RNA–Protein interactions for RNA: ENST00000455396.1

CRAT-205, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 3

Gene CRAT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-205ENST00000455396 NISCHQ9Y2I1 1504 aa31.5■■■□□ 2.63
CRAT-205ENST00000455396 ABCC9O60706 1549 aa28.91■■■□□ 2.22
CRAT-205ENST00000455396 CCDC180Q9P1Z9 1646 aa28.4■■■□□ 2.14
CRAT-205ENST00000455396 DNAJC5BQ9UF47 199 aa27.66■■■□□ 2.02
CRAT-205ENST00000455396 RB1CC1Q8TDY2 1594 aa27.32■■□□□ 1.96
CRAT-205ENST00000455396 NACADO15069 1562 aa27.07■■□□□ 1.92
CRAT-205ENST00000455396 PABPN1Q86U42 306 aaKnown RBP eCLIP26.87■■□□□ 1.89
CRAT-205ENST00000455396 DCAF8L2P0C7V8 631 aa26.72■■□□□ 1.87
CRAT-205ENST00000455396 MYO15BQ96JP2 1530 aa26.64■■□□□ 1.85
CRAT-205ENST00000455396 BICRAQ9NZM4 1560 aa26.54■■□□□ 1.84
CRAT-205ENST00000455396 UNC13AQ9UPW8 1703 aa26.49■■□□□ 1.83
CRAT-205ENST00000455396 SHROOM4Q9ULL8 1493 aa26.28■■□□□ 1.8
CRAT-205ENST00000455396 CECR2Q9BXF3 1484 aa26.16■■□□□ 1.78
CRAT-205ENST00000455396 CC2D2AQ9P2K1 1620 aa26.07■■□□□ 1.76
CRAT-205ENST00000455396 DCAF1Q9Y4B6 1507 aa26.07■■□□□ 1.76
CRAT-205ENST00000455396 ZCCHC6Q5VYS8 1495 aaKnown RBP26■■□□□ 1.75
CRAT-205ENST00000455396 EIF4G1Q04637 1599 aaKnown RBP25.94■■□□□ 1.74
CRAT-205ENST00000455396 DNAJC5Q9H3Z4 198 aa25.83■■□□□ 1.73
CRAT-205ENST00000455396 SCRIBQ14160 1630 aa25.78■■□□□ 1.72
CRAT-205ENST00000455396 CUX2O14529 1486 aa25.22■■□□□ 1.63
CRAT-205ENST00000455396 NCAPD3P42695 1498 aa25.07■■□□□ 1.6
CRAT-205ENST00000455396 ERCC6Q03468 1493 aa25.01■■□□□ 1.59
CRAT-205ENST00000455396 ATAD2BQ9ULI0 1458 aa24.86■■□□□ 1.57
CRAT-205ENST00000455396 HMGXB3Q12766 1538 aa24.76■■□□□ 1.55
CRAT-205ENST00000455396 SMARCA2P51531 1590 aa24.74■■□□□ 1.55
CRAT-205ENST00000455396 NESP48681 1621 aa24.68■■□□□ 1.54
CRAT-205ENST00000455396 SMARCA4P51532 1647 aa24.61■■□□□ 1.53
CRAT-205ENST00000455396 BAZ1BQ9UIG0 1483 aaKnown RBP24.54■■□□□ 1.52
CRAT-205ENST00000455396 THOC2Q8NI27 1593 aaKnown RBP24.53■■□□□ 1.52
CRAT-205ENST00000455396 LAMC3Q9Y6N6 1575 aa24.48■■□□□ 1.51
CRAT-205ENST00000455396 PEG3Q9GZU2 1588 aa24.47■■□□□ 1.51
CRAT-205ENST00000455396 BAZ1AQ9NRL2 1556 aaPredicted RBP24.47■■□□□ 1.51
CRAT-205ENST00000455396 PDS5BQ9NTI5 1447 aa24.43■■□□□ 1.5
CRAT-205ENST00000455396 TRIM41Q8WV44 630 aa24.33■■□□□ 1.49
CRAT-205ENST00000455396 CADPSQ9ULU8 1353 aa24.26■■□□□ 1.47
CRAT-205ENST00000455396 MROH2BQ7Z745 1585 aa24.23■■□□□ 1.47
CRAT-205ENST00000455396 KIF21AQ7Z4S6 1674 aa24.22■■□□□ 1.47
CRAT-205ENST00000455396 MRC2Q9UBG0 1479 aa24.19■■□□□ 1.46
CRAT-205ENST00000455396 WDR62O43379 1518 aa24.15■■□□□ 1.46
CRAT-205ENST00000455396 OSCARQ8IYS5 282 aa24.01■■□□□ 1.43
CRAT-205ENST00000455396 CEP164Q9UPV0 1460 aa23.98■■□□□ 1.43
CRAT-205ENST00000455396 FANCD2Q9BXW9 1451 aa23.92■■□□□ 1.42
CRAT-205ENST00000455396 CFTRP13569 1480 aa23.87■■□□□ 1.41
CRAT-205ENST00000455396 WIZO95785 1651 aa23.81■■□□□ 1.4
CRAT-205ENST00000455396 URB2Q14146 1524 aaKnown RBP23.74■■□□□ 1.39
CRAT-205ENST00000455396 RSF1Q96T23 1441 aaPredicted RBP23.61■■□□□ 1.37
CRAT-205ENST00000455396 RIMBP3CA6NJZ7 1639 aa23.59■■□□□ 1.37
CRAT-205ENST00000455396 RIMBP3BA6NNM3 1639 aa23.59■■□□□ 1.37
CRAT-205ENST00000455396 RIMBP3Q9UFD9 1639 aa23.59■■□□□ 1.37
CRAT-205ENST00000455396 TOP2AP11388 1531 aaKnown RBP23.58■■□□□ 1.36
CRAT-205ENST00000455396 IFT140Q96RY7 1462 aa23.56■■□□□ 1.36
CRAT-205ENST00000455396 ARHGEF11O15085 1522 aa23.54■■□□□ 1.36
CRAT-205ENST00000455396 ZNF608Q9ULD9 1512 aaPredicted RBP23.52■■□□□ 1.36
CRAT-205ENST00000455396 CYB5RLQ6IPT4 315 aa23.42■■□□□ 1.34
CRAT-205ENST00000455396 TOPBP1Q92547 1522 aa23.4■■□□□ 1.34
CRAT-205ENST00000455396 ABCC8Q09428 1581 aa23.38■■□□□ 1.33
CRAT-205ENST00000455396 CCDC88BA6NC98 1476 aa23.35■■□□□ 1.33
CRAT-205ENST00000455396 PRDM2Q13029 1718 aa23.31■■□□□ 1.32
CRAT-205ENST00000455396 EIF4G3O43432 1585 aaKnown RBP23.3■■□□□ 1.32
CRAT-205ENST00000455396 ARAP1Q96P48 1450 aa23.29■■□□□ 1.32
CRAT-205ENST00000455396 TRHP20396 242 aaPredicted RBP23.28■■□□□ 1.32
CRAT-205ENST00000455396 AQRO60306 1485 aaKnown RBP eCLIP23.25■■□□□ 1.31
CRAT-205ENST00000455396 DNMBPQ6XZF7 1577 aa23.25■■□□□ 1.31
CRAT-205ENST00000455396 TARBP1Q13395 1621 aaKnown RBP23.19■■□□□ 1.3
CRAT-205ENST00000455396 FBLN2P98095 1184 aa23.17■■□□□ 1.3
CRAT-205ENST00000455396 POLA1P09884 1462 aaPredicted RBP23.13■■□□□ 1.29
CRAT-205ENST00000455396 CHD1O14646 1710 aa23.12■■□□□ 1.29
CRAT-205ENST00000455396 SOGA1O94964 1423 aa23.05■■□□□ 1.28
CRAT-205ENST00000455396 TDRD9Q8NDG6 1382 aaKnown RBP23.04■■□□□ 1.28
CRAT-205ENST00000455396 RAD54L2Q9Y4B4 1467 aa23.03■■□□□ 1.28
CRAT-205ENST00000455396 CLASP1Q7Z460 1538 aa23.03■■□□□ 1.28
CRAT-205ENST00000455396 CHMP7Q8WUX9 453 aaPredicted RBP22.99■■□□□ 1.27
CRAT-205ENST00000455396 WDR97A6NE52 1622 aa22.99■■□□□ 1.27
CRAT-205ENST00000455396 SNAPC4Q5SXM2 1469 aa22.98■■□□□ 1.27
CRAT-205ENST00000455396 AEBP2Q6ZN18 517 aaPredicted RBP22.98■■□□□ 1.27
CRAT-205ENST00000455396 MAGI1Q96QZ7 1491 aaPredicted RBP22.97■■□□□ 1.27
CRAT-205ENST00000455396 SYNJ1O43426 1573 aa22.93■■□□□ 1.26
CRAT-205ENST00000455396 GRIN2BQ13224 1484 aa22.91■■□□□ 1.26
CRAT-205ENST00000455396 SYNJ2O15056 1496 aa22.89■■□□□ 1.25
CRAT-205ENST00000455396 FGD5Q6ZNL6 1462 aa22.89■■□□□ 1.25
CRAT-205ENST00000455396 GAPVD1Q14C86 1478 aa22.82■■□□□ 1.24
CRAT-205ENST00000455396 CUX1P39880 1505 aa22.79■■□□□ 1.24
CRAT-205ENST00000455396 ABCA10Q8WWZ4 1543 aa22.67■■□□□ 1.22
CRAT-205ENST00000455396 ABCA5Q8WWZ7 1642 aa22.59■■□□□ 1.21
CRAT-205ENST00000455396 GRIN2AQ12879 1464 aa22.59■■□□□ 1.21
CRAT-205ENST00000455396 NUP160Q12769 1436 aa22.58■■□□□ 1.21
CRAT-205ENST00000455396 PBRM1Q86U86 1689 aa22.58■■□□□ 1.2
CRAT-205ENST00000455396 ERCC6L2Q5T890 1561 aa22.55■■□□□ 1.2
CRAT-205ENST00000455396 CEP170Q5SW79 1584 aa22.51■■□□□ 1.19
CRAT-205ENST00000455396 WRNQ14191 1432 aaPredicted RBP eCLIP22.48■■□□□ 1.19
CRAT-205ENST00000455396 FHAD1B1AJZ9 1412 aa22.47■■□□□ 1.19
CRAT-205ENST00000455396 ADAMTS12P58397 1594 aa22.46■■□□□ 1.19
CRAT-205ENST00000455396 SHROOM2Q13796 1616 aa22.45■■□□□ 1.18
CRAT-205ENST00000455396 JPH4Q96JJ6 628 aa22.36■■□□□ 1.17
CRAT-205ENST00000455396 PRG4Q92954 1404 aaPredicted RBP22.36■■□□□ 1.17
CRAT-205ENST00000455396 ERICH3Q5RHP9 1530 aa22.36■■□□□ 1.17
CRAT-205ENST00000455396 ABCC10Q5T3U5 1492 aa22.33■■□□□ 1.16
CRAT-205ENST00000455396 FAM69CQ0P6D2 419 aa22.31■■□□□ 1.16
CRAT-205ENST00000455396 KIF13AQ9H1H9 1805 aa22.29■■□□□ 1.16
CRAT-205ENST00000455396 TOP2BQ02880 1626 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms