Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 U62317.3-201ENST00000608319 855 ntBASIC12.5□□□□□ -0.41
SCN2BO60939 AP000322.3-201ENST00000608665 388 ntBASIC12.5□□□□□ -0.41
SCN2BO60939 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SCN2BO60939 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC12.5□□□□□ -0.41
SCN2BO60939 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SCN2BO60939 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC12.5□□□□□ -0.41
SCN2BO60939 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SCN2BO60939 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SCN2BO60939 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SCN2BO60939 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SCN2BO60939 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SCN2BO60939 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SCN2BO60939 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
SCN2BO60939 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SCN2BO60939 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SCN2BO60939 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCN2BO60939 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SCN2BO60939 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCN2BO60939 EDRF1-201ENST00000337623 4387 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
SCN2BO60939 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCN2BO60939 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC12.49□□□□□ -0.41
SCN2BO60939 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SCN2BO60939 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCN2BO60939 DGKZP1-201ENST00000378718 2776 ntBASIC12.49□□□□□ -0.41
SCN2BO60939 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
SCN2BO60939 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SCN2BO60939 TTC26-207ENST00000478836 1794 ntTSL 2 BASIC12.49□□□□□ -0.41
SCN2BO60939 SHMT2-205ENST00000553474 1765 ntTSL 2 BASIC12.49□□□□□ -0.41
SCN2BO60939 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC12.49□□□□□ -0.41
SCN2BO60939 AC244154.1-201ENST00000620148 1555 ntBASIC12.49□□□□□ -0.41
SCN2BO60939 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCN2BO60939 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SCN2BO60939 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCN2BO60939 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC12.49□□□□□ -0.41
SCN2BO60939 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCN2BO60939 RPL10-203ENST00000406022 748 ntTSL 3 BASIC12.49□□□□□ -0.41
SCN2BO60939 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC12.49□□□□□ -0.41
SCN2BO60939 FAM86FP-202ENST00000427893 829 ntTSL 5 BASIC12.49□□□□□ -0.41
SCN2BO60939 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SCN2BO60939 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC12.49□□□□□ -0.41
SCN2BO60939 DLK1-205ENST00000556051 469 ntTSL 2 BASIC12.49□□□□□ -0.41
SCN2BO60939 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC12.49□□□□□ -0.41
SCN2BO60939 ACTBP9-201ENST00000587663 1099 ntBASIC12.49□□□□□ -0.41
SCN2BO60939 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC12.49□□□□□ -0.41
SCN2BO60939 AL136982.5-201ENST00000605222 294 ntBASIC12.49□□□□□ -0.41
SCN2BO60939 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC12.49□□□□□ -0.41
SCN2BO60939 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
SCN2BO60939 PPP1CB-201ENST00000296122 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCN2BO60939 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SCN2BO60939 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCN2BO60939 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCN2BO60939 FAM177A1-201ENST00000280987 2927 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCN2BO60939 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC12.49□□□□□ -0.41
SCN2BO60939 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCN2BO60939 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
SCN2BO60939 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SCN2BO60939 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SCN2BO60939 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SCN2BO60939 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
SCN2BO60939 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC12.49□□□□□ -0.41
SCN2BO60939 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCN2BO60939 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC12.49□□□□□ -0.41
SCN2BO60939 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCN2BO60939 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SCN2BO60939 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SCN2BO60939 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCN2BO60939 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCN2BO60939 LINC02465-203ENST00000513875 1777 ntTSL 5 BASIC12.48□□□□□ -0.41
SCN2BO60939 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCN2BO60939 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCN2BO60939 AC007598.3-201ENST00000623077 1678 ntBASIC12.48□□□□□ -0.41
SCN2BO60939 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC12.48□□□□□ -0.41
SCN2BO60939 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC12.48□□□□□ -0.41
SCN2BO60939 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SCN2BO60939 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SCN2BO60939 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SCN2BO60939 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SCN2BO60939 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC12.48□□□□□ -0.41
SCN2BO60939 VPS26A-203ENST00000395098 2554 ntTSL 5 BASIC12.48□□□□□ -0.41
SCN2BO60939 AC034205.3-201ENST00000603595 1376 ntBASIC12.48□□□□□ -0.41
SCN2BO60939 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCN2BO60939 C10orf90-201ENST00000284694 3076 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCN2BO60939 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCN2BO60939 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
SCN2BO60939 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCN2BO60939 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCN2BO60939 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SCN2BO60939 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCN2BO60939 PMF1-201ENST00000368273 884 ntTSL 2 BASIC12.48□□□□□ -0.41
SCN2BO60939 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SCN2BO60939 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCN2BO60939 AP000356.3-201ENST00000382243 753 ntBASIC12.48□□□□□ -0.41
SCN2BO60939 AC026316.1-201ENST00000398900 414 ntBASIC12.48□□□□□ -0.41
SCN2BO60939 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCN2BO60939 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SCN2BO60939 DPY19L2P5-201ENST00000456300 331 ntBASIC12.48□□□□□ -0.41
SCN2BO60939 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC12.48□□□□□ -0.41
SCN2BO60939 IGHVII-33-1-201ENST00000524010 280 ntBASIC12.48□□□□□ -0.41
SCN2BO60939 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
SCN2BO60939 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms