Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
AP1S3Q96PC3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
AP1S3Q96PC3 NFIC-211ENST00000641145 8399 ntBASIC16.59■□□□□ 0.25
AP1S3Q96PC3 AC092068.2-201ENST00000590491 1708 ntBASIC16.59■□□□□ 0.25
AP1S3Q96PC3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.59■□□□□ 0.25
AP1S3Q96PC3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC16.59■□□□□ 0.25
AP1S3Q96PC3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP1S3Q96PC3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP1S3Q96PC3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AP1S3Q96PC3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP1S3Q96PC3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP1S3Q96PC3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
AP1S3Q96PC3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC16.59■□□□□ 0.25
AP1S3Q96PC3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP1S3Q96PC3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP1S3Q96PC3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP1S3Q96PC3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
AP1S3Q96PC3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP1S3Q96PC3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
AP1S3Q96PC3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
AP1S3Q96PC3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC16.58■□□□□ 0.24
AP1S3Q96PC3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC16.58■□□□□ 0.24
AP1S3Q96PC3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP1S3Q96PC3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC16.58■□□□□ 0.24
AP1S3Q96PC3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
AP1S3Q96PC3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
AP1S3Q96PC3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
AP1S3Q96PC3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
AP1S3Q96PC3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.57■□□□□ 0.24
AP1S3Q96PC3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.57■□□□□ 0.24
AP1S3Q96PC3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S3Q96PC3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.57■□□□□ 0.24
AP1S3Q96PC3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S3Q96PC3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S3Q96PC3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S3Q96PC3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S3Q96PC3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S3Q96PC3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.57■□□□□ 0.24
AP1S3Q96PC3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S3Q96PC3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S3Q96PC3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC16.57■□□□□ 0.24
AP1S3Q96PC3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
AP1S3Q96PC3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
AP1S3Q96PC3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.57■□□□□ 0.24
AP1S3Q96PC3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.56■□□□□ 0.24
AP1S3Q96PC3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
AP1S3Q96PC3 DUSP8P3-201ENST00000399571 1760 ntBASIC16.56■□□□□ 0.24
AP1S3Q96PC3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S3Q96PC3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S3Q96PC3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S3Q96PC3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
AP1S3Q96PC3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.56■□□□□ 0.24
AP1S3Q96PC3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S3Q96PC3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S3Q96PC3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S3Q96PC3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S3Q96PC3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
AP1S3Q96PC3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
AP1S3Q96PC3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S3Q96PC3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S3Q96PC3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S3Q96PC3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
AP1S3Q96PC3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S3Q96PC3 AC090877.2-201ENST00000558441 1738 ntBASIC16.56■□□□□ 0.24
AP1S3Q96PC3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S3Q96PC3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.56■□□□□ 0.24
AP1S3Q96PC3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S3Q96PC3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S3Q96PC3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S3Q96PC3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
AP1S3Q96PC3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S3Q96PC3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S3Q96PC3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC16.55■□□□□ 0.24
AP1S3Q96PC3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
AP1S3Q96PC3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S3Q96PC3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
AP1S3Q96PC3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC16.55■□□□□ 0.24
AP1S3Q96PC3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S3Q96PC3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S3Q96PC3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
AP1S3Q96PC3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
AP1S3Q96PC3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC16.55■□□□□ 0.24
AP1S3Q96PC3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S3Q96PC3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S3Q96PC3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S3Q96PC3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S3Q96PC3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
AP1S3Q96PC3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S3Q96PC3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S3Q96PC3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S3Q96PC3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S3Q96PC3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S3Q96PC3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
AP1S3Q96PC3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
AP1S3Q96PC3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S3Q96PC3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
AP1S3Q96PC3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S3Q96PC3 MIR639-201ENST00000384974 98 ntBASIC16.54■□□□□ 0.24
AP1S3Q96PC3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC16.54■□□□□ 0.24
AP1S3Q96PC3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms