RNA–Protein interactions for RNA: ENST00000591510.1

PRKCSH-213, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 591 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-213ENST00000591510 NISCHQ9Y2I1 1504 aa39.04■■■■□ 3.84
PRKCSH-213ENST00000591510 CCDC180Q9P1Z9 1646 aa34.66■■■■□ 3.14
PRKCSH-213ENST00000591510 ABCC9O60706 1549 aa33.68■■■□□ 2.98
PRKCSH-213ENST00000591510 ZCCHC6Q5VYS8 1495 aaKnown RBP32.59■■■□□ 2.81
PRKCSH-213ENST00000591510 NACADO15069 1562 aa32.51■■■□□ 2.79
PRKCSH-213ENST00000591510 RB1CC1Q8TDY2 1594 aa32.49■■■□□ 2.79
PRKCSH-213ENST00000591510 MYO15BQ96JP2 1530 aa32.44■■■□□ 2.78
PRKCSH-213ENST00000591510 DCAF1Q9Y4B6 1507 aa32.36■■■□□ 2.77
PRKCSH-213ENST00000591510 DCAF8L2P0C7V8 631 aa32.26■■■□□ 2.75
PRKCSH-213ENST00000591510 UNC13AQ9UPW8 1703 aa31.85■■■□□ 2.69
PRKCSH-213ENST00000591510 BICRAQ9NZM4 1560 aa31.62■■■□□ 2.65
PRKCSH-213ENST00000591510 SCRIBQ14160 1630 aa31.57■■■□□ 2.64
PRKCSH-213ENST00000591510 PABPN1Q86U42 306 aaKnown RBP eCLIP31.44■■■□□ 2.62
PRKCSH-213ENST00000591510 SHROOM4Q9ULL8 1493 aa31.26■■■□□ 2.59
PRKCSH-213ENST00000591510 DNAJC5BQ9UF47 199 aa30.83■■■□□ 2.53
PRKCSH-213ENST00000591510 EIF4G1Q04637 1599 aaKnown RBP30.7■■■□□ 2.5
PRKCSH-213ENST00000591510 CC2D2AQ9P2K1 1620 aa30.52■■■□□ 2.48
PRKCSH-213ENST00000591510 CECR2Q9BXF3 1484 aa30.4■■■□□ 2.46
PRKCSH-213ENST00000591510 SMARCA4P51532 1647 aa30.27■■■□□ 2.44
PRKCSH-213ENST00000591510 BAZ1AQ9NRL2 1556 aaPredicted RBP30.21■■■□□ 2.43
PRKCSH-213ENST00000591510 MROH2BQ7Z745 1585 aa30.1■■■□□ 2.41
PRKCSH-213ENST00000591510 ATAD2BQ9ULI0 1458 aa30.06■■■□□ 2.4
PRKCSH-213ENST00000591510 PEG3Q9GZU2 1588 aa30.03■■■□□ 2.4
PRKCSH-213ENST00000591510 NCAPD3P42695 1498 aa30.02■■■□□ 2.4
PRKCSH-213ENST00000591510 SMARCA2P51531 1590 aa29.99■■■□□ 2.39
PRKCSH-213ENST00000591510 HMGXB3Q12766 1538 aa29.91■■■□□ 2.38
PRKCSH-213ENST00000591510 RSF1Q96T23 1441 aaPredicted RBP29.79■■■□□ 2.36
PRKCSH-213ENST00000591510 WIZO95785 1651 aa29.76■■■□□ 2.35
PRKCSH-213ENST00000591510 BAZ1BQ9UIG0 1483 aaKnown RBP29.75■■■□□ 2.35
PRKCSH-213ENST00000591510 TOP2AP11388 1531 aaKnown RBP29.46■■■□□ 2.31
PRKCSH-213ENST00000591510 NESP48681 1621 aa29.24■■■□□ 2.27
PRKCSH-213ENST00000591510 LAMC3Q9Y6N6 1575 aa29.18■■■□□ 2.26
PRKCSH-213ENST00000591510 CADPSQ9ULU8 1353 aa29.11■■■□□ 2.25
PRKCSH-213ENST00000591510 CCDC88BA6NC98 1476 aa29.1■■■□□ 2.25
PRKCSH-213ENST00000591510 CFTRP13569 1480 aa29.02■■■□□ 2.24
PRKCSH-213ENST00000591510 ERCC6Q03468 1493 aa28.94■■■□□ 2.22
PRKCSH-213ENST00000591510 SUPT5HO00267 1087 aaKnown RBP28.94■■■□□ 2.22
PRKCSH-213ENST00000591510 KIF21AQ7Z4S6 1674 aa28.91■■■□□ 2.22
PRKCSH-213ENST00000591510 PDS5BQ9NTI5 1447 aa28.91■■■□□ 2.22
PRKCSH-213ENST00000591510 THOC2Q8NI27 1593 aaKnown RBP28.83■■■□□ 2.21
PRKCSH-213ENST00000591510 PRDM2Q13029 1718 aa28.83■■■□□ 2.21
PRKCSH-213ENST00000591510 FANCD2Q9BXW9 1451 aa28.78■■■□□ 2.2
PRKCSH-213ENST00000591510 CEP164Q9UPV0 1460 aa28.71■■■□□ 2.19
PRKCSH-213ENST00000591510 CUX2O14529 1486 aa28.69■■■□□ 2.18
PRKCSH-213ENST00000591510 MRC2Q9UBG0 1479 aa28.66■■■□□ 2.18
PRKCSH-213ENST00000591510 WDR62O43379 1518 aa28.61■■■□□ 2.17
PRKCSH-213ENST00000591510 URB2Q14146 1524 aaKnown RBP28.53■■■□□ 2.16
PRKCSH-213ENST00000591510 TOPBP1Q92547 1522 aa28.36■■■□□ 2.13
PRKCSH-213ENST00000591510 DNMBPQ6XZF7 1577 aa28.34■■■□□ 2.13
PRKCSH-213ENST00000591510 ABCC8Q09428 1581 aa28.3■■■□□ 2.12
PRKCSH-213ENST00000591510 CUX1P39880 1505 aa28.23■■■□□ 2.11
PRKCSH-213ENST00000591510 POLA1P09884 1462 aaPredicted RBP28.14■■■□□ 2.09
PRKCSH-213ENST00000591510 IFT140Q96RY7 1462 aa28.11■■■□□ 2.09
PRKCSH-213ENST00000591510 TARBP1Q13395 1621 aaKnown RBP28.1■■■□□ 2.09
PRKCSH-213ENST00000591510 FGD5Q6ZNL6 1462 aa28.07■■■□□ 2.08
PRKCSH-213ENST00000591510 BIVM-ERCC5R4GMW8 1640 aa28.03■■■□□ 2.08
PRKCSH-213ENST00000591510 SYNJ1O43426 1573 aa28.03■■■□□ 2.08
PRKCSH-213ENST00000591510 WRNQ14191 1432 aaPredicted RBP eCLIP28.02■■■□□ 2.08
PRKCSH-213ENST00000591510 TOP2BQ02880 1626 aa28.02■■■□□ 2.08
PRKCSH-213ENST00000591510 ZNF608Q9ULD9 1512 aaPredicted RBP28.02■■■□□ 2.08
PRKCSH-213ENST00000591510 RAD54L2Q9Y4B4 1467 aa27.98■■■□□ 2.07
PRKCSH-213ENST00000591510 SOGA1O94964 1423 aa27.94■■■□□ 2.06
PRKCSH-213ENST00000591510 WDR97A6NE52 1622 aa27.92■■■□□ 2.06
PRKCSH-213ENST00000591510 EIF4G3O43432 1585 aaKnown RBP27.91■■■□□ 2.06
PRKCSH-213ENST00000591510 ABCA10Q8WWZ4 1543 aa27.83■■■□□ 2.05
PRKCSH-213ENST00000591510 AQRO60306 1485 aaKnown RBP eCLIP27.83■■■□□ 2.04
PRKCSH-213ENST00000591510 TDRD9Q8NDG6 1382 aaKnown RBP27.77■■■□□ 2.04
PRKCSH-213ENST00000591510 ABCA5Q8WWZ7 1642 aa27.74■■■□□ 2.03
PRKCSH-213ENST00000591510 GAPVD1Q14C86 1478 aa27.65■■■□□ 2.02
PRKCSH-213ENST00000591510 GRIN2BQ13224 1484 aa27.64■■■□□ 2.01
PRKCSH-213ENST00000591510 PBRM1Q86U86 1689 aa27.62■■■□□ 2.01
PRKCSH-213ENST00000591510 DNAJC5Q9H3Z4 198 aa27.59■■■□□ 2.01
PRKCSH-213ENST00000591510 SNAPC4Q5SXM2 1469 aa27.58■■■□□ 2.01
PRKCSH-213ENST00000591510 MAGI1Q96QZ7 1491 aaPredicted RBP27.57■■■□□ 2
PRKCSH-213ENST00000591510 CHD1O14646 1710 aa27.52■■■□□ 2
PRKCSH-213ENST00000591510 ERICH3Q5RHP9 1530 aa27.49■■□□□ 1.99
PRKCSH-213ENST00000591510 ADAMTS12P58397 1594 aa27.45■■□□□ 1.99
PRKCSH-213ENST00000591510 SYNJ2O15056 1496 aa27.44■■□□□ 1.98
PRKCSH-213ENST00000591510 OSCARQ8IYS5 282 aa27.41■■□□□ 1.98
PRKCSH-213ENST00000591510 KIF27Q86VH2 1401 aa27.4■■□□□ 1.98
PRKCSH-213ENST00000591510 FHAD1B1AJZ9 1412 aa27.34■■□□□ 1.97
PRKCSH-213ENST00000591510 IGF1RP08069 1367 aa27.34■■□□□ 1.97
PRKCSH-213ENST00000591510 TRIM41Q8WV44 630 aa27.33■■□□□ 1.97
PRKCSH-213ENST00000591510 GRIN2AQ12879 1464 aa27.3■■□□□ 1.96
PRKCSH-213ENST00000591510 FBLN2P98095 1184 aa27.29■■□□□ 1.96
PRKCSH-213ENST00000591510 CLASP1Q7Z460 1538 aa27.28■■□□□ 1.96
PRKCSH-213ENST00000591510 CHMP7Q8WUX9 453 aaPredicted RBP27.28■■□□□ 1.96
PRKCSH-213ENST00000591510 RUSC2Q8N2Y8 1516 aa27.27■■□□□ 1.96
PRKCSH-213ENST00000591510 CUL7Q14999 1698 aa27.25■■□□□ 1.95
PRKCSH-213ENST00000591510 NUP160Q12769 1436 aa27.22■■□□□ 1.95
PRKCSH-213ENST00000591510 CHIC1Q5VXU3 224 aa27.21■■□□□ 1.95
PRKCSH-213ENST00000591510 CEP170Q5SW79 1584 aa27.19■■□□□ 1.94
PRKCSH-213ENST00000591510 CARMIL1Q5VZK9 1371 aa27.12■■□□□ 1.93
PRKCSH-213ENST00000591510 ARHGEF11O15085 1522 aa27.09■■□□□ 1.93
PRKCSH-213ENST00000591510 RIMBP3CA6NJZ7 1639 aa27.08■■□□□ 1.93
PRKCSH-213ENST00000591510 RIMBP3BA6NNM3 1639 aa27.08■■□□□ 1.93
PRKCSH-213ENST00000591510 RIMBP3Q9UFD9 1639 aa27.08■■□□□ 1.93
PRKCSH-213ENST00000591510 SHROOM2Q13796 1616 aa27.02■■□□□ 1.92
PRKCSH-213ENST00000591510 PRXQ9BXM0 1461 aa27.01■■□□□ 1.91
PRKCSH-213ENST00000591510 RAPGEF2Q9Y4G8 1499 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms