Protein–RNA interactions for Protein: Q01844

EWSR1, RNA-binding protein EWS, humanhuman

Known RBP eCLIP

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1Q01844 TBCD-225ENST00000576996 827 ntTSL 510.63□□□□□ -0.712e-6■■■■□ 20.7
EWSR1Q01844 TBCD-206ENST00000571712 850 ntTSL 58.14□□□□□ -1.112e-6■■■■□ 20.7
EWSR1Q01844 TBCD-219ENST00000576160 942 ntTSL 57.67□□□□□ -1.182e-6■■■■□ 20.7
EWSR1Q01844 GATA2-205ENST00000492608 844 ntTSL 314.33□□□□□ -0.121e-6■■■■□ 20.6
EWSR1Q01844 KCNIP2-209ENST00000434163 534 ntTSL 1 (best)8.35□□□□□ -1.076e-7■■■■□ 20.6
EWSR1Q01844 SH3BP2-215ENST00000510074 649 ntTSL 511.86□□□□□ -0.518e-7■■■■□ 20.6
EWSR1Q01844 SH3BP2-219ENST00000511237 517 ntTSL 511.86□□□□□ -0.518e-7■■■■□ 20.6
EWSR1Q01844 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC11.03□□□□□ -0.647e-7■■■■□ 20.6
EWSR1Q01844 SH3BP2-208ENST00000504294 557 ntTSL 510.93□□□□□ -0.668e-7■■■■□ 20.6
EWSR1Q01844 SPRED2-205ENST00000440972 555 ntTSL 39.49□□□□□ -0.897e-7■■■■□ 20.6
EWSR1Q01844 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.18□□□□□ -0.468e-7■■■■□ 20.6
EWSR1Q01844 HOXC9-202ENST00000504557 581 ntTSL 310.47□□□□□ -0.733e-6■■■■□ 20.6
EWSR1Q01844 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC10.54□□□□□ -0.726e-7■■■■□ 20.6
EWSR1Q01844 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.183e-13■■■■□ 20.6
EWSR1Q01844 KDM6B-206ENST00000575521 219 ntTSL 510.67□□□□□ -0.79e-7■■■■□ 20.6
EWSR1Q01844 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.8□□□□□ -0.363e-6■■■■□ 20.6
EWSR1Q01844 KCNH2-204ENST00000461280 2430 ntTSL 1 (best)16.64■□□□□ 0.255e-8■■■■□ 20.6
EWSR1Q01844 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.54■□□□□ 0.245e-8■■■■□ 20.6
EWSR1Q01844 KCNH2-205ENST00000473610 2782 ntTSL 215.71■□□□□ 0.115e-8■■■■□ 20.6
EWSR1Q01844 CORO7-223ENST00000574311 1737 ntTSL 514.21□□□□□ -0.132e-6■■■■□ 20.5
EWSR1Q01844 CORO7-211ENST00000572044 563 ntTSL 414.18□□□□□ -0.142e-6■■■■□ 20.5
EWSR1Q01844 CORO7-209ENST00000571756 1890 ntTSL 213.23□□□□□ -0.292e-6■■■■□ 20.5
EWSR1Q01844 CORO7-216ENST00000572549 663 ntTSL 513.2□□□□□ -0.32e-6■■■■□ 20.5
EWSR1Q01844 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.6□□□□□ -0.392e-6■■■■□ 20.5
EWSR1Q01844 CORO7-230ENST00000576437 1066 ntTSL 512.45□□□□□ -0.422e-6■■■■□ 20.5
EWSR1Q01844 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.422e-6■■■■□ 20.5
EWSR1Q01844 CORO7-227ENST00000575714 2978 ntTSL 511.68□□□□□ -0.542e-6■■■■□ 20.5
EWSR1Q01844 CORO7-202ENST00000537233 3392 ntTSL 2 BASIC10.83□□□□□ -0.682e-6■■■■□ 20.5
EWSR1Q01844 CORO7-208ENST00000571227 3578 ntTSL 510.79□□□□□ -0.682e-6■■■■□ 20.5
EWSR1Q01844 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.345e-7■■■■□ 20.5
EWSR1Q01844 CXXC5-209ENST00000507139 472 ntTSL 416.02■□□□□ 0.165e-7■■■■□ 20.5
EWSR1Q01844 CXXC5-206ENST00000504844 777 ntTSL 215.55■□□□□ 0.085e-7■■■■□ 20.5
EWSR1Q01844 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.015e-7■■■■□ 20.5
EWSR1Q01844 CXXC5-203ENST00000502336 581 ntTSL 414.56□□□□□ -0.085e-7■■■■□ 20.5
EWSR1Q01844 CXXC5-202ENST00000502295 503 ntTSL 412.05□□□□□ -0.485e-7■■■■□ 20.5
EWSR1Q01844 CXXC5-216ENST00000520967 878 ntTSL 311.66□□□□□ -0.545e-7■■■■□ 20.5
EWSR1Q01844 CXXC5-207ENST00000504944 568 ntTSL 310.82□□□□□ -0.685e-7■■■■□ 20.5
EWSR1Q01844 AC073111.4-201ENST00000483664 582 ntTSL 49.58□□□□□ -0.882e-6■■■■□ 20.5
EWSR1Q01844 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.75■□□□□ 0.112e-6■■■■□ 20.5
EWSR1Q01844 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.022e-6■■■■□ 20.5
EWSR1Q01844 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.77□□□□□ -0.052e-6■■■■□ 20.5
EWSR1Q01844 PAK4-204ENST00000593480 714 ntTSL 314.61□□□□□ -0.072e-6■■■■□ 20.5
EWSR1Q01844 PAK4-212ENST00000602004 564 ntTSL 413.8□□□□□ -0.22e-6■■■■□ 20.5
EWSR1Q01844 PAK4-207ENST00000597766 380 ntTSL 313.46□□□□□ -0.252e-6■■■■□ 20.5
EWSR1Q01844 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.33□□□□□ -0.272e-6■■■■□ 20.5
EWSR1Q01844 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.32e-6■■■■□ 20.5
EWSR1Q01844 SRRM2-222ENST00000575009 1146 ntTSL 519.16■□□□□ 0.669e-14■■■■□ 20.5
EWSR1Q01844 SRRM2-229ENST00000576894 2210 ntTSL 1 (best)17.66■□□□□ 0.429e-14■■■■□ 20.5
EWSR1Q01844 SRRM2-230ENST00000576924 3314 ntTSL 1 (best)14.47□□□□□ -0.099e-14■■■■□ 20.5
EWSR1Q01844 SRRM2-225ENST00000576076 914 nt13.18□□□□□ -0.39e-14■■■■□ 20.5
EWSR1Q01844 SRRM2-208ENST00000571378 2870 ntTSL 1 (best)12.52□□□□□ -0.49e-14■■■■□ 20.5
EWSR1Q01844 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC10.2□□□□□ -0.789e-14■■■■□ 20.5
EWSR1Q01844 SRRM2-212ENST00000572952 1118 ntTSL 29.92□□□□□ -0.829e-14■■■■□ 20.5
EWSR1Q01844 SRRM2-209ENST00000572278 711 ntTSL 28.08□□□□□ -1.129e-14■■■■□ 20.5
EWSR1Q01844 SRRM2-215ENST00000573498 994 ntTSL 34.49□□□□□ -1.699e-14■■■■□ 20.5
EWSR1Q01844 EEF1D-239ENST00000531670 926 ntTSL 311.51□□□□□ -0.576e-8■■■■□ 20.5
EWSR1Q01844 RNF126-204ENST00000590885 1436 ntTSL 513.84□□□□□ -0.195e-7■■■■□ 20.5
EWSR1Q01844 CBX4-204ENST00000495122 490 ntTSL 313.43□□□□□ -0.261e-6■■■■□ 20.5
EWSR1Q01844 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.492e-6■■■■□ 20.5
EWSR1Q01844 NFE2L2-205ENST00000430047 451 ntTSL 317.51■□□□□ 0.393e-6■■■■□ 20.5
EWSR1Q01844 RAB1A-205ENST00000494188 771 ntTSL 217.04■□□□□ 0.321e-7■■■■□ 20.5
EWSR1Q01844 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.18■□□□□ 0.181e-7■■■■□ 20.5
EWSR1Q01844 ZFYVE21-203ENST00000553512 636 ntTSL 515.87■□□□□ 0.132e-6■■■■□ 20.5
EWSR1Q01844 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.71■□□□□ 0.111e-7■■■■□ 20.5
EWSR1Q01844 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.192e-6■■■■□ 20.5
EWSR1Q01844 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.76□□□□□ -0.213e-6■■■■□ 20.5
EWSR1Q01844 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.251e-7■■■■□ 20.5
EWSR1Q01844 ZFYVE21-205ENST00000554255 570 ntTSL 212.52□□□□□ -0.412e-6■■■■□ 20.5
EWSR1Q01844 NFE2L2-210ENST00000462023 521 ntTSL 211.52□□□□□ -0.573e-6■■■■□ 20.5
EWSR1Q01844 ZFYVE21-210ENST00000556610 364 ntTSL 511.25□□□□□ -0.612e-6■■■■□ 20.5
EWSR1Q01844 ZFYVE21-206ENST00000554630 566 ntTSL 211.2□□□□□ -0.622e-6■■■■□ 20.5
EWSR1Q01844 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC10.63□□□□□ -0.711e-7■■■■□ 20.5
EWSR1Q01844 NFE2L2-211ENST00000464747 2749 ntTSL 2 BASIC8.71□□□□□ -1.023e-6■■■■□ 20.5
EWSR1Q01844 NFE2L2-214ENST00000588123 814 ntTSL 56.98□□□□□ -1.293e-6■■■■□ 20.5
EWSR1Q01844 NFE2L2-213ENST00000586532 942 ntTSL 53.22□□□□□ -1.893e-6■■■■□ 20.5
EWSR1Q01844 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.164e-7■■■■□ 20.5
EWSR1Q01844 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.396e-7■■■■□ 20.5
EWSR1Q01844 MAD1L1-212ENST00000450235 850 ntTSL 312.58□□□□□ -0.46e-7■■■■□ 20.5
EWSR1Q01844 HMGN2-202ENST00000460563 1045 ntTSL 58.08□□□□□ -1.122e-9■■■■□ 20.4
EWSR1Q01844 HMGN2-204ENST00000464888 565 ntTSL 27.83□□□□□ -1.162e-9■■■■□ 20.4
EWSR1Q01844 HMGN2-203ENST00000463817 853 ntTSL 26.86□□□□□ -1.312e-9■■■■□ 20.4
EWSR1Q01844 HMGN2-208ENST00000479815 1030 ntTSL 56.86□□□□□ -1.312e-9■■■■□ 20.4
EWSR1Q01844 HMGN2-206ENST00000467700 932 ntTSL 25.54□□□□□ -1.522e-9■■■■□ 20.4
EWSR1Q01844 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.532e-9■■■■□ 20.4
EWSR1Q01844 HMGN2-207ENST00000468388 320 ntTSL 35.06□□□□□ -1.62e-9■■■■□ 20.4
EWSR1Q01844 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.642e-9■■■■□ 20.4
EWSR1Q01844 SPPL2B-204ENST00000587851 586 ntTSL 315.85■□□□□ 0.131e-6■■■■□ 20.4
EWSR1Q01844 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.061e-6■■■■□ 20.4
EWSR1Q01844 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.83□□□□□ -0.357e-7■■■■□ 20.4
EWSR1Q01844 ATXN2-204ENST00000392645 2842 ntTSL 212.14□□□□□ -0.472e-7■■■■□ 20.4
EWSR1Q01844 NUMBL-208ENST00000599594 393 ntTSL 518.42■□□□□ 0.547e-7■■■■□ 20.4
EWSR1Q01844 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.097e-7■■■■□ 20.4
EWSR1Q01844 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.347e-7■■■■□ 20.4
EWSR1Q01844 NUMBL-204ENST00000595741 559 ntTSL 412.64□□□□□ -0.397e-7■■■■□ 20.4
EWSR1Q01844 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.48□□□□□ -0.413e-8■■■■□ 20.4
EWSR1Q01844 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.34e-7■■■■□ 20.4
EWSR1Q01844 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.023e-6■■■■□ 20.4
EWSR1Q01844 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.26□□□□□ -0.133e-6■■■■□ 20.4
EWSR1Q01844 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.38□□□□□ -0.273e-6■■■■□ 20.4
EWSR1Q01844 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.273e-6■■■■□ 20.4
Retrieved 100 of 7,101 protein–RNA pairs in 73.7 ms