
COPS9-204ENST00000491765 GAPVD1Q14C86 1478 aa19.15■□□□□ 0.66
COPS9-204ENST00000491765 TRHP20396 242 aaPredicted RBP19.11■□□□□ 0.65
COPS9-204ENST00000491765 ADAMTS12P58397 1594 aa19.09■□□□□ 0.65
COPS9-204ENST00000491765 ERICH3Q5RHP9 1530 aa19.04■□□□□ 0.64
COPS9-204ENST00000491765 ERCC6L2Q5T890 1561 aa19.01■□□□□ 0.63
COPS9-204ENST00000491765 GRIN2AQ12879 1464 aa18.98■□□□□ 0.63
COPS9-204ENST00000491765 CEP170Q5SW79 1584 aa18.96■□□□□ 0.63
COPS9-204ENST00000491765 NUP160Q12769 1436 aa18.92■□□□□ 0.62
COPS9-204ENST00000491765 FHAD1B1AJZ9 1412 aa18.91■□□□□ 0.62
COPS9-204ENST00000491765 RUSC2Q8N2Y8 1516 aa18.89■□□□□ 0.61
COPS9-204ENST00000491765 IGF1RP08069 1367 aa18.88■□□□□ 0.61
COPS9-204ENST00000491765 KIF27Q86VH2 1401 aa18.88■□□□□ 0.61
COPS9-204ENST00000491765 CUL7Q14999 1698 aa18.88■□□□□ 0.61
COPS9-204ENST00000491765 SHROOM2Q13796 1616 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms