Protein–RNA interactions for Protein: P60059

SEC61G, Protein transport protein Sec61 subunit gamma, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61GP60059 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SEC61GP60059 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SEC61GP60059 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
SEC61GP60059 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61GP60059 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61GP60059 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61GP60059 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC12.32□□□□□ -0.44
SEC61GP60059 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61GP60059 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61GP60059 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
SEC61GP60059 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SEC61GP60059 FLJ16779-201ENST00000612722 7638 ntBASIC12.32□□□□□ -0.44
SEC61GP60059 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61GP60059 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61GP60059 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61GP60059 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61GP60059 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61GP60059 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61GP60059 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61GP60059 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61GP60059 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
SEC61GP60059 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SEC61GP60059 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61GP60059 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61GP60059 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61GP60059 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61GP60059 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61GP60059 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61GP60059 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61GP60059 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61GP60059 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61GP60059 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61GP60059 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61GP60059 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61GP60059 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61GP60059 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SEC61GP60059 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61GP60059 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SEC61GP60059 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61GP60059 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC12.3□□□□□ -0.44
SEC61GP60059 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SEC61GP60059 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SEC61GP60059 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61GP60059 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61GP60059 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61GP60059 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61GP60059 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61GP60059 AL391005.1-201ENST00000623953 2435 ntBASIC12.3□□□□□ -0.44
SEC61GP60059 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC12.3□□□□□ -0.44
SEC61GP60059 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
SEC61GP60059 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61GP60059 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61GP60059 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61GP60059 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SEC61GP60059 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SEC61GP60059 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61GP60059 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61GP60059 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61GP60059 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61GP60059 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61GP60059 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SEC61GP60059 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SEC61GP60059 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC12.29□□□□□ -0.44
SEC61GP60059 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
SEC61GP60059 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61GP60059 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SEC61GP60059 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
SEC61GP60059 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SEC61GP60059 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61GP60059 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SEC61GP60059 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61GP60059 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61GP60059 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC12.28□□□□□ -0.44
SEC61GP60059 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61GP60059 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61GP60059 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61GP60059 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61GP60059 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC12.28□□□□□ -0.44
SEC61GP60059 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61GP60059 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC12.28□□□□□ -0.44
SEC61GP60059 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61GP60059 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC12.28□□□□□ -0.44
SEC61GP60059 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61GP60059 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61GP60059 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61GP60059 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61GP60059 AC142381.3-201ENST00000568208 1670 ntBASIC12.28□□□□□ -0.44
SEC61GP60059 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61GP60059 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC12.28□□□□□ -0.44
SEC61GP60059 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61GP60059 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SEC61GP60059 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SEC61GP60059 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SEC61GP60059 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
SEC61GP60059 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SEC61GP60059 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC12.27□□□□□ -0.45
SEC61GP60059 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
SEC61GP60059 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SEC61GP60059 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC12.27□□□□□ -0.45
SEC61GP60059 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms